RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.13
CCP110-206ENST00000562616 NCAPD3P42695 1498 aa15.83■□□□□ 0.12
CCP110-206ENST00000562616 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
CCP110-206ENST00000562616 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
CCP110-206ENST00000562616 FBLN2P98095 1184 aa15.75■□□□□ 0.11
CCP110-206ENST00000562616 PLSCR2Q9NRY7 297 aa15.7■□□□□ 0.1
CCP110-206ENST00000562616 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
CCP110-206ENST00000562616 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
CCP110-206ENST00000562616 CUX2O14529 1486 aa15.61■□□□□ 0.09
CCP110-206ENST00000562616 ZNF692Q9BU19 519 aaPredicted RBP15.58■□□□□ 0.08
CCP110-206ENST00000562616 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
CCP110-206ENST00000562616 POTEIP0CG38 1075 aa15.56■□□□□ 0.08
CCP110-206ENST00000562616 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
CCP110-206ENST00000562616 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
CCP110-206ENST00000562616 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
CCP110-206ENST00000562616 CLCN6P51797 869 aa15.47■□□□□ 0.07
CCP110-206ENST00000562616 NESP48681 1621 aa15.46■□□□□ 0.07
CCP110-206ENST00000562616 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
CCP110-206ENST00000562616 CD44P16070 742 aaKnown RBP15.44■□□□□ 0.06
CCP110-206ENST00000562616 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
CCP110-206ENST00000562616 PLCB2Q00722 1185 aa15.41■□□□□ 0.06
CCP110-206ENST00000562616 CADPSQ9ULU8 1353 aa15.39■□□□□ 0.05
CCP110-206ENST00000562616 DCBLD2Q96PD2 775 aa15.35■□□□□ 0.05
CCP110-206ENST00000562616 CFTRP13569 1480 aa15.34■□□□□ 0.05
CCP110-206ENST00000562616 FBXO3Q9UK99 471 aa15.32■□□□□ 0.04
CCP110-206ENST00000562616 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
CCP110-206ENST00000562616 KIF21AQ7Z4S6 1674 aa15.31■□□□□ 0.04
CCP110-206ENST00000562616 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
CCP110-206ENST00000562616 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
CCP110-206ENST00000562616 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
CCP110-206ENST00000562616 FANCD2Q9BXW9 1451 aa15.25■□□□□ 0.03
CCP110-206ENST00000562616 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
CCP110-206ENST00000562616 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
CCP110-206ENST00000562616 BCANQ96GW7 911 aa15.19■□□□□ 0.02
CCP110-206ENST00000562616 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
CCP110-206ENST00000562616 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
CCP110-206ENST00000562616 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
CCP110-206ENST00000562616 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
CCP110-206ENST00000562616 POTEMA6NI47 508 aa15.12■□□□□ 0.01
CCP110-206ENST00000562616 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
CCP110-206ENST00000562616 WDR62O43379 1518 aa15.09■□□□□ 0.01
CCP110-206ENST00000562616 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
CCP110-206ENST00000562616 POTEGQ6S5H5 508 aa15.06■□□□□ 0
CCP110-206ENST00000562616 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
CCP110-206ENST00000562616 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
CCP110-206ENST00000562616 TOPBP1Q92547 1522 aa15.03■□□□□ -0
CCP110-206ENST00000562616 SPDYE4A6NLX3 237 aa15.02□□□□□ -0.01
CCP110-206ENST00000562616 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
CCP110-206ENST00000562616 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
CCP110-206ENST00000562616 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
CCP110-206ENST00000562616 VASPP50552 380 aaPredicted RBP15□□□□□ -0.01
CCP110-206ENST00000562616 PCDH10Q9P2E7 1040 aa14.99□□□□□ -0.01
CCP110-206ENST00000562616 CUX1P39880 1505 aa14.99□□□□□ -0.01
CCP110-206ENST00000562616 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
CCP110-206ENST00000562616 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
CCP110-206ENST00000562616 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
CCP110-206ENST00000562616 PRKCSHP14314 528 aaPredicted RBP14.93□□□□□ -0.02
CCP110-206ENST00000562616 FGD5Q6ZNL6 1462 aa14.92□□□□□ -0.02
CCP110-206ENST00000562616 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
CCP110-206ENST00000562616 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
CCP110-206ENST00000562616 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
CCP110-206ENST00000562616 PROM2Q8N271 834 aa14.9□□□□□ -0.02
CCP110-206ENST00000562616 IFT140Q96RY7 1462 aa14.87□□□□□ -0.03
CCP110-206ENST00000562616 CREBZFQ9NS37 354 aa14.87□□□□□ -0.03
CCP110-206ENST00000562616 RAD54L2Q9Y4B4 1467 aa14.86□□□□□ -0.03
CCP110-206ENST00000562616 TARBP1Q13395 1621 aaKnown RBP14.85□□□□□ -0.03
CCP110-206ENST00000562616 SOGA1O94964 1423 aa14.84□□□□□ -0.03
CCP110-206ENST00000562616 IFNLR1Q8IU57 520 aaPredicted RBP14.84□□□□□ -0.03
CCP110-206ENST00000562616 PAK3O75914 559 aaPredicted RBP14.83□□□□□ -0.04
CCP110-206ENST00000562616 ZNF608Q9ULD9 1512 aaPredicted RBP14.81□□□□□ -0.04
CCP110-206ENST00000562616 WDR97A6NE52 1622 aa14.8□□□□□ -0.04
CCP110-206ENST00000562616 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.8□□□□□ -0.04
CCP110-206ENST00000562616 PKD2Q13563 968 aa14.79□□□□□ -0.04
CCP110-206ENST00000562616 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
CCP110-206ENST00000562616 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
CCP110-206ENST00000562616 PHF12Q96QT6 1004 aa14.78□□□□□ -0.04
CCP110-206ENST00000562616 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.05
CCP110-206ENST00000562616 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
CCP110-206ENST00000562616 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.05
CCP110-206ENST00000562616 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
CCP110-206ENST00000562616 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
CCP110-206ENST00000562616 MAMSTRQ6ZN01 415 aa14.72□□□□□ -0.05
CCP110-206ENST00000562616 BBXQ8WY36 941 aaPredicted RBP14.72□□□□□ -0.05
CCP110-206ENST00000562616 METRNQ9UJH8 293 aa14.71□□□□□ -0.06
CCP110-206ENST00000562616 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
CCP110-206ENST00000562616 RIMBP3CA6NJZ7 1639 aa14.7□□□□□ -0.06
CCP110-206ENST00000562616 RIMBP3BA6NNM3 1639 aa14.7□□□□□ -0.06
CCP110-206ENST00000562616 RIMBP3Q9UFD9 1639 aa14.7□□□□□ -0.06
CCP110-206ENST00000562616 PBRM1Q86U86 1689 aa14.69□□□□□ -0.06
CCP110-206ENST00000562616 SLC39A7Q92504 469 aa14.68□□□□□ -0.06
CCP110-206ENST00000562616 C7P10643 843 aa14.68□□□□□ -0.06
CCP110-206ENST00000562616 GAPVD1Q14C86 1478 aa14.67□□□□□ -0.06
CCP110-206ENST00000562616 ASTLQ6HA08 431 aaPredicted RBP14.66□□□□□ -0.06
CCP110-206ENST00000562616 POTEJP0CG39 1038 aa14.65□□□□□ -0.06
CCP110-206ENST00000562616 GRIN2BQ13224 1484 aa14.65□□□□□ -0.06
CCP110-206ENST00000562616 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCP110-206ENST00000562616 LCE2DQ5TA82 110 aaPredicted RBP14.63□□□□□ -0.07
CCP110-206ENST00000562616 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
CCP110-206ENST00000562616 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
CCP110-206ENST00000562616 ARHGEF11O15085 1522 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms