RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 PTPRGP23470 1445 aa13.97□□□□□ -0.17
TRPM1-212ENST00000560801 SCAF1Q9H7N4 1312 aaKnown RBP13.96□□□□□ -0.17
TRPM1-212ENST00000560801 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
TRPM1-212ENST00000560801 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
TRPM1-212ENST00000560801 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
TRPM1-212ENST00000560801 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
TRPM1-212ENST00000560801 CFTRP13569 1480 aa13.91□□□□□ -0.18
TRPM1-212ENST00000560801 FGD5Q6ZNL6 1462 aa13.9□□□□□ -0.18
TRPM1-212ENST00000560801 CLIP1P30622 1438 aa13.9□□□□□ -0.18
TRPM1-212ENST00000560801 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.19
TRPM1-212ENST00000560801 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
TRPM1-212ENST00000560801 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
TRPM1-212ENST00000560801 GGT6Q6P531 493 aa13.86□□□□□ -0.19
TRPM1-212ENST00000560801 GOLGA3Q08378 1498 aa13.86□□□□□ -0.19
TRPM1-212ENST00000560801 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
TRPM1-212ENST00000560801 NEUROD1Q13562 356 aa13.83□□□□□ -0.2
TRPM1-212ENST00000560801 CCNB3Q8WWL7 1395 aa13.82□□□□□ -0.2
TRPM1-212ENST00000560801 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
TRPM1-212ENST00000560801 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
TRPM1-212ENST00000560801 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.2
TRPM1-212ENST00000560801 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.2
TRPM1-212ENST00000560801 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
TRPM1-212ENST00000560801 HDGFP51858 240 aaKnown RBP13.76□□□□□ -0.21
TRPM1-212ENST00000560801 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
TRPM1-212ENST00000560801 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
TRPM1-212ENST00000560801 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
TRPM1-212ENST00000560801 UNC13AQ9UPW8 1703 aa13.74□□□□□ -0.21
TRPM1-212ENST00000560801 SNAPC4Q5SXM2 1469 aa13.73□□□□□ -0.21
TRPM1-212ENST00000560801 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
TRPM1-212ENST00000560801 TNIKQ9UKE5 1360 aa13.7□□□□□ -0.22
TRPM1-212ENST00000560801 KANK1Q14678 1352 aa13.7□□□□□ -0.22
TRPM1-212ENST00000560801 POLA1P09884 1462 aaPredicted RBP13.69□□□□□ -0.22
TRPM1-212ENST00000560801 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
TRPM1-212ENST00000560801 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
TRPM1-212ENST00000560801 A0A0G2JS52 829 aa13.68□□□□□ -0.22
TRPM1-212ENST00000560801 IGF1RP08069 1367 aa13.67□□□□□ -0.22
TRPM1-212ENST00000560801 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
TRPM1-212ENST00000560801 KIF3BO15066 747 aa13.65□□□□□ -0.22
TRPM1-212ENST00000560801 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
TRPM1-212ENST00000560801 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
TRPM1-212ENST00000560801 EID1Q9Y6B2 187 aa13.63□□□□□ -0.23
TRPM1-212ENST00000560801 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
TRPM1-212ENST00000560801 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
TRPM1-212ENST00000560801 MYT1Q01538 1121 aa13.62□□□□□ -0.23
TRPM1-212ENST00000560801 WASHC2CQ9Y4E1 1318 aa13.62□□□□□ -0.23
TRPM1-212ENST00000560801 FHOD3Q2V2M9 1422 aa13.61□□□□□ -0.23
TRPM1-212ENST00000560801 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
TRPM1-212ENST00000560801 ZBTB7CA1YPR0 619 aa13.6□□□□□ -0.23
TRPM1-212ENST00000560801 RGL3Q3MIN7 710 aa13.6□□□□□ -0.23
TRPM1-212ENST00000560801 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRPM1-212ENST00000560801 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
TRPM1-212ENST00000560801 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
TRPM1-212ENST00000560801 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
TRPM1-212ENST00000560801 NEFMP07197 916 aa13.56□□□□□ -0.24
TRPM1-212ENST00000560801 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
TRPM1-212ENST00000560801 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
TRPM1-212ENST00000560801 POGKQ9P215 609 aa13.53□□□□□ -0.24
TRPM1-212ENST00000560801 SYNJ1O43426 1573 aa13.52□□□□□ -0.24
TRPM1-212ENST00000560801 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
TRPM1-212ENST00000560801 CCDC18Q5T9S5 1454 aa13.5□□□□□ -0.25
TRPM1-212ENST00000560801 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
TRPM1-212ENST00000560801 CUX1P39880 1505 aa13.47□□□□□ -0.25
TRPM1-212ENST00000560801 POGZQ7Z3K3 1410 aa13.45□□□□□ -0.26
TRPM1-212ENST00000560801 RAPGEF3O95398 923 aa13.45□□□□□ -0.26
TRPM1-212ENST00000560801 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
TRPM1-212ENST00000560801 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
TRPM1-212ENST00000560801 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
TRPM1-212ENST00000560801 UACAQ9BZF9 1416 aa13.43□□□□□ -0.26
TRPM1-212ENST00000560801 ABCA10Q8WWZ4 1543 aa13.43□□□□□ -0.26
TRPM1-212ENST00000560801 ANKRD30AQ9BXX3 1397 aa13.42□□□□□ -0.26
TRPM1-212ENST00000560801 NPM2Q86SE8 214 aaKnown RBP13.41□□□□□ -0.26
TRPM1-212ENST00000560801 RUSC2Q8N2Y8 1516 aa13.4□□□□□ -0.26
TRPM1-212ENST00000560801 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
TRPM1-212ENST00000560801 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
TRPM1-212ENST00000560801 TMC1Q8TDI8 760 aa13.39□□□□□ -0.27
TRPM1-212ENST00000560801 PHF23Q9BUL5 403 aaPredicted RBP13.39□□□□□ -0.27
TRPM1-212ENST00000560801 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
TRPM1-212ENST00000560801 STK26Q9P289 416 aa13.38□□□□□ -0.27
TRPM1-212ENST00000560801 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
TRPM1-212ENST00000560801 ARHGAP35Q9NRY4 1499 aa13.37□□□□□ -0.27
TRPM1-212ENST00000560801 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
TRPM1-212ENST00000560801 SAFB2Q14151 953 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRPM1-212ENST00000560801 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
TRPM1-212ENST00000560801 NUP155O75694 1391 aa13.33□□□□□ -0.27
TRPM1-212ENST00000560801 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
TRPM1-212ENST00000560801 WDR62O43379 1518 aa13.31□□□□□ -0.28
TRPM1-212ENST00000560801 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
TRPM1-212ENST00000560801 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
TRPM1-212ENST00000560801 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
TRPM1-212ENST00000560801 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
TRPM1-212ENST00000560801 THEMISQ8N1K5 641 aaPredicted RBP13.3□□□□□ -0.28
TRPM1-212ENST00000560801 PKD2Q13563 968 aa13.3□□□□□ -0.28
TRPM1-212ENST00000560801 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
TRPM1-212ENST00000560801 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
TRPM1-212ENST00000560801 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
TRPM1-212ENST00000560801 ERICH3Q5RHP9 1530 aa13.27□□□□□ -0.28
TRPM1-212ENST00000560801 ATF3P18847 181 aa13.27□□□□□ -0.28
TRPM1-212ENST00000560801 PIP4K2BP78356 416 aa13.27□□□□□ -0.28
TRPM1-212ENST00000560801 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
TRPM1-212ENST00000560801 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms