RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
SEC11A-206ENST00000558924 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.36
SEC11A-206ENST00000558924 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
SEC11A-206ENST00000558924 IGF1RP08069 1367 aa17.26■□□□□ 0.35
SEC11A-206ENST00000558924 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
SEC11A-206ENST00000558924 IRX6P78412 446 aaPredicted RBP17.25■□□□□ 0.35
SEC11A-206ENST00000558924 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
SEC11A-206ENST00000558924 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
SEC11A-206ENST00000558924 NESP48681 1621 aa17.22■□□□□ 0.35
SEC11A-206ENST00000558924 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.35
SEC11A-206ENST00000558924 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
SEC11A-206ENST00000558924 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
SEC11A-206ENST00000558924 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
SEC11A-206ENST00000558924 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
SEC11A-206ENST00000558924 CFTRP13569 1480 aa17.19■□□□□ 0.34
SEC11A-206ENST00000558924 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
SEC11A-206ENST00000558924 RAB3GAP2Q9H2M9 1393 aa17.18■□□□□ 0.34
SEC11A-206ENST00000558924 ARHGAP35Q9NRY4 1499 aa17.16■□□□□ 0.34
SEC11A-206ENST00000558924 SENP3-EIF4A1A0A087X0R7 540 aa17.16■□□□□ 0.34
SEC11A-206ENST00000558924 MTUS2Q5JR59 1369 aa17.16■□□□□ 0.34
SEC11A-206ENST00000558924 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
SEC11A-206ENST00000558924 FANCD2Q9BXW9 1451 aa17.13■□□□□ 0.33
SEC11A-206ENST00000558924 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
SEC11A-206ENST00000558924 MSH5O43196 834 aa17.1■□□□□ 0.33
SEC11A-206ENST00000558924 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
SEC11A-206ENST00000558924 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
SEC11A-206ENST00000558924 FOXD1Q16676 465 aa17.06■□□□□ 0.32
SEC11A-206ENST00000558924 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
SEC11A-206ENST00000558924 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
SEC11A-206ENST00000558924 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
SEC11A-206ENST00000558924 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
SEC11A-206ENST00000558924 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
SEC11A-206ENST00000558924 ANP32CO43423 234 aa17.01■□□□□ 0.31
SEC11A-206ENST00000558924 SETD5Q9C0A6 1442 aa17.01■□□□□ 0.31
SEC11A-206ENST00000558924 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
SEC11A-206ENST00000558924 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
SEC11A-206ENST00000558924 HNRNPUQ00839 825 aaKnown RBP eCLIP16.96■□□□□ 0.31
SEC11A-206ENST00000558924 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
SEC11A-206ENST00000558924 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
SEC11A-206ENST00000558924 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
SEC11A-206ENST00000558924 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
SEC11A-206ENST00000558924 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
SEC11A-206ENST00000558924 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
SEC11A-206ENST00000558924 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
SEC11A-206ENST00000558924 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
SEC11A-206ENST00000558924 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
SEC11A-206ENST00000558924 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
SEC11A-206ENST00000558924 DEKP35659 375 aaKnown RBP16.83■□□□□ 0.28
SEC11A-206ENST00000558924 TIAM1Q13009 1591 aa16.82■□□□□ 0.28
SEC11A-206ENST00000558924 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
SEC11A-206ENST00000558924 NBR1Q14596 966 aa16.81■□□□□ 0.28
SEC11A-206ENST00000558924 ZNF644Q9H582 1327 aaPredicted RBP16.81■□□□□ 0.28
SEC11A-206ENST00000558924 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
SEC11A-206ENST00000558924 PDS5BQ9NTI5 1447 aa16.81■□□□□ 0.28
SEC11A-206ENST00000558924 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
SEC11A-206ENST00000558924 SALL2Q9Y467 1007 aaPredicted RBP16.8■□□□□ 0.28
SEC11A-206ENST00000558924 PCF11O94913 1555 aaKnown RBP16.79■□□□□ 0.28
SEC11A-206ENST00000558924 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
SEC11A-206ENST00000558924 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
SEC11A-206ENST00000558924 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
SEC11A-206ENST00000558924 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
SEC11A-206ENST00000558924 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
SEC11A-206ENST00000558924 FGD6Q6ZV73 1430 aa16.74■□□□□ 0.27
SEC11A-206ENST00000558924 MYT1LQ9UL68 1186 aa16.73■□□□□ 0.27
SEC11A-206ENST00000558924 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
SEC11A-206ENST00000558924 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
SEC11A-206ENST00000558924 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
SEC11A-206ENST00000558924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEC11A-206ENST00000558924 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
SEC11A-206ENST00000558924 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
SEC11A-206ENST00000558924 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
SEC11A-206ENST00000558924 CCDC18Q5T9S5 1454 aa16.7■□□□□ 0.26
SEC11A-206ENST00000558924 L3MBTL2Q969R5 705 aa16.7■□□□□ 0.26
SEC11A-206ENST00000558924 CASKIN1Q8WXD9 1431 aa16.7■□□□□ 0.26
SEC11A-206ENST00000558924 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
SEC11A-206ENST00000558924 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.26
SEC11A-206ENST00000558924 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
SEC11A-206ENST00000558924 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
SEC11A-206ENST00000558924 PTPRKQ15262 1439 aa16.67■□□□□ 0.26
SEC11A-206ENST00000558924 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
SEC11A-206ENST00000558924 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
SEC11A-206ENST00000558924 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
SEC11A-206ENST00000558924 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
SEC11A-206ENST00000558924 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
SEC11A-206ENST00000558924 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
SEC11A-206ENST00000558924 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
SEC11A-206ENST00000558924 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
SEC11A-206ENST00000558924 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
SEC11A-206ENST00000558924 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
SEC11A-206ENST00000558924 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
SEC11A-206ENST00000558924 PKD2Q13563 968 aa16.56■□□□□ 0.24
SEC11A-206ENST00000558924 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
SEC11A-206ENST00000558924 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
SEC11A-206ENST00000558924 TSPY4P0CV99 314 aa16.56■□□□□ 0.24
SEC11A-206ENST00000558924 TSPY10P0CW01 314 aa16.56■□□□□ 0.24
SEC11A-206ENST00000558924 JPH4Q96JJ6 628 aa16.56■□□□□ 0.24
SEC11A-206ENST00000558924 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
SEC11A-206ENST00000558924 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEC11A-206ENST00000558924 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
SEC11A-206ENST00000558924 NAIPQ13075 1403 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms