RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 ARID3CA6NKF2 412 aa7.91□□□□□ -1.14
TCF4-218ENST00000563686 NCAPD3P42695 1498 aa7.9□□□□□ -1.15
TCF4-218ENST00000563686 DHX57Q6P158 1386 aaKnown RBP7.89□□□□□ -1.15
TCF4-218ENST00000563686 CNGB1Q14028 1251 aaPredicted RBP7.89□□□□□ -1.15
TCF4-218ENST00000563686 CUX1P39880 1505 aa7.89□□□□□ -1.15
TCF4-218ENST00000563686 RAB3GAP2Q9H2M9 1393 aa7.89□□□□□ -1.15
TCF4-218ENST00000563686 CADPSQ9ULU8 1353 aa7.89□□□□□ -1.15
TCF4-218ENST00000563686 ZNF326Q5BKZ1 582 aaKnown RBP7.88□□□□□ -1.15
TCF4-218ENST00000563686 FMN1Q68DA7 1419 aa7.87□□□□□ -1.15
TCF4-218ENST00000563686 CHIC2Q9UKJ5 165 aa7.87□□□□□ -1.15
TCF4-218ENST00000563686 FGD5Q6ZNL6 1462 aa7.87□□□□□ -1.15
TCF4-218ENST00000563686 FANCD2Q9BXW9 1451 aa7.87□□□□□ -1.15
TCF4-218ENST00000563686 MYT1LQ9UL68 1186 aa7.87□□□□□ -1.15
TCF4-218ENST00000563686 FBLN2P98095 1184 aa7.86□□□□□ -1.15
TCF4-218ENST00000563686 ZNF777Q9ULD5 760 aaPredicted RBP7.86□□□□□ -1.15
TCF4-218ENST00000563686 TIMELESSQ9UNS1 1208 aa7.85□□□□□ -1.15
TCF4-218ENST00000563686 RRBP1Q9P2E9 1410 aaKnown RBP7.85□□□□□ -1.15
TCF4-218ENST00000563686 CFTRP13569 1480 aa7.85□□□□□ -1.15
TCF4-218ENST00000563686 DAXXQ9UER7 740 aaPredicted RBP7.84□□□□□ -1.15
TCF4-218ENST00000563686 FHOD3Q2V2M9 1422 aa7.84□□□□□ -1.15
TCF4-218ENST00000563686 RRP7BPQ9NSQ0 103 aa7.84□□□□□ -1.15
TCF4-218ENST00000563686 HNRNPUQ00839 825 aaKnown RBP eCLIP7.84□□□□□ -1.15
TCF4-218ENST00000563686 SIN3AQ96ST3 1273 aa7.84□□□□□ -1.15
TCF4-218ENST00000563686 SUPT16HQ9Y5B9 1047 aaKnown RBP7.84□□□□□ -1.15
TCF4-218ENST00000563686 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
TCF4-218ENST00000563686 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
TCF4-218ENST00000563686 PDS5BQ9NTI5 1447 aa7.83□□□□□ -1.16
TCF4-218ENST00000563686 EFCAB5A4FU69 1503 aa7.83□□□□□ -1.16
TCF4-218ENST00000563686 TIAM1Q13009 1591 aa7.83□□□□□ -1.16
TCF4-218ENST00000563686 LRRC9Q6ZRR7 1453 aa7.82□□□□□ -1.16
TCF4-218ENST00000563686 EIF4G2P78344 907 aaKnown RBP eCLIP7.82□□□□□ -1.163e-7■■■■■ 40.1
TCF4-218ENST00000563686 FYCO1Q9BQS8 1478 aa7.81□□□□□ -1.16
TCF4-218ENST00000563686 HIRIP3Q9BW71 556 aaPredicted RBP7.81□□□□□ -1.16
TCF4-218ENST00000563686 CCER2I3L3R5 266 aa7.81□□□□□ -1.16
TCF4-218ENST00000563686 CUL7Q14999 1698 aa7.8□□□□□ -1.16
TCF4-218ENST00000563686 CCDC18Q5T9S5 1454 aa7.8□□□□□ -1.16
TCF4-218ENST00000563686 IGF1RP08069 1367 aa7.79□□□□□ -1.16
TCF4-218ENST00000563686 RTL5Q5HYW3 569 aaPredicted RBP7.79□□□□□ -1.16
TCF4-218ENST00000563686 FAM9BQ8IZU0 186 aa7.79□□□□□ -1.16
TCF4-218ENST00000563686 CC2D2AQ9P2K1 1620 aa7.79□□□□□ -1.16
TCF4-218ENST00000563686 DNMBPQ6XZF7 1577 aa7.79□□□□□ -1.16
TCF4-218ENST00000563686 CASKIN1Q8WXD9 1431 aa7.78□□□□□ -1.16
TCF4-218ENST00000563686 PCF11O94913 1555 aaKnown RBP7.78□□□□□ -1.16
TCF4-218ENST00000563686 CHMP7Q8WUX9 453 aaPredicted RBP7.77□□□□□ -1.17
TCF4-218ENST00000563686 RAD54L2Q9Y4B4 1467 aa7.77□□□□□ -1.17
TCF4-218ENST00000563686 ERCC6Q03468 1493 aa7.77□□□□□ -1.17
TCF4-218ENST00000563686 SLC4A1APQ9BWU0 796 aaKnown RBP7.77□□□□□ -1.17
TCF4-218ENST00000563686 EHBP1L1Q8N3D4 1523 aa7.76□□□□□ -1.17
TCF4-218ENST00000563686 MRS2Q9HD23 443 aa7.76□□□□□ -1.17
TCF4-218ENST00000563686 MAP3K1Q13233 1512 aa7.75□□□□□ -1.17
TCF4-218ENST00000563686 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
TCF4-218ENST00000563686 ANP32AP39687 249 aaKnown RBP7.75□□□□□ -1.17
TCF4-218ENST00000563686 HECW1Q76N89 1606 aa7.75□□□□□ -1.17
TCF4-218ENST00000563686 CFAP43Q8NDM7 1665 aa7.74□□□□□ -1.17
TCF4-218ENST00000563686 CTTNBP2Q8WZ74 1663 aa7.74□□□□□ -1.17
TCF4-218ENST00000563686 GAPVD1Q14C86 1478 aa7.74□□□□□ -1.17
TCF4-218ENST00000563686 PHLDB1Q86UU1 1377 aa7.73□□□□□ -1.17
TCF4-218ENST00000563686 FGD6Q6ZV73 1430 aa7.73□□□□□ -1.17
TCF4-218ENST00000563686 HSPA5P11021 654 aaKnown RBP7.73□□□□□ -1.17
TCF4-218ENST00000563686 TDRD9Q8NDG6 1382 aaKnown RBP7.72□□□□□ -1.17
TCF4-218ENST00000563686 TOPBP1Q92547 1522 aa7.72□□□□□ -1.17
TCF4-218ENST00000563686 CFDP1Q9UEE9 299 aaPredicted RBP7.72□□□□□ -1.17
TCF4-218ENST00000563686 IRX6P78412 446 aaPredicted RBP7.71□□□□□ -1.17
TCF4-218ENST00000563686 MYOM3Q5VTT5 1437 aa7.71□□□□□ -1.17
TCF4-218ENST00000563686 PPP1R15AO75807 674 aaPredicted RBP7.71□□□□□ -1.17
TCF4-218ENST00000563686 TSPY4P0CV99 314 aa7.71□□□□□ -1.18
TCF4-218ENST00000563686 TSPY10P0CW01 314 aa7.71□□□□□ -1.18
TCF4-218ENST00000563686 ANP32EQ9BTT0 268 aa7.71□□□□□ -1.18
TCF4-218ENST00000563686 TMC1Q8TDI8 760 aa7.71□□□□□ -1.18
TCF4-218ENST00000563686 AQRO60306 1485 aaKnown RBP eCLIP7.7□□□□□ -1.18
TCF4-218ENST00000563686 NCOA2Q15596 1464 aa7.7□□□□□ -1.18
TCF4-218ENST00000563686 PLEKHD1A6NEE1 506 aa7.7□□□□□ -1.18
TCF4-218ENST00000563686 ABCA10Q8WWZ4 1543 aa7.69□□□□□ -1.18
TCF4-218ENST00000563686 KDM2AQ9Y2K7 1162 aa7.69□□□□□ -1.18
TCF4-218ENST00000563686 MPHOSPH9Q99550 1183 aa7.69□□□□□ -1.18
TCF4-218ENST00000563686 UACAQ9BZF9 1416 aa7.69□□□□□ -1.18
TCF4-218ENST00000563686 LAMC3Q9Y6N6 1575 aa7.68□□□□□ -1.18
TCF4-218ENST00000563686 CARMIL2Q6F5E8 1435 aa7.68□□□□□ -1.18
TCF4-218ENST00000563686 CANXP27824 592 aaKnown RBP7.68□□□□□ -1.18
TCF4-218ENST00000563686 PPP4R2Q9NY27 417 aa7.68□□□□□ -1.18
TCF4-218ENST00000563686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.68□□□□□ -1.18
TCF4-218ENST00000563686 POLA1P09884 1462 aaPredicted RBP7.68□□□□□ -1.18
TCF4-218ENST00000563686 CCDC136Q96JN2 1154 aa7.67□□□□□ -1.18
TCF4-218ENST00000563686 PTPN23Q9H3S7 1636 aa7.67□□□□□ -1.18
TCF4-218ENST00000563686 KIF21AQ7Z4S6 1674 aa7.67□□□□□ -1.18
TCF4-218ENST00000563686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.66□□□□□ -1.18
TCF4-218ENST00000563686 CARD11Q9BXL7 1154 aa7.66□□□□□ -1.18
TCF4-218ENST00000563686 ANKRD30AQ9BXX3 1397 aa7.65□□□□□ -1.18
TCF4-218ENST00000563686 WDR97A6NE52 1622 aa7.65□□□□□ -1.18
TCF4-218ENST00000563686 NPM2Q86SE8 214 aaKnown RBP7.65□□□□□ -1.18
TCF4-218ENST00000563686 MRC2Q9UBG0 1479 aa7.65□□□□□ -1.18
TCF4-218ENST00000563686 THOC2Q8NI27 1593 aaKnown RBP7.65□□□□□ -1.18
TCF4-218ENST00000563686 NESP48681 1621 aa7.65□□□□□ -1.19
TCF4-218ENST00000563686 WDR43Q15061 677 aaKnown RBP eCLIP7.64□□□□□ -1.19
TCF4-218ENST00000563686 ERICH6BQ5W0A0 696 aa7.64□□□□□ -1.19
TCF4-218ENST00000563686 TSHZ2Q9NRE2 1034 aa7.64□□□□□ -1.19
TCF4-218ENST00000563686 FOXD1Q16676 465 aa7.63□□□□□ -1.19
TCF4-218ENST00000563686 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.63□□□□□ -1.19
TCF4-218ENST00000563686 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
TCF4-218ENST00000563686 HFM1A2PYH4 1435 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms