RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 ABCB7O75027 752 aa16.36■□□□□ 0.21
LINC00566-201ENST00000561557 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
LINC00566-201ENST00000561557 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
LINC00566-201ENST00000561557 ABCA5Q8WWZ7 1642 aa16.33■□□□□ 0.2
LINC00566-201ENST00000561557 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
LINC00566-201ENST00000561557 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
LINC00566-201ENST00000561557 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
LINC00566-201ENST00000561557 PBRM1Q86U86 1689 aa16.27■□□□□ 0.2
LINC00566-201ENST00000561557 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
LINC00566-201ENST00000561557 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
LINC00566-201ENST00000561557 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
LINC00566-201ENST00000561557 FBLN2P98095 1184 aa16.25■□□□□ 0.19
LINC00566-201ENST00000561557 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
LINC00566-201ENST00000561557 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
LINC00566-201ENST00000561557 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
LINC00566-201ENST00000561557 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
LINC00566-201ENST00000561557 CHD1O14646 1710 aa16.2■□□□□ 0.18
LINC00566-201ENST00000561557 IGF1RP08069 1367 aa16.18■□□□□ 0.18
LINC00566-201ENST00000561557 APLP2Q06481 763 aa16.18■□□□□ 0.18
LINC00566-201ENST00000561557 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
LINC00566-201ENST00000561557 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
LINC00566-201ENST00000561557 GRIN2AQ12879 1464 aa16.13■□□□□ 0.17
LINC00566-201ENST00000561557 SP7Q8TDD2 431 aaPredicted RBP16.12■□□□□ 0.17
LINC00566-201ENST00000561557 CUL7Q14999 1698 aa16.11■□□□□ 0.17
LINC00566-201ENST00000561557 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
LINC00566-201ENST00000561557 NUP160Q12769 1436 aa16.08■□□□□ 0.16
LINC00566-201ENST00000561557 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
LINC00566-201ENST00000561557 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
LINC00566-201ENST00000561557 EEA1Q15075 1411 aa16.04■□□□□ 0.16
LINC00566-201ENST00000561557 CEP170Q5SW79 1584 aa16■□□□□ 0.15
LINC00566-201ENST00000561557 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
LINC00566-201ENST00000561557 SLC4A2P04920 1241 aa16■□□□□ 0.15
LINC00566-201ENST00000561557 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
LINC00566-201ENST00000561557 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
LINC00566-201ENST00000561557 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
LINC00566-201ENST00000561557 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
LINC00566-201ENST00000561557 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
LINC00566-201ENST00000561557 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
LINC00566-201ENST00000561557 JPH4Q96JJ6 628 aa15.95■□□□□ 0.14
LINC00566-201ENST00000561557 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
LINC00566-201ENST00000561557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
LINC00566-201ENST00000561557 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
LINC00566-201ENST00000561557 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
LINC00566-201ENST00000561557 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
LINC00566-201ENST00000561557 PRG4Q92954 1404 aaPredicted RBP15.86■□□□□ 0.13
LINC00566-201ENST00000561557 ARAP1Q96P48 1450 aa15.86■□□□□ 0.13
LINC00566-201ENST00000561557 KCNA4P22459 653 aa15.86■□□□□ 0.13
LINC00566-201ENST00000561557 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
LINC00566-201ENST00000561557 IQGAP2Q13576 1575 aa15.84■□□□□ 0.13
LINC00566-201ENST00000561557 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
LINC00566-201ENST00000561557 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
LINC00566-201ENST00000561557 ERCC6L2Q5T890 1561 aa15.8■□□□□ 0.12
LINC00566-201ENST00000561557 KIF21BO75037 1637 aa15.79■□□□□ 0.12
LINC00566-201ENST00000561557 UGGT2Q9NYU1 1516 aa15.78■□□□□ 0.12
LINC00566-201ENST00000561557 CTTNBP2Q8WZ74 1663 aa15.78■□□□□ 0.12
LINC00566-201ENST00000561557 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
LINC00566-201ENST00000561557 GOLGA3Q08378 1498 aa15.73■□□□□ 0.11
LINC00566-201ENST00000561557 PTPRGP23470 1445 aa15.72■□□□□ 0.11
LINC00566-201ENST00000561557 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
LINC00566-201ENST00000561557 UBTFP17480 764 aaKnown RBP15.69■□□□□ 0.1
LINC00566-201ENST00000561557 KIAA0556O60303 1618 aa15.68■□□□□ 0.1
LINC00566-201ENST00000561557 POLA2Q14181 598 aa15.67■□□□□ 0.1
LINC00566-201ENST00000561557 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
LINC00566-201ENST00000561557 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
LINC00566-201ENST00000561557 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
LINC00566-201ENST00000561557 HAX1O00165 279 aa15.61■□□□□ 0.09
LINC00566-201ENST00000561557 UHRF1BP1LA0JNW5 1464 aa15.6■□□□□ 0.09
LINC00566-201ENST00000561557 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
LINC00566-201ENST00000561557 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
LINC00566-201ENST00000561557 SAMD9Q5K651 1589 aa15.6■□□□□ 0.09
LINC00566-201ENST00000561557 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
LINC00566-201ENST00000561557 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
LINC00566-201ENST00000561557 ADCY10Q96PN6 1610 aa15.57■□□□□ 0.08
LINC00566-201ENST00000561557 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
LINC00566-201ENST00000561557 ABCC2Q92887 1545 aa15.55■□□□□ 0.08
LINC00566-201ENST00000561557 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
LINC00566-201ENST00000561557 ABCA8O94911 1581 aa15.52■□□□□ 0.07
LINC00566-201ENST00000561557 MAPKBP1O60336 1514 aa15.52■□□□□ 0.07
LINC00566-201ENST00000561557 KDM5BQ9UGL1 1544 aa15.51■□□□□ 0.07
LINC00566-201ENST00000561557 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
LINC00566-201ENST00000561557 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
LINC00566-201ENST00000561557 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
LINC00566-201ENST00000561557 FMN1Q68DA7 1419 aa15.47■□□□□ 0.07
LINC00566-201ENST00000561557 REM2Q8IYK8 340 aaPredicted RBP15.47■□□□□ 0.07
LINC00566-201ENST00000561557 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
LINC00566-201ENST00000561557 ABCC10Q5T3U5 1492 aa15.44■□□□□ 0.06
LINC00566-201ENST00000561557 CLIP1P30622 1438 aa15.43■□□□□ 0.06
LINC00566-201ENST00000561557 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
LINC00566-201ENST00000561557 ASXL2Q76L83 1435 aa15.43■□□□□ 0.06
LINC00566-201ENST00000561557 LOC105371045A0A1W2PR82 267 aa15.42■□□□□ 0.06
LINC00566-201ENST00000561557 FAM69CQ0P6D2 419 aa15.41■□□□□ 0.06
LINC00566-201ENST00000561557 ATP10BO94823 1461 aa15.4■□□□□ 0.06
LINC00566-201ENST00000561557 NUP153P49790 1475 aaKnown RBP15.38■□□□□ 0.05
LINC00566-201ENST00000561557 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
LINC00566-201ENST00000561557 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
LINC00566-201ENST00000561557 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
LINC00566-201ENST00000561557 WDR7Q9Y4E6 1490 aa15.36■□□□□ 0.05
LINC00566-201ENST00000561557 FXR2P51116 673 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC00566-201ENST00000561557 GLI2P10070 1586 aa15.36■□□□□ 0.05
LINC00566-201ENST00000561557 EPRSP07814 1512 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms