RNA–Protein interactions for RNA: ENST00000560875.1

RNF31-225, Transcript of ring finger protein 31, human

TSL 4

Gene RNF31, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-225	ENST00000560875	KIAA0586	Q9BVV6	1533 aa		33.88	■■■■□ 3.01
RNF31-225	ENST00000560875	GOLGA3	Q08378	1498 aa		33.84	■■■■□ 3.01
RNF31-225	ENST00000560875	SHROOM2	Q13796	1616 aa		33.83	■■■■□ 3.01
RNF31-225	ENST00000560875	ARHGEF11	O15085	1522 aa		33.81	■■■■□ 3
RNF31-225	ENST00000560875	LOC105371045	A0A1W2PR82	267 aa		33.8	■■■■□ 3
RNF31-225	ENST00000560875	RIMBP3C	A6NJZ7	1639 aa		33.79	■■■■□ 3
RNF31-225	ENST00000560875	RIMBP3B	A6NNM3	1639 aa		33.79	■■■■□ 3
RNF31-225	ENST00000560875	RIMBP3	Q9UFD9	1639 aa		33.79	■■■■□ 3
RNF31-225	ENST00000560875	CTTNBP2	Q8WZ74	1663 aa		33.78	■■■■□ 3
RNF31-225	ENST00000560875	UBTF	P17480	764 aa	Known RBP	33.77	■■■■□ 3
RNF31-225	ENST00000560875	JPH4	Q96JJ6	628 aa		33.75	■■■□□ 2.99
RNF31-225	ENST00000560875	IQGAP2	Q13576	1575 aa		33.74	■■■□□ 2.99
RNF31-225	ENST00000560875	PRG4	Q92954	1404 aa	Predicted RBP	33.63	■■■□□ 2.97
RNF31-225	ENST00000560875	TNIK	Q9UKE5	1360 aa		33.6	■■■□□ 2.97
RNF31-225	ENST00000560875	UGGT2	Q9NYU1	1516 aa		33.57	■■■□□ 2.96
RNF31-225	ENST00000560875	CARMIL2	Q6F5E8	1435 aa		33.54	■■■□□ 2.96
RNF31-225	ENST00000560875	ERCC6L2	Q5T890	1561 aa		33.54	■■■□□ 2.96
RNF31-225	ENST00000560875	ARAP1	Q96P48	1450 aa		33.53	■■■□□ 2.96
RNF31-225	ENST00000560875	CYB5RL	Q6IPT4	315 aa		33.45	■■■□□ 2.95
RNF31-225	ENST00000560875	RANGAP1	P46060	587 aa	Predicted RBP	33.42	■■■□□ 2.94
RNF31-225	ENST00000560875	DISP1	Q96F81	1524 aa		33.42	■■■□□ 2.94
RNF31-225	ENST00000560875	KIAA0556	O60303	1618 aa		33.39	■■■□□ 2.94
RNF31-225	ENST00000560875	CEP162	Q5TB80	1403 aa		33.31	■■■□□ 2.92
RNF31-225	ENST00000560875	SAMD9	Q5K651	1589 aa		33.3	■■■□□ 2.92
RNF31-225	ENST00000560875	PTPRG	P23470	1445 aa		33.3	■■■□□ 2.92
RNF31-225	ENST00000560875	CLIP1	P30622	1438 aa		33.28	■■■□□ 2.92
RNF31-225	ENST00000560875	EFCAB5	A4FU69	1503 aa		33.27	■■■□□ 2.92
RNF31-225	ENST00000560875	P3H3	Q8IVL6	736 aa		33.19	■■■□□ 2.9
RNF31-225	ENST00000560875	ARHGAP35	Q9NRY4	1499 aa		33.18	■■■□□ 2.9
RNF31-225	ENST00000560875	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.12	■■■□□ 2.89
RNF31-225	ENST00000560875	UACA	Q9BZF9	1416 aa		33.1	■■■□□ 2.89
RNF31-225	ENST00000560875	UHRF1BP1L	A0JNW5	1464 aa		33.08	■■■□□ 2.89
RNF31-225	ENST00000560875	ADCY10	Q96PN6	1610 aa		33.08	■■■□□ 2.89
RNF31-225	ENST00000560875	FHOD3	Q2V2M9	1422 aa		33.07	■■■□□ 2.88
RNF31-225	ENST00000560875	ABCC2	Q92887	1545 aa		33.04	■■■□□ 2.88
RNF31-225	ENST00000560875	NPM1	P06748	294 aa	Known RBP eCLIP	33.04	■■■□□ 2.88
RNF31-225	ENST00000560875	ABCA8	O94911	1581 aa		33	■■■□□ 2.87
RNF31-225	ENST00000560875	PLB1	Q6P1J6	1458 aa		32.96	■■■□□ 2.87
RNF31-225	ENST00000560875	FMN1	Q68DA7	1419 aa		32.94	■■■□□ 2.86
RNF31-225	ENST00000560875	RAPGEF6	Q8TEU7	1601 aa		32.93	■■■□□ 2.86
RNF31-225	ENST00000560875	KDM5B	Q9UGL1	1544 aa		32.9	■■■□□ 2.86
RNF31-225	ENST00000560875	MAPKBP1	O60336	1514 aa		32.87	■■■□□ 2.85
RNF31-225	ENST00000560875	VPS8	Q8N3P4	1428 aa		32.85	■■■□□ 2.85
RNF31-225	ENST00000560875	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.83	■■■□□ 2.85
RNF31-225	ENST00000560875	CASKIN1	Q8WXD9	1431 aa		32.75	■■■□□ 2.83
RNF31-225	ENST00000560875	NUP153	P49790	1475 aa	Known RBP	32.74	■■■□□ 2.83
RNF31-225	ENST00000560875	HECW1	Q76N89	1606 aa		32.74	■■■□□ 2.83
RNF31-225	ENST00000560875	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.74	■■■□□ 2.83
RNF31-225	ENST00000560875	ATP10B	O94823	1461 aa		32.71	■■■□□ 2.83
RNF31-225	ENST00000560875	ASXL2	Q76L83	1435 aa		32.69	■■■□□ 2.82
RNF31-225	ENST00000560875	PCF11	O94913	1555 aa	Known RBP	32.69	■■■□□ 2.82
RNF31-225	ENST00000560875	FYCO1	Q9BQS8	1478 aa		32.68	■■■□□ 2.82
RNF31-225	ENST00000560875	TRH	P20396	242 aa	Predicted RBP	32.67	■■■□□ 2.82
RNF31-225	ENST00000560875	ABCC10	Q5T3U5	1492 aa		32.64	■■■□□ 2.82
RNF31-225	ENST00000560875	KIF13A	Q9H1H9	1805 aa		32.62	■■■□□ 2.81
RNF31-225	ENST00000560875	WDR7	Q9Y4E6	1490 aa		32.61	■■■□□ 2.81
RNF31-225	ENST00000560875	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.61	■■■□□ 2.81
RNF31-225	ENST00000560875	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.61	■■■□□ 2.81
RNF31-225	ENST00000560875	EPRS	P07814	1512 aa	Known RBP	32.6	■■■□□ 2.81
RNF31-225	ENST00000560875	DIP2B	Q9P265	1576 aa		32.59	■■■□□ 2.81
RNF31-225	ENST00000560875	ARID3C	A6NKF2	412 aa		32.59	■■■□□ 2.81
RNF31-225	ENST00000560875	APLP2	Q06481	763 aa		32.58	■■■□□ 2.81
RNF31-225	ENST00000560875	CCDC18	Q5T9S5	1454 aa		32.57	■■■□□ 2.8
RNF31-225	ENST00000560875	GLI2	P10070	1586 aa		32.54	■■■□□ 2.8
RNF31-225	ENST00000560875	LRRIQ1	Q96JM4	1722 aa		32.54	■■■□□ 2.8
RNF31-225	ENST00000560875	PLEKHD1	A6NEE1	506 aa		32.53	■■■□□ 2.8
RNF31-225	ENST00000560875	FAM69C	Q0P6D2	419 aa		32.53	■■■□□ 2.8
RNF31-225	ENST00000560875	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.53	■■■□□ 2.8
RNF31-225	ENST00000560875	CDK13	Q14004	1512 aa	Known RBP	32.51	■■■□□ 2.8
RNF31-225	ENST00000560875	MAP3K1	Q13233	1512 aa		32.44	■■■□□ 2.78
RNF31-225	ENST00000560875	KCNH8	Q96L42	1107 aa		32.43	■■■□□ 2.78
RNF31-225	ENST00000560875	TIAM1	Q13009	1591 aa		32.41	■■■□□ 2.78
RNF31-225	ENST00000560875	CFAP43	Q8NDM7	1665 aa		32.4	■■■□□ 2.78
RNF31-225	ENST00000560875	MAP3K4	Q9Y6R4	1608 aa		32.38	■■■□□ 2.77
RNF31-225	ENST00000560875	TSPOAP1	O95153	1857 aa		32.35	■■■□□ 2.77
RNF31-225	ENST00000560875	ABCA9	Q8IUA7	1624 aa		32.34	■■■□□ 2.77
RNF31-225	ENST00000560875	TRO	Q12816	1431 aa	Predicted RBP	32.34	■■■□□ 2.77
RNF31-225	ENST00000560875	KANK4	Q5T7N3	995 aa	Predicted RBP	32.33	■■■□□ 2.77
RNF31-225	ENST00000560875	MTUS2	Q5JR59	1369 aa		32.3	■■■□□ 2.76
RNF31-225	ENST00000560875	LRRC9	Q6ZRR7	1453 aa		32.29	■■■□□ 2.76
RNF31-225	ENST00000560875	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.28	■■■□□ 2.76
RNF31-225	ENST00000560875	CD109	Q6YHK3	1445 aa		32.27	■■■□□ 2.76
RNF31-225	ENST00000560875	KIF14	Q15058	1648 aa		32.27	■■■□□ 2.76
RNF31-225	ENST00000560875	TEX14	Q8IWB6	1497 aa		32.25	■■■□□ 2.75
RNF31-225	ENST00000560875	MAGI3	Q5TCQ9	1506 aa		32.25	■■■□□ 2.75
RNF31-225	ENST00000560875	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
RNF31-225	ENST00000560875	PPRC1	Q5VV67	1664 aa	Known RBP	32.23	■■■□□ 2.75
RNF31-225	ENST00000560875	EHBP1L1	Q8N3D4	1523 aa		32.21	■■■□□ 2.75
RNF31-225	ENST00000560875	TTC37	Q6PGP7	1564 aa		32.16	■■■□□ 2.74
RNF31-225	ENST00000560875	MYO5C	Q9NQX4	1742 aa		32.14	■■■□□ 2.74
RNF31-225	ENST00000560875	PHLDB1	Q86UU1	1377 aa		32.1	■■■□□ 2.73
RNF31-225	ENST00000560875	ARAP3	Q8WWN8	1544 aa		32.1	■■■□□ 2.73
RNF31-225	ENST00000560875	CFAP74	Q9C0B2	1584 aa		32.08	■■■□□ 2.73
RNF31-225	ENST00000560875	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.08	■■■□□ 2.73
RNF31-225	ENST00000560875	PLCH2	O75038	1416 aa		32.07	■■■□□ 2.72
RNF31-225	ENST00000560875	NCOA2	Q15596	1464 aa		32.06	■■■□□ 2.72
RNF31-225	ENST00000560875	NEO1	Q92859	1461 aa		32.06	■■■□□ 2.72
RNF31-225	ENST00000560875	CDC42BPA	Q5VT25	1732 aa		32.01	■■■□□ 2.72
RNF31-225	ENST00000560875	KDM6B	O15054	1643 aa		32	■■■□□ 2.71
RNF31-225	ENST00000560875	PREX2	Q70Z35	1606 aa		32	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms