RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
HMG20A-206ENST00000558845 LOC105371045A0A1W2PR82 267 aa18.19■□□□□ 0.5
HMG20A-206ENST00000558845 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
HMG20A-206ENST00000558845 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
HMG20A-206ENST00000558845 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
HMG20A-206ENST00000558845 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
HMG20A-206ENST00000558845 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
HMG20A-206ENST00000558845 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
HMG20A-206ENST00000558845 ADAMTS12P58397 1594 aa18.14■□□□□ 0.49
HMG20A-206ENST00000558845 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
HMG20A-206ENST00000558845 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
HMG20A-206ENST00000558845 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
HMG20A-206ENST00000558845 SYNJ2O15056 1496 aa18.05■□□□□ 0.48
HMG20A-206ENST00000558845 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
HMG20A-206ENST00000558845 GRIN2AQ12879 1464 aa18■□□□□ 0.47
HMG20A-206ENST00000558845 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
HMG20A-206ENST00000558845 CTTNBP2Q8WZ74 1663 aa17.96■□□□□ 0.47
HMG20A-206ENST00000558845 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
HMG20A-206ENST00000558845 NUP160Q12769 1436 aa17.93■□□□□ 0.46
HMG20A-206ENST00000558845 CLIP1P30622 1438 aa17.91■□□□□ 0.46
HMG20A-206ENST00000558845 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
HMG20A-206ENST00000558845 KIAA0586Q9BVV6 1533 aa17.9■□□□□ 0.46
HMG20A-206ENST00000558845 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
HMG20A-206ENST00000558845 IQGAP2Q13576 1575 aa17.87■□□□□ 0.45
HMG20A-206ENST00000558845 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
HMG20A-206ENST00000558845 CHD1O14646 1710 aa17.84■□□□□ 0.45
HMG20A-206ENST00000558845 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.45
HMG20A-206ENST00000558845 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.45
HMG20A-206ENST00000558845 SAMD9Q5K651 1589 aa17.81■□□□□ 0.44
HMG20A-206ENST00000558845 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
HMG20A-206ENST00000558845 FBLN2P98095 1184 aa17.79■□□□□ 0.44
HMG20A-206ENST00000558845 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
HMG20A-206ENST00000558845 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
HMG20A-206ENST00000558845 CLASP1Q7Z460 1538 aa17.73■□□□□ 0.43
HMG20A-206ENST00000558845 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
HMG20A-206ENST00000558845 DISP1Q96F81 1524 aa17.7■□□□□ 0.42
HMG20A-206ENST00000558845 KIAA0556O60303 1618 aa17.69■□□□□ 0.42
HMG20A-206ENST00000558845 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
HMG20A-206ENST00000558845 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
HMG20A-206ENST00000558845 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
HMG20A-206ENST00000558845 RANGAP1P46060 587 aaPredicted RBP17.66■□□□□ 0.42
HMG20A-206ENST00000558845 FHOD3Q2V2M9 1422 aa17.65■□□□□ 0.42
HMG20A-206ENST00000558845 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
HMG20A-206ENST00000558845 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
HMG20A-206ENST00000558845 CASKIN1Q8WXD9 1431 aa17.6■□□□□ 0.41
HMG20A-206ENST00000558845 FYCO1Q9BQS8 1478 aa17.6■□□□□ 0.41
HMG20A-206ENST00000558845 MAP3K1Q13233 1512 aa17.59■□□□□ 0.41
HMG20A-206ENST00000558845 PRG4Q92954 1404 aaPredicted RBP17.59■□□□□ 0.41
HMG20A-206ENST00000558845 P3H3Q8IVL6 736 aa17.57■□□□□ 0.4
HMG20A-206ENST00000558845 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
HMG20A-206ENST00000558845 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
HMG20A-206ENST00000558845 ABCA8O94911 1581 aa17.48■□□□□ 0.39
HMG20A-206ENST00000558845 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
HMG20A-206ENST00000558845 PTPRGP23470 1445 aa17.47■□□□□ 0.39
HMG20A-206ENST00000558845 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
HMG20A-206ENST00000558845 APLP2Q06481 763 aa17.47■□□□□ 0.39
HMG20A-206ENST00000558845 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
HMG20A-206ENST00000558845 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
HMG20A-206ENST00000558845 CFAP43Q8NDM7 1665 aa17.47■□□□□ 0.39
HMG20A-206ENST00000558845 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
HMG20A-206ENST00000558845 PLB1Q6P1J6 1458 aa17.42■□□□□ 0.38
HMG20A-206ENST00000558845 EPRSP07814 1512 aaKnown RBP17.42■□□□□ 0.38
HMG20A-206ENST00000558845 UACAQ9BZF9 1416 aa17.4■□□□□ 0.38
HMG20A-206ENST00000558845 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
HMG20A-206ENST00000558845 LRRIQ1Q96JM4 1722 aa17.4■□□□□ 0.38
HMG20A-206ENST00000558845 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.37
HMG20A-206ENST00000558845 NPM3O75607 178 aaKnown RBP17.39■□□□□ 0.37
HMG20A-206ENST00000558845 ABCC2Q92887 1545 aa17.37■□□□□ 0.37
HMG20A-206ENST00000558845 SLC24A1O60721 1099 aa17.37■□□□□ 0.37
HMG20A-206ENST00000558845 KANK4Q5T7N3 995 aaPredicted RBP17.34■□□□□ 0.37
HMG20A-206ENST00000558845 EHBP1L1Q8N3D4 1523 aa17.34■□□□□ 0.37
HMG20A-206ENST00000558845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
HMG20A-206ENST00000558845 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
HMG20A-206ENST00000558845 CDK13Q14004 1512 aaKnown RBP17.32■□□□□ 0.36
HMG20A-206ENST00000558845 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
HMG20A-206ENST00000558845 ATP10BO94823 1461 aa17.31■□□□□ 0.36
HMG20A-206ENST00000558845 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
HMG20A-206ENST00000558845 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
HMG20A-206ENST00000558845 TRIM26Q12899 539 aaPredicted RBP17.29■□□□□ 0.36
HMG20A-206ENST00000558845 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
HMG20A-206ENST00000558845 TTBK1Q5TCY1 1321 aaPredicted RBP17.28■□□□□ 0.36
HMG20A-206ENST00000558845 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
HMG20A-206ENST00000558845 TROQ12816 1431 aaPredicted RBP17.26■□□□□ 0.35
HMG20A-206ENST00000558845 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
HMG20A-206ENST00000558845 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
HMG20A-206ENST00000558845 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
HMG20A-206ENST00000558845 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
HMG20A-206ENST00000558845 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
HMG20A-206ENST00000558845 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
HMG20A-206ENST00000558845 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
HMG20A-206ENST00000558845 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
HMG20A-206ENST00000558845 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
HMG20A-206ENST00000558845 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
HMG20A-206ENST00000558845 PHLDB1Q86UU1 1377 aa17.18■□□□□ 0.34
HMG20A-206ENST00000558845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
HMG20A-206ENST00000558845 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
HMG20A-206ENST00000558845 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMG20A-206ENST00000558845 MYOM3Q5VTT5 1437 aa17.15■□□□□ 0.34
HMG20A-206ENST00000558845 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
HMG20A-206ENST00000558845 KIF14Q15058 1648 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms