RNA–Protein interactions for RNA: ENST00000559488.5

ITGB3-201, Transcript of integrin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB3, Length 3,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-201ENST00000559488 FBLN2P98095 1184 aa20.02■□□□□ 0.79
ITGB3-201ENST00000559488 ZNF326Q5BKZ1 582 aaKnown RBP20.01■□□□□ 0.79
ITGB3-201ENST00000559488 IGF1RP08069 1367 aa20■□□□□ 0.79
ITGB3-201ENST00000559488 NCAPD3P42695 1498 aa20■□□□□ 0.79
ITGB3-201ENST00000559488 PRXQ9BXM0 1461 aa20■□□□□ 0.79
ITGB3-201ENST00000559488 KCNH8Q96L42 1107 aa20■□□□□ 0.79
ITGB3-201ENST00000559488 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
ITGB3-201ENST00000559488 PEG3Q9GZU2 1588 aa19.98■□□□□ 0.79
ITGB3-201ENST00000559488 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
ITGB3-201ENST00000559488 SUPT16HQ9Y5B9 1047 aaKnown RBP19.97■□□□□ 0.79
ITGB3-201ENST00000559488 CUX1P39880 1505 aa19.97■□□□□ 0.79
ITGB3-201ENST00000559488 FHOD3Q2V2M9 1422 aa19.96■□□□□ 0.79
ITGB3-201ENST00000559488 ERICH6Q7L0X2 663 aa19.94■□□□□ 0.78
ITGB3-201ENST00000559488 ZNF777Q9ULD5 760 aaPredicted RBP19.93■□□□□ 0.78
ITGB3-201ENST00000559488 ARHGAP35Q9NRY4 1499 aa19.93■□□□□ 0.78
ITGB3-201ENST00000559488 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
ITGB3-201ENST00000559488 HNRNPUQ00839 825 aaKnown RBP eCLIP19.91■□□□□ 0.78
ITGB3-201ENST00000559488 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
ITGB3-201ENST00000559488 CFTRP13569 1480 aa19.89■□□□□ 0.78
ITGB3-201ENST00000559488 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.78
ITGB3-201ENST00000559488 PHLDB1Q86UU1 1377 aa19.85■□□□□ 0.77
ITGB3-201ENST00000559488 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.77
ITGB3-201ENST00000559488 IRX6P78412 446 aaPredicted RBP19.83■□□□□ 0.77
ITGB3-201ENST00000559488 RRBP1Q9P2E9 1410 aaKnown RBP19.82■□□□□ 0.76
ITGB3-201ENST00000559488 FANCD2Q9BXW9 1451 aa19.82■□□□□ 0.76
ITGB3-201ENST00000559488 FAM9BQ8IZU0 186 aa19.81■□□□□ 0.76
ITGB3-201ENST00000559488 PPP1R15AO75807 674 aaPredicted RBP19.8■□□□□ 0.76
ITGB3-201ENST00000559488 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
ITGB3-201ENST00000559488 FOXD1Q16676 465 aa19.75■□□□□ 0.75
ITGB3-201ENST00000559488 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
ITGB3-201ENST00000559488 LRRC9Q6ZRR7 1453 aa19.74■□□□□ 0.75
ITGB3-201ENST00000559488 EIF4G2P78344 907 aaKnown RBP eCLIP19.73■□□□□ 0.75
ITGB3-201ENST00000559488 TIMELESSQ9UNS1 1208 aa19.72■□□□□ 0.75
ITGB3-201ENST00000559488 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
ITGB3-201ENST00000559488 FMN1Q68DA7 1419 aa19.7■□□□□ 0.74
ITGB3-201ENST00000559488 SENP3-EIF4A1A0A087X0R7 540 aa19.7■□□□□ 0.74
ITGB3-201ENST00000559488 BIVM-ERCC5R4GMW8 1640 aa19.7■□□□□ 0.74
ITGB3-201ENST00000559488 MRS2Q9HD23 443 aa19.67■□□□□ 0.74
ITGB3-201ENST00000559488 NESP48681 1621 aa19.66■□□□□ 0.74
ITGB3-201ENST00000559488 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
ITGB3-201ENST00000559488 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
ITGB3-201ENST00000559488 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
ITGB3-201ENST00000559488 MYT1LQ9UL68 1186 aa19.6■□□□□ 0.73
ITGB3-201ENST00000559488 KDM2AQ9Y2K7 1162 aa19.6■□□□□ 0.73
ITGB3-201ENST00000559488 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
ITGB3-201ENST00000559488 TSHZ2Q9NRE2 1034 aa19.58■□□□□ 0.73
ITGB3-201ENST00000559488 CFDP1Q9UEE9 299 aaPredicted RBP19.57■□□□□ 0.72
ITGB3-201ENST00000559488 FGD6Q6ZV73 1430 aa19.56■□□□□ 0.72
ITGB3-201ENST00000559488 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
ITGB3-201ENST00000559488 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
ITGB3-201ENST00000559488 CCDC18Q5T9S5 1454 aa19.56■□□□□ 0.72
ITGB3-201ENST00000559488 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
ITGB3-201ENST00000559488 SALL2Q9Y467 1007 aaPredicted RBP19.53■□□□□ 0.72
ITGB3-201ENST00000559488 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
ITGB3-201ENST00000559488 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
ITGB3-201ENST00000559488 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
ITGB3-201ENST00000559488 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
ITGB3-201ENST00000559488 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
ITGB3-201ENST00000559488 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
ITGB3-201ENST00000559488 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
ITGB3-201ENST00000559488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
ITGB3-201ENST00000559488 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
ITGB3-201ENST00000559488 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
ITGB3-201ENST00000559488 PCF11O94913 1555 aaKnown RBP19.47■□□□□ 0.71
ITGB3-201ENST00000559488 FYCO1Q9BQS8 1478 aa19.45■□□□□ 0.7
ITGB3-201ENST00000559488 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
ITGB3-201ENST00000559488 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
ITGB3-201ENST00000559488 NCOA2Q15596 1464 aa19.43■□□□□ 0.7
ITGB3-201ENST00000559488 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
ITGB3-201ENST00000559488 UACAQ9BZF9 1416 aa19.41■□□□□ 0.7
ITGB3-201ENST00000559488 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
ITGB3-201ENST00000559488 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
ITGB3-201ENST00000559488 MAPKBP1O60336 1514 aa19.4■□□□□ 0.7
ITGB3-201ENST00000559488 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.7
ITGB3-201ENST00000559488 RBM19Q9Y4C8 960 aaKnown RBP19.39■□□□□ 0.7
ITGB3-201ENST00000559488 ANP32EQ9BTT0 268 aa19.38■□□□□ 0.69
ITGB3-201ENST00000559488 DNMBPQ6XZF7 1577 aa19.37■□□□□ 0.69
ITGB3-201ENST00000559488 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
ITGB3-201ENST00000559488 PKD2Q13563 968 aa19.36■□□□□ 0.69
ITGB3-201ENST00000559488 B4GALNT3Q6L9W6 998 aa19.36■□□□□ 0.69
ITGB3-201ENST00000559488 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
ITGB3-201ENST00000559488 MAP3K1Q13233 1512 aa19.34■□□□□ 0.69
ITGB3-201ENST00000559488 EFCAB5A4FU69 1503 aa19.34■□□□□ 0.69
ITGB3-201ENST00000559488 CCDC136Q96JN2 1154 aa19.33■□□□□ 0.68
ITGB3-201ENST00000559488 WASHC2AQ641Q2 1341 aa19.32■□□□□ 0.68
ITGB3-201ENST00000559488 HFM1A2PYH4 1435 aa19.31■□□□□ 0.68
ITGB3-201ENST00000559488 NAIPQ13075 1403 aa19.29■□□□□ 0.68
ITGB3-201ENST00000559488 DCAF11Q8TEB1 546 aa19.28■□□□□ 0.68
ITGB3-201ENST00000559488 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
ITGB3-201ENST00000559488 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.67
ITGB3-201ENST00000559488 PTPRKQ15262 1439 aa19.27■□□□□ 0.67
ITGB3-201ENST00000559488 PRKRIP1Q9H875 184 aaPredicted RBP19.26■□□□□ 0.67
ITGB3-201ENST00000559488 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
ITGB3-201ENST00000559488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.24■□□□□ 0.67
ITGB3-201ENST00000559488 URB2Q14146 1524 aaKnown RBP19.24■□□□□ 0.67
ITGB3-201ENST00000559488 CCDC184Q52MB2 194 aa19.24■□□□□ 0.67
ITGB3-201ENST00000559488 NUP155O75694 1391 aa19.21■□□□□ 0.67
ITGB3-201ENST00000559488 NBPF8Q3BBV2 869 aa19.21■□□□□ 0.67
ITGB3-201ENST00000559488 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
ITGB3-201ENST00000559488 HNRNPMP52272 730 aaKnown RBP eCLIP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms