RNA–Protein interactions for RNA: ENST00000560890.5

APH1B-210, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-210ENST00000560890 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
APH1B-210ENST00000560890 GRIN2AQ12879 1464 aa14.32□□□□□ -0.12
APH1B-210ENST00000560890 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
APH1B-210ENST00000560890 PBRM1Q86U86 1689 aa14.3□□□□□ -0.12
APH1B-210ENST00000560890 CUL7Q14999 1698 aa14.3□□□□□ -0.12
APH1B-210ENST00000560890 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
APH1B-210ENST00000560890 JPH4Q96JJ6 628 aa14.28□□□□□ -0.12
APH1B-210ENST00000560890 NUP160Q12769 1436 aa14.26□□□□□ -0.13
APH1B-210ENST00000560890 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
APH1B-210ENST00000560890 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
APH1B-210ENST00000560890 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
APH1B-210ENST00000560890 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
APH1B-210ENST00000560890 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
APH1B-210ENST00000560890 KIF21BO75037 1637 aa14.2□□□□□ -0.14
APH1B-210ENST00000560890 DNAJC5Q9H3Z4 198 aa14.2□□□□□ -0.14
APH1B-210ENST00000560890 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
APH1B-210ENST00000560890 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
APH1B-210ENST00000560890 CHD1O14646 1710 aa14.15□□□□□ -0.14
APH1B-210ENST00000560890 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
APH1B-210ENST00000560890 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
APH1B-210ENST00000560890 PRG4Q92954 1404 aaPredicted RBP14.13□□□□□ -0.15
APH1B-210ENST00000560890 CLASP1Q7Z460 1538 aa14.11□□□□□ -0.15
APH1B-210ENST00000560890 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
APH1B-210ENST00000560890 IQGAP2Q13576 1575 aa14.09□□□□□ -0.15
APH1B-210ENST00000560890 UGGT2Q9NYU1 1516 aa14.06□□□□□ -0.16
APH1B-210ENST00000560890 CYB5RLQ6IPT4 315 aa14.06□□□□□ -0.16
APH1B-210ENST00000560890 PTPRGP23470 1445 aa14.05□□□□□ -0.16
APH1B-210ENST00000560890 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
APH1B-210ENST00000560890 CLIP1P30622 1438 aa14.04□□□□□ -0.16
APH1B-210ENST00000560890 DISP1Q96F81 1524 aa14.01□□□□□ -0.17
APH1B-210ENST00000560890 CEP162Q5TB80 1403 aa14.01□□□□□ -0.17
APH1B-210ENST00000560890 ARHGEF11O15085 1522 aa14□□□□□ -0.17
APH1B-210ENST00000560890 POTEDQ86YR6 584 aa14□□□□□ -0.17
APH1B-210ENST00000560890 SHROOM2Q13796 1616 aa13.99□□□□□ -0.17
APH1B-210ENST00000560890 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
APH1B-210ENST00000560890 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
APH1B-210ENST00000560890 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
APH1B-210ENST00000560890 FHOD3Q2V2M9 1422 aa13.97□□□□□ -0.17
APH1B-210ENST00000560890 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
APH1B-210ENST00000560890 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.18
APH1B-210ENST00000560890 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
APH1B-210ENST00000560890 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
APH1B-210ENST00000560890 FMN1Q68DA7 1419 aa13.93□□□□□ -0.18
APH1B-210ENST00000560890 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
APH1B-210ENST00000560890 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
APH1B-210ENST00000560890 ARAP1Q96P48 1450 aa13.91□□□□□ -0.18
APH1B-210ENST00000560890 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.18
APH1B-210ENST00000560890 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.18
APH1B-210ENST00000560890 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.18
APH1B-210ENST00000560890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
APH1B-210ENST00000560890 HNRNPUL2Q1KMD3 747 aaKnown RBP13.9□□□□□ -0.18
APH1B-210ENST00000560890 SAMD9Q5K651 1589 aa13.9□□□□□ -0.18
APH1B-210ENST00000560890 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
APH1B-210ENST00000560890 KCNA4P22459 653 aa13.88□□□□□ -0.19
APH1B-210ENST00000560890 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
APH1B-210ENST00000560890 APLP2Q06481 763 aa13.87□□□□□ -0.19
APH1B-210ENST00000560890 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
APH1B-210ENST00000560890 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
APH1B-210ENST00000560890 UHRF1BP1LA0JNW5 1464 aa13.84□□□□□ -0.19
APH1B-210ENST00000560890 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
APH1B-210ENST00000560890 PLEKHD1A6NEE1 506 aa13.83□□□□□ -0.2
APH1B-210ENST00000560890 CASKIN1Q8WXD9 1431 aa13.82□□□□□ -0.2
APH1B-210ENST00000560890 ABCC2Q92887 1545 aa13.79□□□□□ -0.2
APH1B-210ENST00000560890 ABCA8O94911 1581 aa13.79□□□□□ -0.2
APH1B-210ENST00000560890 ATP10BO94823 1461 aa13.78□□□□□ -0.2
APH1B-210ENST00000560890 NUP153P49790 1475 aaKnown RBP13.76□□□□□ -0.21
APH1B-210ENST00000560890 KCNH8Q96L42 1107 aa13.76□□□□□ -0.21
APH1B-210ENST00000560890 KDM5BQ9UGL1 1544 aa13.75□□□□□ -0.21
APH1B-210ENST00000560890 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
APH1B-210ENST00000560890 RAPGEF6Q8TEU7 1601 aa13.74□□□□□ -0.21
APH1B-210ENST00000560890 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
APH1B-210ENST00000560890 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
APH1B-210ENST00000560890 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
APH1B-210ENST00000560890 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
APH1B-210ENST00000560890 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.21
APH1B-210ENST00000560890 ADCY10Q96PN6 1610 aa13.71□□□□□ -0.22
APH1B-210ENST00000560890 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
APH1B-210ENST00000560890 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
APH1B-210ENST00000560890 HECW1Q76N89 1606 aa13.7□□□□□ -0.22
APH1B-210ENST00000560890 ASXL2Q76L83 1435 aa13.7□□□□□ -0.22
APH1B-210ENST00000560890 MTUS2Q5JR59 1369 aa13.7□□□□□ -0.22
APH1B-210ENST00000560890 KANK4Q5T7N3 995 aaPredicted RBP13.69□□□□□ -0.22
APH1B-210ENST00000560890 PCF11O94913 1555 aaKnown RBP13.68□□□□□ -0.22
APH1B-210ENST00000560890 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
APH1B-210ENST00000560890 TROQ12816 1431 aaPredicted RBP13.64□□□□□ -0.23
APH1B-210ENST00000560890 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
APH1B-210ENST00000560890 WDR7Q9Y4E6 1490 aa13.64□□□□□ -0.23
APH1B-210ENST00000560890 PPARGC1BQ86YN6 1023 aaKnown RBP13.64□□□□□ -0.23
APH1B-210ENST00000560890 MAPKBP1O60336 1514 aa13.63□□□□□ -0.23
APH1B-210ENST00000560890 ZCCHC11Q5TAX3 1644 aaKnown RBP13.61□□□□□ -0.23
APH1B-210ENST00000560890 ABCC10Q5T3U5 1492 aa13.6□□□□□ -0.23
APH1B-210ENST00000560890 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
APH1B-210ENST00000560890 TIAM1Q13009 1591 aa13.58□□□□□ -0.24
APH1B-210ENST00000560890 EFCAB2Q5VUJ9 269 aa13.57□□□□□ -0.24
APH1B-210ENST00000560890 CCNB3Q8WWL7 1395 aa13.57□□□□□ -0.24
APH1B-210ENST00000560890 CD109Q6YHK3 1445 aa13.56□□□□□ -0.24
APH1B-210ENST00000560890 CFDP1Q9UEE9 299 aaPredicted RBP13.56□□□□□ -0.24
APH1B-210ENST00000560890 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
APH1B-210ENST00000560890 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
APH1B-210ENST00000560890 EHBP1L1Q8N3D4 1523 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms