RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
ATXN3-245ENST00000556958 KCNA4P22459 653 aa11.21□□□□□ -0.61
ATXN3-245ENST00000556958 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
ATXN3-245ENST00000556958 KDM4FA0A1W2PPD8 638 aa11.18□□□□□ -0.62
ATXN3-245ENST00000556958 HAX1O00165 279 aa11.17□□□□□ -0.62
ATXN3-245ENST00000556958 TOPBP1Q92547 1522 aa11.15□□□□□ -0.62
ATXN3-245ENST00000556958 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
ATXN3-245ENST00000556958 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
ATXN3-245ENST00000556958 EIF4G3O43432 1585 aaKnown RBP11.14□□□□□ -0.63
ATXN3-245ENST00000556958 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
ATXN3-245ENST00000556958 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
ATXN3-245ENST00000556958 FBXO41Q8TF61 875 aa11.08□□□□□ -0.64
ATXN3-245ENST00000556958 WIZO95785 1651 aa11.08□□□□□ -0.64
ATXN3-245ENST00000556958 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
ATXN3-245ENST00000556958 CHD1O14646 1710 aa11.07□□□□□ -0.64
ATXN3-245ENST00000556958 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-245ENST00000556958 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
ATXN3-245ENST00000556958 EVX2Q03828 476 aa11.06□□□□□ -0.64
ATXN3-245ENST00000556958 FAM69CQ0P6D2 419 aa11.06□□□□□ -0.64
ATXN3-245ENST00000556958 SOGA1O94964 1423 aa11.05□□□□□ -0.64
ATXN3-245ENST00000556958 SNAPC4Q5SXM2 1469 aa11.05□□□□□ -0.64
ATXN3-245ENST00000556958 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
ATXN3-245ENST00000556958 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
ATXN3-245ENST00000556958 MAGI1Q96QZ7 1491 aaPredicted RBP11.02□□□□□ -0.65
ATXN3-245ENST00000556958 DNMBPQ6XZF7 1577 aa11.02□□□□□ -0.65
ATXN3-245ENST00000556958 SYNJ2O15056 1496 aa11□□□□□ -0.65
ATXN3-245ENST00000556958 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
ATXN3-245ENST00000556958 TARBP1Q13395 1621 aaKnown RBP11□□□□□ -0.65
ATXN3-245ENST00000556958 GRIN2BQ13224 1484 aa10.99□□□□□ -0.65
ATXN3-245ENST00000556958 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
ATXN3-245ENST00000556958 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
ATXN3-245ENST00000556958 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-245ENST00000556958 CCDC88BA6NC98 1476 aa10.94□□□□□ -0.66
ATXN3-245ENST00000556958 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
ATXN3-245ENST00000556958 ATF5Q9Y2D1 282 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-245ENST00000556958 ERCC6L2Q5T890 1561 aa10.9□□□□□ -0.66
ATXN3-245ENST00000556958 LMTK3Q96Q04 1460 aa10.9□□□□□ -0.66
ATXN3-245ENST00000556958 SOCS7O14512 581 aa10.9□□□□□ -0.66
ATXN3-245ENST00000556958 WDR97A6NE52 1622 aa10.9□□□□□ -0.66
ATXN3-245ENST00000556958 KDM6BO15054 1643 aa10.84□□□□□ -0.67
ATXN3-245ENST00000556958 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
ATXN3-245ENST00000556958 ADGRL1O94910 1474 aa10.84□□□□□ -0.67
ATXN3-245ENST00000556958 FGD5Q6ZNL6 1462 aa10.84□□□□□ -0.67
ATXN3-245ENST00000556958 HECW2Q9P2P5 1572 aa10.83□□□□□ -0.68
ATXN3-245ENST00000556958 LHX8Q68G74 356 aa10.82□□□□□ -0.68
ATXN3-245ENST00000556958 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
ATXN3-245ENST00000556958 NUP160Q12769 1436 aa10.81□□□□□ -0.68
ATXN3-245ENST00000556958 PRG4Q92954 1404 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-245ENST00000556958 CEP170Q5SW79 1584 aa10.81□□□□□ -0.68
ATXN3-245ENST00000556958 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
ATXN3-245ENST00000556958 MAPKBP1O60336 1514 aa10.78□□□□□ -0.68
ATXN3-245ENST00000556958 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.68
ATXN3-245ENST00000556958 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
ATXN3-245ENST00000556958 DISP3Q9P2K9 1392 aa10.76□□□□□ -0.69
ATXN3-245ENST00000556958 DIP2BQ9P265 1576 aa10.73□□□□□ -0.69
ATXN3-245ENST00000556958 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
ATXN3-245ENST00000556958 GABBR2O75899 941 aa10.73□□□□□ -0.69
ATXN3-245ENST00000556958 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
ATXN3-245ENST00000556958 FHAD1B1AJZ9 1412 aa10.73□□□□□ -0.69
ATXN3-245ENST00000556958 ABCA10Q8WWZ4 1543 aa10.7□□□□□ -0.7
ATXN3-245ENST00000556958 CUX1P39880 1505 aa10.68□□□□□ -0.7
ATXN3-245ENST00000556958 SHROOM2Q13796 1616 aa10.68□□□□□ -0.7
ATXN3-245ENST00000556958 CERKQ8TCT0 537 aa10.64□□□□□ -0.71
ATXN3-245ENST00000556958 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
ATXN3-245ENST00000556958 WRNQ14191 1432 aaPredicted RBP eCLIP10.64□□□□□ -0.71
ATXN3-245ENST00000556958 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
ATXN3-245ENST00000556958 SLC4A1APQ9BWU0 796 aaKnown RBP10.63□□□□□ -0.71
ATXN3-245ENST00000556958 COL17A1Q9UMD9 1497 aaPredicted RBP10.62□□□□□ -0.71
ATXN3-245ENST00000556958 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
ATXN3-245ENST00000556958 TOP2BQ02880 1626 aa10.62□□□□□ -0.71
ATXN3-245ENST00000556958 PTPRGP23470 1445 aa10.61□□□□□ -0.71
ATXN3-245ENST00000556958 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
ATXN3-245ENST00000556958 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
ATXN3-245ENST00000556958 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
ATXN3-245ENST00000556958 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
ATXN3-245ENST00000556958 ABCA5Q8WWZ7 1642 aa10.6□□□□□ -0.71
ATXN3-245ENST00000556958 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
ATXN3-245ENST00000556958 TEX14Q8IWB6 1497 aa10.6□□□□□ -0.71
ATXN3-245ENST00000556958 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
ATXN3-245ENST00000556958 ADAMTS12P58397 1594 aa10.59□□□□□ -0.71
ATXN3-245ENST00000556958 ADCY10Q96PN6 1610 aa10.58□□□□□ -0.72
ATXN3-245ENST00000556958 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
ATXN3-245ENST00000556958 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
ATXN3-245ENST00000556958 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-245ENST00000556958 TSPOAP1O95153 1857 aa10.56□□□□□ -0.72
ATXN3-245ENST00000556958 GLI2P10070 1586 aa10.56□□□□□ -0.72
ATXN3-245ENST00000556958 ERICH3Q5RHP9 1530 aa10.54□□□□□ -0.72
ATXN3-245ENST00000556958 ABCC2Q92887 1545 aa10.54□□□□□ -0.72
ATXN3-245ENST00000556958 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
ATXN3-245ENST00000556958 KIAA0586Q9BVV6 1533 aa10.52□□□□□ -0.73
ATXN3-245ENST00000556958 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.73
ATXN3-245ENST00000556958 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
ATXN3-245ENST00000556958 PTPRMP28827 1452 aa10.5□□□□□ -0.73
ATXN3-245ENST00000556958 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
ATXN3-245ENST00000556958 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
ATXN3-245ENST00000556958 HSPA2P54652 639 aa10.47□□□□□ -0.73
ATXN3-245ENST00000556958 ARID4BQ4LE39 1312 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-245ENST00000556958 UACAQ9BZF9 1416 aa10.46□□□□□ -0.74
ATXN3-245ENST00000556958 UHRF1BP1LA0JNW5 1464 aa10.46□□□□□ -0.74
ATXN3-245ENST00000556958 CD109Q6YHK3 1445 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms