RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 AEBP2Q6ZN18 517 aaPredicted RBP30.3■■■□□ 2.44
CCP110-206ENST00000562616 CHIC1Q5VXU3 224 aa28.39■■■□□ 2.14
CCP110-206ENST00000562616 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
CCP110-206ENST00000562616 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.68
CCP110-206ENST00000562616 FOXD1Q16676 465 aa24.34■■□□□ 1.49
CCP110-206ENST00000562616 POTEDQ86YR6 584 aa24■■□□□ 1.43
CCP110-206ENST00000562616 MSH5O43196 834 aa23.17■■□□□ 1.3
CCP110-206ENST00000562616 PIAS4Q8N2W9 510 aaPredicted RBP22.56■■□□□ 1.2
CCP110-206ENST00000562616 PPP6R1Q9UPN7 881 aa22.08■■□□□ 1.13
CCP110-206ENST00000562616 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
CCP110-206ENST00000562616 ADRA2BP18089 450 aa21.98■■□□□ 1.11
CCP110-206ENST00000562616 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
CCP110-206ENST00000562616 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
CCP110-206ENST00000562616 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
CCP110-206ENST00000562616 CACNB1Q02641 598 aaPredicted RBP20.38■□□□□ 0.85
CCP110-206ENST00000562616 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
CCP110-206ENST00000562616 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
CCP110-206ENST00000562616 RNF39Q9H2S5 420 aa19.65■□□□□ 0.74
CCP110-206ENST00000562616 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
CCP110-206ENST00000562616 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
CCP110-206ENST00000562616 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
CCP110-206ENST00000562616 RNF216Q9NWF9 866 aaPredicted RBP19.08■□□□□ 0.64
CCP110-206ENST00000562616 CNKSR2Q8WXI2 1034 aa19.04■□□□□ 0.64
CCP110-206ENST00000562616 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
CCP110-206ENST00000562616 POTEHQ6S545 545 aa18.65■□□□□ 0.58
CCP110-206ENST00000562616 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
CCP110-206ENST00000562616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCP110-206ENST00000562616 KCNA4P22459 653 aa18.46■□□□□ 0.55
CCP110-206ENST00000562616 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
CCP110-206ENST00000562616 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
CCP110-206ENST00000562616 DSG3P32926 999 aa18.12■□□□□ 0.49
CCP110-206ENST00000562616 CAPN15O75808 1086 aa18.04■□□□□ 0.48
CCP110-206ENST00000562616 ABCC9O60706 1549 aa18.02■□□□□ 0.48
CCP110-206ENST00000562616 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
CCP110-206ENST00000562616 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
CCP110-206ENST00000562616 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
CCP110-206ENST00000562616 CSRNP3Q8WYN3 585 aa17.86■□□□□ 0.45
CCP110-206ENST00000562616 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
CCP110-206ENST00000562616 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
CCP110-206ENST00000562616 APLP2Q06481 763 aa17.52■□□□□ 0.4
CCP110-206ENST00000562616 ABCB7O75027 752 aa17.52■□□□□ 0.39
CCP110-206ENST00000562616 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
CCP110-206ENST00000562616 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
CCP110-206ENST00000562616 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
CCP110-206ENST00000562616 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
CCP110-206ENST00000562616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
CCP110-206ENST00000562616 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.36
CCP110-206ENST00000562616 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
CCP110-206ENST00000562616 CHRDL2Q6WN34 429 aa17.27■□□□□ 0.36
CCP110-206ENST00000562616 NACADO15069 1562 aa17.18■□□□□ 0.34
CCP110-206ENST00000562616 RB1CC1Q8TDY2 1594 aa17.18■□□□□ 0.34
CCP110-206ENST00000562616 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
CCP110-206ENST00000562616 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
CCP110-206ENST00000562616 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
CCP110-206ENST00000562616 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
CCP110-206ENST00000562616 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
CCP110-206ENST00000562616 ZBTB22O15209 634 aa16.96■□□□□ 0.31
CCP110-206ENST00000562616 POLA2Q14181 598 aa16.87■□□□□ 0.29
CCP110-206ENST00000562616 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
CCP110-206ENST00000562616 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
CCP110-206ENST00000562616 PABPN1Q86U42 306 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCP110-206ENST00000562616 AMER1Q5JTC6 1135 aaPredicted RBP16.8■□□□□ 0.28
CCP110-206ENST00000562616 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
CCP110-206ENST00000562616 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
CCP110-206ENST00000562616 RTN4Q9NQC3 1192 aaKnown RBP16.69■□□□□ 0.26
CCP110-206ENST00000562616 PIP4P2Q8N4L2 257 aa16.67■□□□□ 0.26
CCP110-206ENST00000562616 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
CCP110-206ENST00000562616 HAX1O00165 279 aa16.62■□□□□ 0.25
CCP110-206ENST00000562616 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
CCP110-206ENST00000562616 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
CCP110-206ENST00000562616 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
CCP110-206ENST00000562616 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.23
CCP110-206ENST00000562616 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCP110-206ENST00000562616 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
CCP110-206ENST00000562616 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
CCP110-206ENST00000562616 EVX2Q03828 476 aa16.3■□□□□ 0.2
CCP110-206ENST00000562616 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
CCP110-206ENST00000562616 CC2D2AQ9P2K1 1620 aa16.25■□□□□ 0.19
CCP110-206ENST00000562616 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
CCP110-206ENST00000562616 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.18
CCP110-206ENST00000562616 FKBP8Q14318 412 aa16.12■□□□□ 0.17
CCP110-206ENST00000562616 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
CCP110-206ENST00000562616 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
CCP110-206ENST00000562616 BAZ1AQ9NRL2 1556 aaPredicted RBP16.05■□□□□ 0.16
CCP110-206ENST00000562616 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
CCP110-206ENST00000562616 LHX8Q68G74 356 aa16.03■□□□□ 0.16
CCP110-206ENST00000562616 PRKAR2AP13861 404 aaKnown RBP15.99■□□□□ 0.15
CCP110-206ENST00000562616 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
CCP110-206ENST00000562616 C19orf67A6NJJ6 358 aa15.96■□□□□ 0.15
CCP110-206ENST00000562616 GABBR2O75899 941 aa15.93■□□□□ 0.14
CCP110-206ENST00000562616 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
CCP110-206ENST00000562616 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
CCP110-206ENST00000562616 SPDYE2Q495Y8 402 aa15.92■□□□□ 0.14
CCP110-206ENST00000562616 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
CCP110-206ENST00000562616 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
CCP110-206ENST00000562616 WIZO95785 1651 aa15.86■□□□□ 0.13
CCP110-206ENST00000562616 PEG3Q9GZU2 1588 aa15.85■□□□□ 0.13
CCP110-206ENST00000562616 SPDYE1Q8NFV5 336 aaPredicted RBP15.85■□□□□ 0.13
CCP110-206ENST00000562616 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
CCP110-206ENST00000562616 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms