RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
CTDSPL2-210ENST00000560834 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
CTDSPL2-210ENST00000560834 CUL7Q14999 1698 aa11.87□□□□□ -0.51
CTDSPL2-210ENST00000560834 SNAPC4Q5SXM2 1469 aa11.87□□□□□ -0.51
CTDSPL2-210ENST00000560834 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
CTDSPL2-210ENST00000560834 CHD1O14646 1710 aa11.84□□□□□ -0.51
CTDSPL2-210ENST00000560834 EEA1Q15075 1411 aa11.83□□□□□ -0.52
CTDSPL2-210ENST00000560834 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
CTDSPL2-210ENST00000560834 SYNJ2O15056 1496 aa11.8□□□□□ -0.52
CTDSPL2-210ENST00000560834 IGF1RP08069 1367 aa11.79□□□□□ -0.52
CTDSPL2-210ENST00000560834 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
CTDSPL2-210ENST00000560834 KIF21BO75037 1637 aa11.78□□□□□ -0.52
CTDSPL2-210ENST00000560834 PRXQ9BXM0 1461 aa11.77□□□□□ -0.52
CTDSPL2-210ENST00000560834 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
CTDSPL2-210ENST00000560834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.76□□□□□ -0.539e-8■□□□□ 9.4
CTDSPL2-210ENST00000560834 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
CTDSPL2-210ENST00000560834 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
CTDSPL2-210ENST00000560834 DSG3P32926 999 aa11.73□□□□□ -0.53
CTDSPL2-210ENST00000560834 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
CTDSPL2-210ENST00000560834 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
CTDSPL2-210ENST00000560834 CARMIL1Q5VZK9 1371 aa11.72□□□□□ -0.53
CTDSPL2-210ENST00000560834 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.53
CTDSPL2-210ENST00000560834 CLASP1Q7Z460 1538 aa11.7□□□□□ -0.54
CTDSPL2-210ENST00000560834 NUP160Q12769 1436 aa11.7□□□□□ -0.54
CTDSPL2-210ENST00000560834 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
CTDSPL2-210ENST00000560834 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
CTDSPL2-210ENST00000560834 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL2-210ENST00000560834 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
CTDSPL2-210ENST00000560834 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
CTDSPL2-210ENST00000560834 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
CTDSPL2-210ENST00000560834 FBLN2P98095 1184 aa11.62□□□□□ -0.55
CTDSPL2-210ENST00000560834 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
CTDSPL2-210ENST00000560834 CAPN15O75808 1086 aa11.58□□□□□ -0.56
CTDSPL2-210ENST00000560834 UGGT2Q9NYU1 1516 aa11.57□□□□□ -0.56
CTDSPL2-210ENST00000560834 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
CTDSPL2-210ENST00000560834 ERCC6L2Q5T890 1561 aa11.55□□□□□ -0.56
CTDSPL2-210ENST00000560834 OSCARQ8IYS5 282 aa11.55□□□□□ -0.56
CTDSPL2-210ENST00000560834 KIAA0556O60303 1618 aa11.54□□□□□ -0.56
CTDSPL2-210ENST00000560834 ARHGEF11O15085 1522 aa11.52□□□□□ -0.57
CTDSPL2-210ENST00000560834 DISP1Q96F81 1524 aa11.52□□□□□ -0.57
CTDSPL2-210ENST00000560834 RIMBP3CA6NJZ7 1639 aa11.52□□□□□ -0.57
CTDSPL2-210ENST00000560834 RIMBP3BA6NNM3 1639 aa11.52□□□□□ -0.57
CTDSPL2-210ENST00000560834 RIMBP3Q9UFD9 1639 aa11.52□□□□□ -0.57
CTDSPL2-210ENST00000560834 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
CTDSPL2-210ENST00000560834 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
CTDSPL2-210ENST00000560834 PRG4Q92954 1404 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL2-210ENST00000560834 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
CTDSPL2-210ENST00000560834 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
CTDSPL2-210ENST00000560834 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL2-210ENST00000560834 LOC105371045A0A1W2PR82 267 aa11.46□□□□□ -0.57
CTDSPL2-210ENST00000560834 JPH4Q96JJ6 628 aa11.46□□□□□ -0.57
CTDSPL2-210ENST00000560834 ARAP1Q96P48 1450 aa11.45□□□□□ -0.58
CTDSPL2-210ENST00000560834 CEP162Q5TB80 1403 aa11.45□□□□□ -0.58
CTDSPL2-210ENST00000560834 ZBTB22O15209 634 aa11.45□□□□□ -0.58
CTDSPL2-210ENST00000560834 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
CTDSPL2-210ENST00000560834 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
CTDSPL2-210ENST00000560834 CLIP1P30622 1438 aa11.43□□□□□ -0.58
CTDSPL2-210ENST00000560834 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
CTDSPL2-210ENST00000560834 ABCA8O94911 1581 aa11.39□□□□□ -0.59
CTDSPL2-210ENST00000560834 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
CTDSPL2-210ENST00000560834 PCF11O94913 1555 aaKnown RBP11.38□□□□□ -0.59
CTDSPL2-210ENST00000560834 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
CTDSPL2-210ENST00000560834 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
CTDSPL2-210ENST00000560834 RANGAP1P46060 587 aaPredicted RBP11.37□□□□□ -0.59
CTDSPL2-210ENST00000560834 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
CTDSPL2-210ENST00000560834 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
CTDSPL2-210ENST00000560834 PLB1Q6P1J6 1458 aa11.35□□□□□ -0.59
CTDSPL2-210ENST00000560834 PTPRGP23470 1445 aa11.35□□□□□ -0.59
CTDSPL2-210ENST00000560834 HECW1Q76N89 1606 aa11.34□□□□□ -0.59
CTDSPL2-210ENST00000560834 UHRF1BP1LA0JNW5 1464 aa11.33□□□□□ -0.6
CTDSPL2-210ENST00000560834 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
CTDSPL2-210ENST00000560834 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
CTDSPL2-210ENST00000560834 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-210ENST00000560834 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
CTDSPL2-210ENST00000560834 NUP153P49790 1475 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-210ENST00000560834 FYCO1Q9BQS8 1478 aa11.31□□□□□ -0.6
CTDSPL2-210ENST00000560834 ZCCHC11Q5TAX3 1644 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-210ENST00000560834 VPS8Q8N3P4 1428 aa11.3□□□□□ -0.6
CTDSPL2-210ENST00000560834 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
CTDSPL2-210ENST00000560834 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
CTDSPL2-210ENST00000560834 CFAP43Q8NDM7 1665 aa11.3□□□□□ -0.6
CTDSPL2-210ENST00000560834 CASKIN1Q8WXD9 1431 aa11.28□□□□□ -0.6
CTDSPL2-210ENST00000560834 KDM5BQ9UGL1 1544 aa11.28□□□□□ -0.6
CTDSPL2-210ENST00000560834 TTBK1Q5TCY1 1321 aaPredicted RBP11.27□□□□□ -0.61
CTDSPL2-210ENST00000560834 CDK13Q14004 1512 aaKnown RBP11.26□□□□□ -0.61
CTDSPL2-210ENST00000560834 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
CTDSPL2-210ENST00000560834 CYB5RLQ6IPT4 315 aa11.25□□□□□ -0.61
CTDSPL2-210ENST00000560834 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
CTDSPL2-210ENST00000560834 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
CTDSPL2-210ENST00000560834 ATP10BO94823 1461 aa11.23□□□□□ -0.61
CTDSPL2-210ENST00000560834 TIAM1Q13009 1591 aa11.23□□□□□ -0.61
CTDSPL2-210ENST00000560834 MAGI3Q5TCQ9 1506 aa11.21□□□□□ -0.61
CTDSPL2-210ENST00000560834 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
CTDSPL2-210ENST00000560834 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
CTDSPL2-210ENST00000560834 DIP2BQ9P265 1576 aa11.18□□□□□ -0.62
CTDSPL2-210ENST00000560834 EHBP1L1Q8N3D4 1523 aa11.17□□□□□ -0.62
CTDSPL2-210ENST00000560834 WDR7Q9Y4E6 1490 aa11.17□□□□□ -0.62
CTDSPL2-210ENST00000560834 ASXL2Q76L83 1435 aa11.17□□□□□ -0.62
CTDSPL2-210ENST00000560834 KIF14Q15058 1648 aa11.17□□□□□ -0.62
CTDSPL2-210ENST00000560834 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms