RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 NISCHQ9Y2I1 1504 aa18.69■□□□□ 0.58
TRPM1-212ENST00000560801 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
TRPM1-212ENST00000560801 ABCC9O60706 1549 aa16.94■□□□□ 0.3
TRPM1-212ENST00000560801 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
TRPM1-212ENST00000560801 SUPT5HO00267 1087 aaKnown RBP16.6■□□□□ 0.25
TRPM1-212ENST00000560801 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRPM1-212ENST00000560801 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
TRPM1-212ENST00000560801 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
TRPM1-212ENST00000560801 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
TRPM1-212ENST00000560801 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
TRPM1-212ENST00000560801 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
TRPM1-212ENST00000560801 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
TRPM1-212ENST00000560801 TTBK1Q5TCY1 1321 aaPredicted RBP15.56■□□□□ 0.08
TRPM1-212ENST00000560801 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
TRPM1-212ENST00000560801 APLP2Q06481 763 aa15.55■□□□□ 0.08
TRPM1-212ENST00000560801 FBLN2P98095 1184 aa15.55■□□□□ 0.08
TRPM1-212ENST00000560801 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
TRPM1-212ENST00000560801 NACADO15069 1562 aa15.5■□□□□ 0.07
TRPM1-212ENST00000560801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
TRPM1-212ENST00000560801 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
TRPM1-212ENST00000560801 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
TRPM1-212ENST00000560801 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
TRPM1-212ENST00000560801 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.04
TRPM1-212ENST00000560801 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
TRPM1-212ENST00000560801 NPM1P06748 294 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRPM1-212ENST00000560801 CECR2Q9BXF3 1484 aa15.05■□□□□ -0
TRPM1-212ENST00000560801 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
TRPM1-212ENST00000560801 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
TRPM1-212ENST00000560801 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
TRPM1-212ENST00000560801 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
TRPM1-212ENST00000560801 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
TRPM1-212ENST00000560801 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
TRPM1-212ENST00000560801 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
TRPM1-212ENST00000560801 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
TRPM1-212ENST00000560801 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
TRPM1-212ENST00000560801 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
TRPM1-212ENST00000560801 P3H3Q8IVL6 736 aa14.72□□□□□ -0.05
TRPM1-212ENST00000560801 ESF1Q9H501 851 aaKnown RBP14.72□□□□□ -0.05
TRPM1-212ENST00000560801 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
TRPM1-212ENST00000560801 SMARCA2P51531 1590 aa14.67□□□□□ -0.06
TRPM1-212ENST00000560801 CDK11AQ9UQ88 783 aaPredicted RBP14.64□□□□□ -0.07
TRPM1-212ENST00000560801 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
TRPM1-212ENST00000560801 ITGAEP38570 1179 aa14.6□□□□□ -0.07
TRPM1-212ENST00000560801 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
TRPM1-212ENST00000560801 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
TRPM1-212ENST00000560801 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
TRPM1-212ENST00000560801 ZNF777Q9ULD5 760 aaPredicted RBP14.52□□□□□ -0.09
TRPM1-212ENST00000560801 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
TRPM1-212ENST00000560801 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
TRPM1-212ENST00000560801 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
TRPM1-212ENST00000560801 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
TRPM1-212ENST00000560801 CYB5RLQ6IPT4 315 aa14.48□□□□□ -0.09
TRPM1-212ENST00000560801 BCANQ96GW7 911 aa14.47□□□□□ -0.09
TRPM1-212ENST00000560801 ARID4BQ4LE39 1312 aaPredicted RBP14.45□□□□□ -0.1
TRPM1-212ENST00000560801 AEBP2Q6ZN18 517 aaPredicted RBP14.44□□□□□ -0.1
TRPM1-212ENST00000560801 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
TRPM1-212ENST00000560801 FAM50AQ14320 339 aaKnown RBP14.42□□□□□ -0.1
TRPM1-212ENST00000560801 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
TRPM1-212ENST00000560801 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
TRPM1-212ENST00000560801 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
TRPM1-212ENST00000560801 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
TRPM1-212ENST00000560801 LOC105371045A0A1W2PR82 267 aa14.38□□□□□ -0.11
TRPM1-212ENST00000560801 SOGA1O94964 1423 aa14.36□□□□□ -0.11
TRPM1-212ENST00000560801 PLEKHD1A6NEE1 506 aa14.35□□□□□ -0.11
TRPM1-212ENST00000560801 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
TRPM1-212ENST00000560801 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
TRPM1-212ENST00000560801 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
TRPM1-212ENST00000560801 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
TRPM1-212ENST00000560801 PCGF6Q9BYE7 350 aa14.3□□□□□ -0.12
TRPM1-212ENST00000560801 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
TRPM1-212ENST00000560801 CUX2O14529 1486 aa14.26□□□□□ -0.13
TRPM1-212ENST00000560801 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
TRPM1-212ENST00000560801 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
TRPM1-212ENST00000560801 TSPY4P0CV99 314 aa14.19□□□□□ -0.14
TRPM1-212ENST00000560801 TSPY10P0CW01 314 aa14.19□□□□□ -0.14
TRPM1-212ENST00000560801 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
TRPM1-212ENST00000560801 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
TRPM1-212ENST00000560801 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
TRPM1-212ENST00000560801 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
TRPM1-212ENST00000560801 NESP48681 1621 aa14.16□□□□□ -0.14
TRPM1-212ENST00000560801 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
TRPM1-212ENST00000560801 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
TRPM1-212ENST00000560801 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
TRPM1-212ENST00000560801 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
TRPM1-212ENST00000560801 MLECQ14165 292 aa14.13□□□□□ -0.15
TRPM1-212ENST00000560801 BICRAQ9NZM4 1560 aa14.12□□□□□ -0.15
TRPM1-212ENST00000560801 WIZO95785 1651 aa14.12□□□□□ -0.15
TRPM1-212ENST00000560801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRPM1-212ENST00000560801 MTUS2Q5JR59 1369 aa14.11□□□□□ -0.15
TRPM1-212ENST00000560801 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
TRPM1-212ENST00000560801 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
TRPM1-212ENST00000560801 FAM69CQ0P6D2 419 aa14.05□□□□□ -0.16
TRPM1-212ENST00000560801 C14orf37Q86TY3 774 aa14.02□□□□□ -0.16
TRPM1-212ENST00000560801 CFDP1Q9UEE9 299 aaPredicted RBP14.02□□□□□ -0.16
TRPM1-212ENST00000560801 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
TRPM1-212ENST00000560801 AQRO60306 1485 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRPM1-212ENST00000560801 EEA1Q15075 1411 aa14□□□□□ -0.17
TRPM1-212ENST00000560801 ZNF326Q5BKZ1 582 aaKnown RBP14□□□□□ -0.17
TRPM1-212ENST00000560801 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
TRPM1-212ENST00000560801 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms