RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 PPP1R15AO75807 674 aaPredicted RBP31.06■■■□□ 2.56
PSMA4-215ENST00000559934 PHLDB1Q86UU1 1377 aa31.02■■■□□ 2.56
PSMA4-215ENST00000559934 TRIM52Q96A61 297 aa31.01■■■□□ 2.55
PSMA4-215ENST00000559934 FAM50AQ14320 339 aaKnown RBP31■■■□□ 2.55
PSMA4-215ENST00000559934 NEFLP07196 543 aa30.97■■■□□ 2.55
PSMA4-215ENST00000559934 RBM19Q9Y4C8 960 aaKnown RBP30.97■■■□□ 2.55
PSMA4-215ENST00000559934 LRRC9Q6ZRR7 1453 aa30.97■■■□□ 2.55
PSMA4-215ENST00000559934 MAP3K1Q13233 1512 aa30.95■■■□□ 2.54
PSMA4-215ENST00000559934 BCL11AQ9H165 835 aa30.93■■■□□ 2.54
PSMA4-215ENST00000559934 IGF1RP08069 1367 aa30.89■■■□□ 2.53
PSMA4-215ENST00000559934 CCER2I3L3R5 266 aa30.87■■■□□ 2.53
PSMA4-215ENST00000559934 ANP32CO43423 234 aa30.86■■■□□ 2.53
PSMA4-215ENST00000559934 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
PSMA4-215ENST00000559934 CFTRP13569 1480 aa30.85■■■□□ 2.53
PSMA4-215ENST00000559934 NCAPD3P42695 1498 aa30.82■■■□□ 2.52
PSMA4-215ENST00000559934 TIMELESSQ9UNS1 1208 aa30.79■■■□□ 2.52
PSMA4-215ENST00000559934 P3H3Q8IVL6 736 aa30.79■■■□□ 2.52
PSMA4-215ENST00000559934 ATP1B4Q9UN42 357 aaPredicted RBP30.78■■■□□ 2.52
PSMA4-215ENST00000559934 CFAP43Q8NDM7 1665 aa30.77■■■□□ 2.52
PSMA4-215ENST00000559934 CARMIL1Q5VZK9 1371 aa30.77■■■□□ 2.52
PSMA4-215ENST00000559934 PCF11O94913 1555 aaKnown RBP30.76■■■□□ 2.52
PSMA4-215ENST00000559934 FHAD1B1AJZ9 1412 aa30.7■■■□□ 2.5
PSMA4-215ENST00000559934 MSH5O43196 834 aa30.67■■■□□ 2.5
PSMA4-215ENST00000559934 TONSLQ96HA7 1378 aa30.63■■■□□ 2.49
PSMA4-215ENST00000559934 FHOD3Q2V2M9 1422 aa30.6■■■□□ 2.49
PSMA4-215ENST00000559934 FGD5Q6ZNL6 1462 aa30.59■■■□□ 2.49
PSMA4-215ENST00000559934 IRX6P78412 446 aaPredicted RBP30.59■■■□□ 2.49
PSMA4-215ENST00000559934 PRDM2Q13029 1718 aa30.59■■■□□ 2.49
PSMA4-215ENST00000559934 HNRNPUQ00839 825 aaKnown RBP eCLIP30.54■■■□□ 2.48
PSMA4-215ENST00000559934 CCDC18Q5T9S5 1454 aa30.52■■■□□ 2.48
PSMA4-215ENST00000559934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.5■■■□□ 2.471e-6■■□□□ 12.1
PSMA4-215ENST00000559934 FYCO1Q9BQS8 1478 aa30.5■■■□□ 2.47
PSMA4-215ENST00000559934 FGD6Q6ZV73 1430 aa30.47■■■□□ 2.47
PSMA4-215ENST00000559934 PTPRKQ15262 1439 aa30.46■■■□□ 2.47
PSMA4-215ENST00000559934 CASKIN1Q8WXD9 1431 aa30.44■■■□□ 2.46
PSMA4-215ENST00000559934 UACAQ9BZF9 1416 aa30.43■■■□□ 2.46
PSMA4-215ENST00000559934 CDK11AQ9UQ88 783 aaPredicted RBP30.42■■■□□ 2.46
PSMA4-215ENST00000559934 FANCIQ9NVI1 1328 aa30.41■■■□□ 2.46
PSMA4-215ENST00000559934 PTPN23Q9H3S7 1636 aa30.4■■■□□ 2.46
PSMA4-215ENST00000559934 HFM1A2PYH4 1435 aa30.39■■■□□ 2.46
PSMA4-215ENST00000559934 KDM5BQ9UGL1 1544 aa30.38■■■□□ 2.45
PSMA4-215ENST00000559934 CADPSQ9ULU8 1353 aa30.37■■■□□ 2.45
PSMA4-215ENST00000559934 AQRO60306 1485 aaKnown RBP eCLIP30.36■■■□□ 2.454e-7■■■■□ 26.1
PSMA4-215ENST00000559934 EFCAB5A4FU69 1503 aa30.34■■■□□ 2.45
PSMA4-215ENST00000559934 WASHC2AQ641Q2 1341 aa30.33■■■□□ 2.45
PSMA4-215ENST00000559934 NAIPQ13075 1403 aa30.31■■■□□ 2.44
PSMA4-215ENST00000559934 MTUS2Q5JR59 1369 aa30.3■■■□□ 2.44
PSMA4-215ENST00000559934 HSPA5P11021 654 aaKnown RBP30.29■■■□□ 2.44
PSMA4-215ENST00000559934 ERICH6Q7L0X2 663 aa30.29■■■□□ 2.44
PSMA4-215ENST00000559934 CCDC184Q52MB2 194 aa30.28■■■□□ 2.44
PSMA4-215ENST00000559934 RAD54L2Q9Y4B4 1467 aa30.27■■■□□ 2.44
PSMA4-215ENST00000559934 SNAPC4Q5SXM2 1469 aa30.25■■■□□ 2.43
PSMA4-215ENST00000559934 CTTNBP2Q8WZ74 1663 aa30.23■■■□□ 2.43
PSMA4-215ENST00000559934 FMN1Q68DA7 1419 aa30.22■■■□□ 2.43
PSMA4-215ENST00000559934 LRRIQ1Q96JM4 1722 aa30.2■■■□□ 2.43
PSMA4-215ENST00000559934 PPP4R2Q9NY27 417 aa30.2■■■□□ 2.42
PSMA4-215ENST00000559934 NCOA2Q15596 1464 aa30.19■■■□□ 2.42
PSMA4-215ENST00000559934 MYOM3Q5VTT5 1437 aa30.17■■■□□ 2.42
PSMA4-215ENST00000559934 RRP7BPQ9NSQ0 103 aa30.15■■■□□ 2.42
PSMA4-215ENST00000559934 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.41
PSMA4-215ENST00000559934 ERICH6BQ5W0A0 696 aa30.14■■■□□ 2.41
PSMA4-215ENST00000559934 FANCD2Q9BXW9 1451 aa30.13■■■□□ 2.41
PSMA4-215ENST00000559934 CNTLNQ9NXG0 1405 aa30.13■■■□□ 2.41
PSMA4-215ENST00000559934 B4GALNT3Q6L9W6 998 aa30.13■■■□□ 2.41
PSMA4-215ENST00000559934 FAM9BQ8IZU0 186 aa30.12■■■□□ 2.41
PSMA4-215ENST00000559934 EIF4G2P78344 907 aaKnown RBP eCLIP30.11■■■□□ 2.41
PSMA4-215ENST00000559934 DENND4BO75064 1496 aaPredicted RBP30.11■■■□□ 2.41
PSMA4-215ENST00000559934 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
PSMA4-215ENST00000559934 CHIC2Q9UKJ5 165 aa30.1■■■□□ 2.41
PSMA4-215ENST00000559934 CUL7Q14999 1698 aa30.1■■■□□ 2.41
PSMA4-215ENST00000559934 POLA1P09884 1462 aaPredicted RBP30.09■■■□□ 2.41
PSMA4-215ENST00000559934 C11orf95C9JLR9 678 aaPredicted RBP30.09■■■□□ 2.41
PSMA4-215ENST00000559934 SUPT6HQ7KZ85 1726 aaKnown RBP30.06■■■□□ 2.4
PSMA4-215ENST00000559934 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
PSMA4-215ENST00000559934 PRKRIP1Q9H875 184 aaPredicted RBP30.05■■■□□ 2.4
PSMA4-215ENST00000559934 GRIN2BQ13224 1484 aa30.03■■■□□ 2.4
PSMA4-215ENST00000559934 MRS2Q9HD23 443 aa30.03■■■□□ 2.4
PSMA4-215ENST00000559934 KDM6BO15054 1643 aa30.02■■■□□ 2.4
PSMA4-215ENST00000559934 TOPBP1Q92547 1522 aa30.02■■■□□ 2.4
PSMA4-215ENST00000559934 HECW1Q76N89 1606 aa30.01■■■□□ 2.39
PSMA4-215ENST00000559934 SAMD9Q5K651 1589 aa30■■■□□ 2.39
PSMA4-215ENST00000559934 CCDC7Q96M83 1385 aa30■■■□□ 2.39
PSMA4-215ENST00000559934 L3MBTL2Q969R5 705 aa30■■■□□ 2.39
PSMA4-215ENST00000559934 ZBED9Q6R2W3 1325 aa29.99■■■□□ 2.39
PSMA4-215ENST00000559934 EHBP1L1Q8N3D4 1523 aa29.98■■■□□ 2.39
PSMA4-215ENST00000559934 FOXD1Q16676 465 aa29.98■■■□□ 2.39
PSMA4-215ENST00000559934 NCOA1Q15788 1441 aa29.97■■■□□ 2.39
PSMA4-215ENST00000559934 GCC2Q8IWJ2 1684 aa29.97■■■□□ 2.39
PSMA4-215ENST00000559934 UGGT2Q9NYU1 1516 aa29.97■■■□□ 2.39
PSMA4-215ENST00000559934 MAGI3Q5TCQ9 1506 aa29.96■■■□□ 2.39
PSMA4-215ENST00000559934 MPHOSPH9Q99550 1183 aa29.93■■■□□ 2.38
PSMA4-215ENST00000559934 ARHGEF11O15085 1522 aa29.91■■■□□ 2.38
PSMA4-215ENST00000559934 DEKP35659 375 aaKnown RBP29.9■■■□□ 2.38
PSMA4-215ENST00000559934 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
PSMA4-215ENST00000559934 NBPF8Q3BBV2 869 aa29.87■■■□□ 2.37
PSMA4-215ENST00000559934 TCOF1Q13428 1488 aaKnown RBP29.86■■■□□ 2.37
PSMA4-215ENST00000559934 PAK3O75914 559 aaPredicted RBP29.83■■■□□ 2.37
PSMA4-215ENST00000559934 KIF7Q2M1P5 1343 aa29.83■■■□□ 2.37
PSMA4-215ENST00000559934 NESP48681 1621 aa29.83■■■□□ 2.37
PSMA4-215ENST00000559934 TDRD9Q8NDG6 1382 aaKnown RBP29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms