RNA–Protein interactions for RNA: ENST00000558396.1

EXD1-203, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 4

Gene EXD1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-203ENST00000558396 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
EXD1-203ENST00000558396 TOPBP1Q92547 1522 aa13.99□□□□□ -0.17
EXD1-203ENST00000558396 EIF4G3O43432 1585 aaKnown RBP13.97□□□□□ -0.17
EXD1-203ENST00000558396 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
EXD1-203ENST00000558396 CHD1O14646 1710 aa13.96□□□□□ -0.17
EXD1-203ENST00000558396 CYB5RLQ6IPT4 315 aa13.95□□□□□ -0.18
EXD1-203ENST00000558396 MAP3K1Q13233 1512 aa13.95□□□□□ -0.18
EXD1-203ENST00000558396 GTF3C3Q9Y5Q9 886 aa13.93□□□□□ -0.18
EXD1-203ENST00000558396 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
EXD1-203ENST00000558396 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
EXD1-203ENST00000558396 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
EXD1-203ENST00000558396 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.19
EXD1-203ENST00000558396 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
EXD1-203ENST00000558396 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
EXD1-203ENST00000558396 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
EXD1-203ENST00000558396 FBLN2P98095 1184 aa13.84□□□□□ -0.19
EXD1-203ENST00000558396 RANGAP1P46060 587 aaPredicted RBP13.83□□□□□ -0.2
EXD1-203ENST00000558396 IGF1RP08069 1367 aa13.83□□□□□ -0.2
EXD1-203ENST00000558396 KANK4Q5T7N3 995 aaPredicted RBP13.82□□□□□ -0.2
EXD1-203ENST00000558396 MIER1Q8N108 512 aa13.82□□□□□ -0.2
EXD1-203ENST00000558396 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
EXD1-203ENST00000558396 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
EXD1-203ENST00000558396 TIAM1Q13009 1591 aa13.8□□□□□ -0.2
EXD1-203ENST00000558396 MYT1Q01538 1121 aa13.8□□□□□ -0.2
EXD1-203ENST00000558396 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
EXD1-203ENST00000558396 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
EXD1-203ENST00000558396 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.21
EXD1-203ENST00000558396 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
EXD1-203ENST00000558396 CLASP1Q7Z460 1538 aa13.74□□□□□ -0.21
EXD1-203ENST00000558396 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
EXD1-203ENST00000558396 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
EXD1-203ENST00000558396 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
EXD1-203ENST00000558396 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
EXD1-203ENST00000558396 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
EXD1-203ENST00000558396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
EXD1-203ENST00000558396 YTHDC1Q96MU7 727 aaKnown RBP13.72□□□□□ -0.21
EXD1-203ENST00000558396 SETD5Q9C0A6 1442 aa13.72□□□□□ -0.21
EXD1-203ENST00000558396 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
EXD1-203ENST00000558396 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
EXD1-203ENST00000558396 CUL7Q14999 1698 aa13.69□□□□□ -0.22
EXD1-203ENST00000558396 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
EXD1-203ENST00000558396 CHMP7Q8WUX9 453 aaPredicted RBP13.69□□□□□ -0.22
EXD1-203ENST00000558396 RAB3GAP2Q9H2M9 1393 aa13.69□□□□□ -0.22
EXD1-203ENST00000558396 MAGI1Q96QZ7 1491 aaPredicted RBP13.68□□□□□ -0.22
EXD1-203ENST00000558396 CASKIN1Q8WXD9 1431 aa13.65□□□□□ -0.22
EXD1-203ENST00000558396 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
EXD1-203ENST00000558396 PBRM1Q86U86 1689 aa13.65□□□□□ -0.22
EXD1-203ENST00000558396 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
EXD1-203ENST00000558396 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
EXD1-203ENST00000558396 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
EXD1-203ENST00000558396 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
EXD1-203ENST00000558396 PHLDB1Q86UU1 1377 aa13.61□□□□□ -0.23
EXD1-203ENST00000558396 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
EXD1-203ENST00000558396 CTTNBP2Q8WZ74 1663 aa13.59□□□□□ -0.23
EXD1-203ENST00000558396 ITGAEP38570 1179 aa13.57□□□□□ -0.24
EXD1-203ENST00000558396 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
EXD1-203ENST00000558396 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
EXD1-203ENST00000558396 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
EXD1-203ENST00000558396 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
EXD1-203ENST00000558396 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
EXD1-203ENST00000558396 SAMD9Q5K651 1589 aa13.51□□□□□ -0.25
EXD1-203ENST00000558396 GRIN2AQ12879 1464 aa13.48□□□□□ -0.25
EXD1-203ENST00000558396 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
EXD1-203ENST00000558396 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
EXD1-203ENST00000558396 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
EXD1-203ENST00000558396 CEP170Q5SW79 1584 aa13.47□□□□□ -0.25
EXD1-203ENST00000558396 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
EXD1-203ENST00000558396 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
EXD1-203ENST00000558396 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
EXD1-203ENST00000558396 SUPT16HQ9Y5B9 1047 aaKnown RBP13.46□□□□□ -0.25
EXD1-203ENST00000558396 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
EXD1-203ENST00000558396 ADAMTS12P58397 1594 aa13.45□□□□□ -0.26
EXD1-203ENST00000558396 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
EXD1-203ENST00000558396 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
EXD1-203ENST00000558396 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
EXD1-203ENST00000558396 NUP160Q12769 1436 aa13.45□□□□□ -0.26
EXD1-203ENST00000558396 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
EXD1-203ENST00000558396 MYOM3Q5VTT5 1437 aa13.44□□□□□ -0.26
EXD1-203ENST00000558396 SUPT6HQ7KZ85 1726 aaKnown RBP13.44□□□□□ -0.26
EXD1-203ENST00000558396 PTPN23Q9H3S7 1636 aa13.42□□□□□ -0.26
EXD1-203ENST00000558396 TONSLQ96HA7 1378 aa13.42□□□□□ -0.26
EXD1-203ENST00000558396 AKNAQ7Z591 1439 aa13.41□□□□□ -0.26
EXD1-203ENST00000558396 SIN3AQ96ST3 1273 aa13.41□□□□□ -0.26
EXD1-203ENST00000558396 NCOA2Q15596 1464 aa13.41□□□□□ -0.26
EXD1-203ENST00000558396 UGGT2Q9NYU1 1516 aa13.39□□□□□ -0.27
EXD1-203ENST00000558396 TCOF1Q13428 1488 aaKnown RBP13.39□□□□□ -0.27
EXD1-203ENST00000558396 ANP32CO43423 234 aa13.38□□□□□ -0.27
EXD1-203ENST00000558396 HECW1Q76N89 1606 aa13.38□□□□□ -0.27
EXD1-203ENST00000558396 NAIPQ13075 1403 aa13.38□□□□□ -0.27
EXD1-203ENST00000558396 DDX10Q13206 875 aaKnown RBP13.36□□□□□ -0.27
EXD1-203ENST00000558396 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
EXD1-203ENST00000558396 GCC2Q8IWJ2 1684 aa13.34□□□□□ -0.27
EXD1-203ENST00000558396 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.28
EXD1-203ENST00000558396 PTPRKQ15262 1439 aa13.32□□□□□ -0.28
EXD1-203ENST00000558396 LRRIQ1Q96JM4 1722 aa13.31□□□□□ -0.28
EXD1-203ENST00000558396 NEFLP07196 543 aa13.31□□□□□ -0.28
EXD1-203ENST00000558396 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
EXD1-203ENST00000558396 IQGAP2Q13576 1575 aa13.31□□□□□ -0.28
EXD1-203ENST00000558396 ABCC10Q5T3U5 1492 aa13.29□□□□□ -0.28
EXD1-203ENST00000558396 FAM69CQ0P6D2 419 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms