RNA–Protein interactions for RNA: ENST00000558046.5

IPO4-203, Transcript of importin 4, humanhuman

TSL 2

Gene IPO4, Length 3,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-203ENST00000558046 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
IPO4-203ENST00000558046 CUX1P39880 1505 aa16.88■□□□□ 0.29
IPO4-203ENST00000558046 IGF1RP08069 1367 aa16.87■□□□□ 0.29
IPO4-203ENST00000558046 PHLDB1Q86UU1 1377 aa16.86■□□□□ 0.29
IPO4-203ENST00000558046 SETD5Q9C0A6 1442 aa16.86■□□□□ 0.29
IPO4-203ENST00000558046 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
IPO4-203ENST00000558046 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
IPO4-203ENST00000558046 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
IPO4-203ENST00000558046 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.29
IPO4-203ENST00000558046 RRP7BPQ9NSQ0 103 aa16.83■□□□□ 0.29
IPO4-203ENST00000558046 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
IPO4-203ENST00000558046 HNRNPUQ00839 825 aaKnown RBP eCLIP16.82■□□□□ 0.28
IPO4-203ENST00000558046 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
IPO4-203ENST00000558046 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
IPO4-203ENST00000558046 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
IPO4-203ENST00000558046 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
IPO4-203ENST00000558046 FOXD1Q16676 465 aa16.74■□□□□ 0.27
IPO4-203ENST00000558046 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
IPO4-203ENST00000558046 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
IPO4-203ENST00000558046 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
IPO4-203ENST00000558046 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
IPO4-203ENST00000558046 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
IPO4-203ENST00000558046 CFTRP13569 1480 aa16.69■□□□□ 0.26
IPO4-203ENST00000558046 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
IPO4-203ENST00000558046 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
IPO4-203ENST00000558046 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
IPO4-203ENST00000558046 CADPSQ9ULU8 1353 aa16.68■□□□□ 0.26
IPO4-203ENST00000558046 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
IPO4-203ENST00000558046 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
IPO4-203ENST00000558046 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
IPO4-203ENST00000558046 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
IPO4-203ENST00000558046 ERICH6Q7L0X2 663 aa16.65■□□□□ 0.26
IPO4-203ENST00000558046 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
IPO4-203ENST00000558046 TIAM1Q13009 1591 aa16.6■□□□□ 0.25
IPO4-203ENST00000558046 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
IPO4-203ENST00000558046 CCER2I3L3R5 266 aa16.57■□□□□ 0.24
IPO4-203ENST00000558046 CDK11AQ9UQ88 783 aaPredicted RBP16.57■□□□□ 0.24
IPO4-203ENST00000558046 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
IPO4-203ENST00000558046 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
IPO4-203ENST00000558046 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
IPO4-203ENST00000558046 EIF4G2P78344 907 aaKnown RBP eCLIP16.54■□□□□ 0.24
IPO4-203ENST00000558046 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
IPO4-203ENST00000558046 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
IPO4-203ENST00000558046 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
IPO4-203ENST00000558046 NESP48681 1621 aa16.53■□□□□ 0.24
IPO4-203ENST00000558046 B4GALNT3Q6L9W6 998 aa16.52■□□□□ 0.24
IPO4-203ENST00000558046 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
IPO4-203ENST00000558046 L3MBTL2Q969R5 705 aa16.51■□□□□ 0.23
IPO4-203ENST00000558046 CCDC18Q5T9S5 1454 aa16.5■□□□□ 0.23
IPO4-203ENST00000558046 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
IPO4-203ENST00000558046 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
IPO4-203ENST00000558046 PTPRKQ15262 1439 aa16.48■□□□□ 0.23
IPO4-203ENST00000558046 SALL2Q9Y467 1007 aaPredicted RBP16.48■□□□□ 0.23
IPO4-203ENST00000558046 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
IPO4-203ENST00000558046 FBLN2P98095 1184 aa16.47■□□□□ 0.23
IPO4-203ENST00000558046 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
IPO4-203ENST00000558046 MPHOSPH9Q99550 1183 aa16.46■□□□□ 0.23
IPO4-203ENST00000558046 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
IPO4-203ENST00000558046 FMN1Q68DA7 1419 aa16.42■□□□□ 0.22
IPO4-203ENST00000558046 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■■■■ 27.6
IPO4-203ENST00000558046 ZNF644Q9H582 1327 aaPredicted RBP16.42■□□□□ 0.22
IPO4-203ENST00000558046 CASKIN1Q8WXD9 1431 aa16.41■□□□□ 0.22
IPO4-203ENST00000558046 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
IPO4-203ENST00000558046 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
IPO4-203ENST00000558046 MSH5O43196 834 aa16.38■□□□□ 0.21
IPO4-203ENST00000558046 UACAQ9BZF9 1416 aa16.38■□□□□ 0.21
IPO4-203ENST00000558046 NCOA2Q15596 1464 aa16.37■□□□□ 0.21
IPO4-203ENST00000558046 NAIPQ13075 1403 aa16.36■□□□□ 0.21
IPO4-203ENST00000558046 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
IPO4-203ENST00000558046 BCL11AQ9H165 835 aa16.35■□□□□ 0.21
IPO4-203ENST00000558046 NBR1Q14596 966 aa16.35■□□□□ 0.21
IPO4-203ENST00000558046 FYCO1Q9BQS8 1478 aa16.35■□□□□ 0.21
IPO4-203ENST00000558046 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
IPO4-203ENST00000558046 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
IPO4-203ENST00000558046 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.21
IPO4-203ENST00000558046 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
IPO4-203ENST00000558046 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
IPO4-203ENST00000558046 PPP4R2Q9NY27 417 aa16.31■□□□□ 0.2
IPO4-203ENST00000558046 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
IPO4-203ENST00000558046 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
IPO4-203ENST00000558046 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
IPO4-203ENST00000558046 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
IPO4-203ENST00000558046 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.2
IPO4-203ENST00000558046 CFDP1Q9UEE9 299 aaPredicted RBP16.26■□□□□ 0.19
IPO4-203ENST00000558046 KIF7Q2M1P5 1343 aa16.25■□□□□ 0.19
IPO4-203ENST00000558046 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
IPO4-203ENST00000558046 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
IPO4-203ENST00000558046 PKD2Q13563 968 aa16.23■□□□□ 0.19
IPO4-203ENST00000558046 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
IPO4-203ENST00000558046 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
IPO4-203ENST00000558046 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
IPO4-203ENST00000558046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.18
IPO4-203ENST00000558046 CDK13Q14004 1512 aaKnown RBP16.2■□□□□ 0.18
IPO4-203ENST00000558046 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
IPO4-203ENST00000558046 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
IPO4-203ENST00000558046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.187e-7■■□□□ 14.4
IPO4-203ENST00000558046 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
IPO4-203ENST00000558046 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
IPO4-203ENST00000558046 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
IPO4-203ENST00000558046 CNTLNQ9NXG0 1405 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms