RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 ZNF326Q5BKZ1 582 aaKnown RBP23.27■■□□□ 1.32
AP4E1-205ENST00000561393 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
AP4E1-205ENST00000561393 CUX1P39880 1505 aa23.26■■□□□ 1.31
AP4E1-205ENST00000561393 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
AP4E1-205ENST00000561393 FHOD3Q2V2M9 1422 aa23.23■■□□□ 1.31
AP4E1-205ENST00000561393 TONSLQ96HA7 1378 aa23.18■■□□□ 1.3
AP4E1-205ENST00000561393 KIF21BO75037 1637 aa23.15■■□□□ 1.3
AP4E1-205ENST00000561393 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
AP4E1-205ENST00000561393 NEFLP07196 543 aa23.11■■□□□ 1.29
AP4E1-205ENST00000561393 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
AP4E1-205ENST00000561393 PLEKHD1A6NEE1 506 aa23.09■■□□□ 1.29
AP4E1-205ENST00000561393 SIN3AQ96ST3 1273 aa23.09■■□□□ 1.29
AP4E1-205ENST00000561393 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
AP4E1-205ENST00000561393 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
AP4E1-205ENST00000561393 DDX10Q13206 875 aaKnown RBP23.06■■□□□ 1.28
AP4E1-205ENST00000561393 GTF3C3Q9Y5Q9 886 aa23.05■■□□□ 1.28
AP4E1-205ENST00000561393 MIER1Q8N108 512 aa23.05■■□□□ 1.28
AP4E1-205ENST00000561393 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
AP4E1-205ENST00000561393 ANP32CO43423 234 aa23.03■■□□□ 1.28
AP4E1-205ENST00000561393 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
AP4E1-205ENST00000561393 TSPY4P0CV99 314 aa23.02■■□□□ 1.28
AP4E1-205ENST00000561393 TSPY10P0CW01 314 aa23.02■■□□□ 1.28
AP4E1-205ENST00000561393 ACIN1Q9UKV3 1341 aaKnown RBP23.02■■□□□ 1.28
AP4E1-205ENST00000561393 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
AP4E1-205ENST00000561393 KCNH8Q96L42 1107 aa23.02■■□□□ 1.28
AP4E1-205ENST00000561393 ERICH3Q5RHP9 1530 aa23.01■■□□□ 1.27
AP4E1-205ENST00000561393 POLA1P09884 1462 aaPredicted RBP23■■□□□ 1.27
AP4E1-205ENST00000561393 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
AP4E1-205ENST00000561393 AQRO60306 1485 aaKnown RBP eCLIP22.98■■□□□ 1.27
AP4E1-205ENST00000561393 CLSPNQ9HAW4 1339 aa22.96■■□□□ 1.27
AP4E1-205ENST00000561393 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
AP4E1-205ENST00000561393 RAB3GAP2Q9H2M9 1393 aa22.95■■□□□ 1.26
AP4E1-205ENST00000561393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.93■■□□□ 1.26
AP4E1-205ENST00000561393 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
AP4E1-205ENST00000561393 JPH4Q96JJ6 628 aa22.86■■□□□ 1.25
AP4E1-205ENST00000561393 NPM1P06748 294 aaKnown RBP eCLIP22.85■■□□□ 1.25
AP4E1-205ENST00000561393 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
AP4E1-205ENST00000561393 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
AP4E1-205ENST00000561393 CARMIL2Q6F5E8 1435 aa22.81■■□□□ 1.24
AP4E1-205ENST00000561393 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
AP4E1-205ENST00000561393 KDM2AQ9Y2K7 1162 aa22.79■■□□□ 1.24
AP4E1-205ENST00000561393 PHLDB1Q86UU1 1377 aa22.78■■□□□ 1.24
AP4E1-205ENST00000561393 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
AP4E1-205ENST00000561393 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
AP4E1-205ENST00000561393 FOXD1Q16676 465 aa22.73■■□□□ 1.23
AP4E1-205ENST00000561393 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
AP4E1-205ENST00000561393 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
AP4E1-205ENST00000561393 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.23
AP4E1-205ENST00000561393 BCANQ96GW7 911 aa22.7■■□□□ 1.22
AP4E1-205ENST00000561393 GRIN2BQ13224 1484 aa22.69■■□□□ 1.22
AP4E1-205ENST00000561393 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
AP4E1-205ENST00000561393 SCAF1Q9H7N4 1312 aaKnown RBP22.68■■□□□ 1.22
AP4E1-205ENST00000561393 CASKIN1Q8WXD9 1431 aa22.66■■□□□ 1.22
AP4E1-205ENST00000561393 RGL3Q3MIN7 710 aa22.64■■□□□ 1.21
AP4E1-205ENST00000561393 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
AP4E1-205ENST00000561393 CCDC18Q5T9S5 1454 aa22.61■■□□□ 1.21
AP4E1-205ENST00000561393 MPHOSPH9Q99550 1183 aa22.59■■□□□ 1.21
AP4E1-205ENST00000561393 TIMELESSQ9UNS1 1208 aa22.59■■□□□ 1.21
AP4E1-205ENST00000561393 RRBP1Q9P2E9 1410 aaKnown RBP22.59■■□□□ 1.21
AP4E1-205ENST00000561393 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.21
AP4E1-205ENST00000561393 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
AP4E1-205ENST00000561393 FYCO1Q9BQS8 1478 aa22.55■■□□□ 1.2
AP4E1-205ENST00000561393 PPP1R15AO75807 674 aaPredicted RBP22.54■■□□□ 1.2
AP4E1-205ENST00000561393 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
AP4E1-205ENST00000561393 ZNF644Q9H582 1327 aaPredicted RBP22.54■■□□□ 1.2
AP4E1-205ENST00000561393 FAM9BQ8IZU0 186 aa22.54■■□□□ 1.2
AP4E1-205ENST00000561393 HNRNPMP52272 730 aaKnown RBP eCLIP22.53■■□□□ 1.2
AP4E1-205ENST00000561393 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
AP4E1-205ENST00000561393 TIAM1Q13009 1591 aa22.52■■□□□ 1.2
AP4E1-205ENST00000561393 PKD2Q13563 968 aa22.51■■□□□ 1.19
AP4E1-205ENST00000561393 PTPRGP23470 1445 aa22.51■■□□□ 1.19
AP4E1-205ENST00000561393 MYOM3Q5VTT5 1437 aa22.51■■□□□ 1.19
AP4E1-205ENST00000561393 NCOA2Q15596 1464 aa22.5■■□□□ 1.19
AP4E1-205ENST00000561393 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
AP4E1-205ENST00000561393 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
AP4E1-205ENST00000561393 MRS2Q9HD23 443 aa22.43■■□□□ 1.18
AP4E1-205ENST00000561393 ANKRD30AQ9BXX3 1397 aa22.42■■□□□ 1.18
AP4E1-205ENST00000561393 L3MBTL2Q969R5 705 aa22.42■■□□□ 1.18
AP4E1-205ENST00000561393 CARD11Q9BXL7 1154 aa22.42■■□□□ 1.18
AP4E1-205ENST00000561393 NUP155O75694 1391 aa22.42■■□□□ 1.18
AP4E1-205ENST00000561393 PCF11O94913 1555 aaKnown RBP22.42■■□□□ 1.18
AP4E1-205ENST00000561393 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
AP4E1-205ENST00000561393 CUL7Q14999 1698 aa22.41■■□□□ 1.18
AP4E1-205ENST00000561393 HSPA5P11021 654 aaKnown RBP22.4■■□□□ 1.18
AP4E1-205ENST00000561393 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.18
AP4E1-205ENST00000561393 FKBP8Q14318 412 aa22.38■■□□□ 1.17
AP4E1-205ENST00000561393 EFCAB2Q5VUJ9 269 aa22.37■■□□□ 1.17
AP4E1-205ENST00000561393 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
AP4E1-205ENST00000561393 ERICH6Q7L0X2 663 aa22.35■■□□□ 1.17
AP4E1-205ENST00000561393 TMC1Q8TDI8 760 aa22.33■■□□□ 1.17
AP4E1-205ENST00000561393 KIAA0586Q9BVV6 1533 aa22.33■■□□□ 1.17
AP4E1-205ENST00000561393 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
AP4E1-205ENST00000561393 IQGAP2Q13576 1575 aa22.31■■□□□ 1.16
AP4E1-205ENST00000561393 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
AP4E1-205ENST00000561393 SENP3-EIF4A1A0A087X0R7 540 aa22.3■■□□□ 1.16
AP4E1-205ENST00000561393 STAG3Q9UJ98 1225 aa22.29■■□□□ 1.16
AP4E1-205ENST00000561393 PRG4Q92954 1404 aaPredicted RBP22.29■■□□□ 1.16
AP4E1-205ENST00000561393 ESF1Q9H501 851 aaKnown RBP22.27■■□□□ 1.16
AP4E1-205ENST00000561393 UACAQ9BZF9 1416 aa22.27■■□□□ 1.15
AP4E1-205ENST00000561393 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms