RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
GABRB3-212ENST00000557641 GRIN2BQ13224 1484 aa16.49■□□□□ 0.23
GABRB3-212ENST00000557641 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
GABRB3-212ENST00000557641 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
GABRB3-212ENST00000557641 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
GABRB3-212ENST00000557641 CUL7Q14999 1698 aa16.47■□□□□ 0.23
GABRB3-212ENST00000557641 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
GABRB3-212ENST00000557641 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
GABRB3-212ENST00000557641 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
GABRB3-212ENST00000557641 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
GABRB3-212ENST00000557641 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
GABRB3-212ENST00000557641 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-212ENST00000557641 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
GABRB3-212ENST00000557641 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
GABRB3-212ENST00000557641 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
GABRB3-212ENST00000557641 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
GABRB3-212ENST00000557641 CLIP1P30622 1438 aa16.28■□□□□ 0.2
GABRB3-212ENST00000557641 CHMP7Q8WUX9 453 aaPredicted RBP16.27■□□□□ 0.2
GABRB3-212ENST00000557641 GRIN2AQ12879 1464 aa16.25■□□□□ 0.19
GABRB3-212ENST00000557641 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
GABRB3-212ENST00000557641 KIAA0586Q9BVV6 1533 aa16.19■□□□□ 0.18
GABRB3-212ENST00000557641 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
GABRB3-212ENST00000557641 FBLN2P98095 1184 aa16.19■□□□□ 0.18
GABRB3-212ENST00000557641 NUP160Q12769 1436 aa16.17■□□□□ 0.18
GABRB3-212ENST00000557641 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
GABRB3-212ENST00000557641 IQGAP2Q13576 1575 aa16.14■□□□□ 0.17
GABRB3-212ENST00000557641 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
GABRB3-212ENST00000557641 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
GABRB3-212ENST00000557641 VPS8Q8N3P4 1428 aa16.12■□□□□ 0.17
GABRB3-212ENST00000557641 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
GABRB3-212ENST00000557641 UGGT2Q9NYU1 1516 aa16.09■□□□□ 0.17
GABRB3-212ENST00000557641 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
GABRB3-212ENST00000557641 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
GABRB3-212ENST00000557641 SAMD9Q5K651 1589 aa16.06■□□□□ 0.16
GABRB3-212ENST00000557641 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
GABRB3-212ENST00000557641 CHD1O14646 1710 aa16.04■□□□□ 0.16
GABRB3-212ENST00000557641 FMN1Q68DA7 1419 aa16.03■□□□□ 0.16
GABRB3-212ENST00000557641 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.16
GABRB3-212ENST00000557641 APLP2Q06481 763 aa16.01■□□□□ 0.15
GABRB3-212ENST00000557641 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
GABRB3-212ENST00000557641 P3H3Q8IVL6 736 aa16■□□□□ 0.15
GABRB3-212ENST00000557641 DISP1Q96F81 1524 aa15.99■□□□□ 0.15
GABRB3-212ENST00000557641 KIAA0556O60303 1618 aa15.97■□□□□ 0.15
GABRB3-212ENST00000557641 CASKIN1Q8WXD9 1431 aa15.95■□□□□ 0.14
GABRB3-212ENST00000557641 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
GABRB3-212ENST00000557641 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
GABRB3-212ENST00000557641 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
GABRB3-212ENST00000557641 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
GABRB3-212ENST00000557641 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
GABRB3-212ENST00000557641 MAP3K1Q13233 1512 aa15.93■□□□□ 0.14
GABRB3-212ENST00000557641 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
GABRB3-212ENST00000557641 PTPRGP23470 1445 aa15.85■□□□□ 0.13
GABRB3-212ENST00000557641 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
GABRB3-212ENST00000557641 CCDC18Q5T9S5 1454 aa15.83■□□□□ 0.12
GABRB3-212ENST00000557641 HECW1Q76N89 1606 aa15.83■□□□□ 0.12
GABRB3-212ENST00000557641 TRIM26Q12899 539 aaPredicted RBP15.82■□□□□ 0.12
GABRB3-212ENST00000557641 TIAM1Q13009 1591 aa15.82■□□□□ 0.12
GABRB3-212ENST00000557641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.12
GABRB3-212ENST00000557641 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
GABRB3-212ENST00000557641 PPARGC1BQ86YN6 1023 aaKnown RBP15.78■□□□□ 0.12
GABRB3-212ENST00000557641 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
GABRB3-212ENST00000557641 KANK4Q5T7N3 995 aaPredicted RBP15.77■□□□□ 0.12
GABRB3-212ENST00000557641 EPRSP07814 1512 aaKnown RBP15.77■□□□□ 0.11
GABRB3-212ENST00000557641 CFAP43Q8NDM7 1665 aa15.76■□□□□ 0.11
GABRB3-212ENST00000557641 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
GABRB3-212ENST00000557641 ABCA8O94911 1581 aa15.76■□□□□ 0.11
GABRB3-212ENST00000557641 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
GABRB3-212ENST00000557641 PLB1Q6P1J6 1458 aa15.76■□□□□ 0.11
GABRB3-212ENST00000557641 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
GABRB3-212ENST00000557641 NUP153P49790 1475 aaKnown RBP15.75■□□□□ 0.11
GABRB3-212ENST00000557641 ERCC6L2Q5T890 1561 aa15.74■□□□□ 0.11
GABRB3-212ENST00000557641 MTUS2Q5JR59 1369 aa15.73■□□□□ 0.11
GABRB3-212ENST00000557641 UHRF1BP1LA0JNW5 1464 aa15.71■□□□□ 0.1
GABRB3-212ENST00000557641 EHBP1L1Q8N3D4 1523 aa15.69■□□□□ 0.1
GABRB3-212ENST00000557641 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
GABRB3-212ENST00000557641 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
GABRB3-212ENST00000557641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
GABRB3-212ENST00000557641 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
GABRB3-212ENST00000557641 CDK13Q14004 1512 aaKnown RBP15.67■□□□□ 0.1
GABRB3-212ENST00000557641 ATP10BO94823 1461 aa15.66■□□□□ 0.1
GABRB3-212ENST00000557641 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
GABRB3-212ENST00000557641 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
GABRB3-212ENST00000557641 PLEKHD1A6NEE1 506 aa15.65■□□□□ 0.1
GABRB3-212ENST00000557641 TROQ12816 1431 aaPredicted RBP15.63■□□□□ 0.09
GABRB3-212ENST00000557641 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
GABRB3-212ENST00000557641 ARHGEF11O15085 1522 aa15.62■□□□□ 0.09
GABRB3-212ENST00000557641 KDM5BQ9UGL1 1544 aa15.61■□□□□ 0.09
GABRB3-212ENST00000557641 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
GABRB3-212ENST00000557641 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
GABRB3-212ENST00000557641 MAGI3Q5TCQ9 1506 aa15.6■□□□□ 0.09
GABRB3-212ENST00000557641 NCOA2Q15596 1464 aa15.59■□□□□ 0.09
GABRB3-212ENST00000557641 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
GABRB3-212ENST00000557641 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
GABRB3-212ENST00000557641 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
GABRB3-212ENST00000557641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.08
GABRB3-212ENST00000557641 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
GABRB3-212ENST00000557641 NPM1P06748 294 aaKnown RBP eCLIP15.55■□□□□ 0.08
GABRB3-212ENST00000557641 RNF39Q9H2S5 420 aa15.54■□□□□ 0.08
GABRB3-212ENST00000557641 ADCY10Q96PN6 1610 aa15.54■□□□□ 0.08
GABRB3-212ENST00000557641 MIA2Q96PC5 1412 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms