RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
TRPM1-211ENST00000560658 CUL7Q14999 1698 aa25.87■■□□□ 1.73
TRPM1-211ENST00000560658 CFAP43Q8NDM7 1665 aa25.86■■□□□ 1.73
TRPM1-211ENST00000560658 AQRO60306 1485 aaKnown RBP eCLIP25.84■■□□□ 1.73
TRPM1-211ENST00000560658 MIER1Q8N108 512 aa25.81■■□□□ 1.72
TRPM1-211ENST00000560658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.79■■□□□ 1.72
TRPM1-211ENST00000560658 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
TRPM1-211ENST00000560658 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
TRPM1-211ENST00000560658 POLA1P09884 1462 aaPredicted RBP25.75■■□□□ 1.71
TRPM1-211ENST00000560658 LAMC3Q9Y6N6 1575 aa25.74■■□□□ 1.71
TRPM1-211ENST00000560658 SETD5Q9C0A6 1442 aa25.74■■□□□ 1.71
TRPM1-211ENST00000560658 CASKIN1Q8WXD9 1431 aa25.73■■□□□ 1.71
TRPM1-211ENST00000560658 PCF11O94913 1555 aaKnown RBP25.71■■□□□ 1.71
TRPM1-211ENST00000560658 RAB3GAP2Q9H2M9 1393 aa25.7■■□□□ 1.71
TRPM1-211ENST00000560658 CTTNBP2Q8WZ74 1663 aa25.69■■□□□ 1.7
TRPM1-211ENST00000560658 TIMELESSQ9UNS1 1208 aa25.68■■□□□ 1.7
TRPM1-211ENST00000560658 FMN1Q68DA7 1419 aa25.67■■□□□ 1.7
TRPM1-211ENST00000560658 WDR97A6NE52 1622 aa25.64■■□□□ 1.7
TRPM1-211ENST00000560658 PHLDB1Q86UU1 1377 aa25.63■■□□□ 1.69
TRPM1-211ENST00000560658 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
TRPM1-211ENST00000560658 MAPKBP1O60336 1514 aa25.62■■□□□ 1.69
TRPM1-211ENST00000560658 YTHDC1Q96MU7 727 aaKnown RBP25.58■■□□□ 1.69
TRPM1-211ENST00000560658 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
TRPM1-211ENST00000560658 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
TRPM1-211ENST00000560658 FHOD3Q2V2M9 1422 aa25.55■■□□□ 1.68
TRPM1-211ENST00000560658 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
TRPM1-211ENST00000560658 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
TRPM1-211ENST00000560658 SAMD9Q5K651 1589 aa25.52■■□□□ 1.68
TRPM1-211ENST00000560658 ITGAEP38570 1179 aa25.51■■□□□ 1.67
TRPM1-211ENST00000560658 URB2Q14146 1524 aaKnown RBP25.5■■□□□ 1.67
TRPM1-211ENST00000560658 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
TRPM1-211ENST00000560658 NESP48681 1621 aa25.48■■□□□ 1.67
TRPM1-211ENST00000560658 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
TRPM1-211ENST00000560658 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
TRPM1-211ENST00000560658 GAPVD1Q14C86 1478 aa25.45■■□□□ 1.66
TRPM1-211ENST00000560658 FGD6Q6ZV73 1430 aa25.44■■□□□ 1.66
TRPM1-211ENST00000560658 P3H3Q8IVL6 736 aa25.39■■□□□ 1.66
TRPM1-211ENST00000560658 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
TRPM1-211ENST00000560658 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
TRPM1-211ENST00000560658 MTUS2Q5JR59 1369 aa25.37■■□□□ 1.65
TRPM1-211ENST00000560658 CCDC18Q5T9S5 1454 aa25.35■■□□□ 1.65
TRPM1-211ENST00000560658 ATP1B4Q9UN42 357 aaPredicted RBP25.35■■□□□ 1.65
TRPM1-211ENST00000560658 HFM1A2PYH4 1435 aa25.34■■□□□ 1.65
TRPM1-211ENST00000560658 SUPT6HQ7KZ85 1726 aaKnown RBP25.32■■□□□ 1.64
TRPM1-211ENST00000560658 MYOM3Q5VTT5 1437 aa25.31■■□□□ 1.64
TRPM1-211ENST00000560658 UACAQ9BZF9 1416 aa25.29■■□□□ 1.64
TRPM1-211ENST00000560658 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
TRPM1-211ENST00000560658 TDRD9Q8NDG6 1382 aaKnown RBP25.28■■□□□ 1.64
TRPM1-211ENST00000560658 MYT1Q01538 1121 aa25.27■■□□□ 1.64
TRPM1-211ENST00000560658 NCOA2Q15596 1464 aa25.27■■□□□ 1.64
TRPM1-211ENST00000560658 ARHGEF11O15085 1522 aa25.26■■□□□ 1.63
TRPM1-211ENST00000560658 PPP1R15AO75807 674 aaPredicted RBP25.24■■□□□ 1.63
TRPM1-211ENST00000560658 PTPN23Q9H3S7 1636 aa25.24■■□□□ 1.63
TRPM1-211ENST00000560658 UGGT2Q9NYU1 1516 aa25.23■■□□□ 1.63
TRPM1-211ENST00000560658 AKNAQ7Z591 1439 aa25.22■■□□□ 1.63
TRPM1-211ENST00000560658 HECW1Q76N89 1606 aa25.22■■□□□ 1.63
TRPM1-211ENST00000560658 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.63
TRPM1-211ENST00000560658 LRRIQ1Q96JM4 1722 aa25.19■■□□□ 1.62
TRPM1-211ENST00000560658 SIN3AQ96ST3 1273 aa25.18■■□□□ 1.62
TRPM1-211ENST00000560658 NAIPQ13075 1403 aa25.17■■□□□ 1.62
TRPM1-211ENST00000560658 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
TRPM1-211ENST00000560658 PBRM1Q86U86 1689 aa25.16■■□□□ 1.62
TRPM1-211ENST00000560658 IQGAP2Q13576 1575 aa25.15■■□□□ 1.62
TRPM1-211ENST00000560658 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
TRPM1-211ENST00000560658 MIA2Q96PC5 1412 aa25.13■■□□□ 1.61
TRPM1-211ENST00000560658 CCER2I3L3R5 266 aa25.12■■□□□ 1.61
TRPM1-211ENST00000560658 PTPRKQ15262 1439 aa25.11■■□□□ 1.61
TRPM1-211ENST00000560658 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
TRPM1-211ENST00000560658 GCC2Q8IWJ2 1684 aa25.09■■□□□ 1.61
TRPM1-211ENST00000560658 EPRSP07814 1512 aaKnown RBP25.05■■□□□ 1.6
TRPM1-211ENST00000560658 SUPT16HQ9Y5B9 1047 aaKnown RBP25.04■■□□□ 1.6
TRPM1-211ENST00000560658 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
TRPM1-211ENST00000560658 WDR62O43379 1518 aa25.02■■□□□ 1.6
TRPM1-211ENST00000560658 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
TRPM1-211ENST00000560658 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
TRPM1-211ENST00000560658 ANP32CO43423 234 aa25■■□□□ 1.59
TRPM1-211ENST00000560658 KIAA0586Q9BVV6 1533 aa24.94■■□□□ 1.58
TRPM1-211ENST00000560658 ROCK1Q13464 1354 aa24.94■■□□□ 1.58
TRPM1-211ENST00000560658 KDM5BQ9UGL1 1544 aa24.9■■□□□ 1.58
TRPM1-211ENST00000560658 KIAA0556O60303 1618 aa24.86■■□□□ 1.57
TRPM1-211ENST00000560658 CDK11AQ9UQ88 783 aaPredicted RBP24.83■■□□□ 1.57
TRPM1-211ENST00000560658 CDK13Q14004 1512 aaKnown RBP24.83■■□□□ 1.57
TRPM1-211ENST00000560658 DNMT1P26358 1616 aaKnown RBP24.81■■□□□ 1.56
TRPM1-211ENST00000560658 KCNH8Q96L42 1107 aa24.8■■□□□ 1.56
TRPM1-211ENST00000560658 DISP1Q96F81 1524 aa24.8■■□□□ 1.56
TRPM1-211ENST00000560658 DAPK1P53355 1430 aa24.79■■□□□ 1.56
TRPM1-211ENST00000560658 RAPGEF6Q8TEU7 1601 aa24.78■■□□□ 1.56
TRPM1-211ENST00000560658 DENND4BO75064 1496 aaPredicted RBP24.78■■□□□ 1.56
TRPM1-211ENST00000560658 RRP7BPQ9NSQ0 103 aa24.77■■□□□ 1.56
TRPM1-211ENST00000560658 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
TRPM1-211ENST00000560658 MPHOSPH9Q99550 1183 aa24.75■■□□□ 1.55
TRPM1-211ENST00000560658 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
TRPM1-211ENST00000560658 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
TRPM1-211ENST00000560658 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
TRPM1-211ENST00000560658 NEFLP07196 543 aa24.74■■□□□ 1.55
TRPM1-211ENST00000560658 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
TRPM1-211ENST00000560658 ABCC5O15440 1437 aa24.7■■□□□ 1.55
TRPM1-211ENST00000560658 ITSN2Q9NZM3 1697 aa24.7■■□□□ 1.54
TRPM1-211ENST00000560658 RPRD2Q5VT52 1461 aaKnown RBP24.7■■□□□ 1.54
TRPM1-211ENST00000560658 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms