RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 IGF1RP08069 1367 aa14.95□□□□□ -0.02
PRKCH-222ENST00000556778 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
PRKCH-222ENST00000556778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
PRKCH-222ENST00000556778 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
PRKCH-222ENST00000556778 MAGI1Q96QZ7 1491 aaPredicted RBP14.91□□□□□ -0.02
PRKCH-222ENST00000556778 SYNJ2O15056 1496 aa14.9□□□□□ -0.02
PRKCH-222ENST00000556778 SLC4A2P04920 1241 aa14.88□□□□□ -0.03
PRKCH-222ENST00000556778 FHAD1B1AJZ9 1412 aa14.86□□□□□ -0.03
PRKCH-222ENST00000556778 FAM9AQ8IZU1 332 aaPredicted RBP14.85□□□□□ -0.03
PRKCH-222ENST00000556778 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
PRKCH-222ENST00000556778 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
PRKCH-222ENST00000556778 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
PRKCH-222ENST00000556778 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
PRKCH-222ENST00000556778 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
PRKCH-222ENST00000556778 CHD1O14646 1710 aa14.81□□□□□ -0.04
PRKCH-222ENST00000556778 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
PRKCH-222ENST00000556778 NUP160Q12769 1436 aa14.75□□□□□ -0.05
PRKCH-222ENST00000556778 CEP170Q5SW79 1584 aa14.75□□□□□ -0.05
PRKCH-222ENST00000556778 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
PRKCH-222ENST00000556778 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
PRKCH-222ENST00000556778 CYB5RLQ6IPT4 315 aa14.72□□□□□ -0.05
PRKCH-222ENST00000556778 JPH4Q96JJ6 628 aa14.71□□□□□ -0.05
PRKCH-222ENST00000556778 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
PRKCH-222ENST00000556778 ARHGEF11O15085 1522 aa14.71□□□□□ -0.06
PRKCH-222ENST00000556778 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
PRKCH-222ENST00000556778 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
PRKCH-222ENST00000556778 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
PRKCH-222ENST00000556778 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
PRKCH-222ENST00000556778 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
PRKCH-222ENST00000556778 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
PRKCH-222ENST00000556778 CUL7Q14999 1698 aa14.65□□□□□ -0.06
PRKCH-222ENST00000556778 ERCC6L2Q5T890 1561 aa14.65□□□□□ -0.06
PRKCH-222ENST00000556778 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
PRKCH-222ENST00000556778 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
PRKCH-222ENST00000556778 KIAA0586Q9BVV6 1533 aa14.63□□□□□ -0.07
PRKCH-222ENST00000556778 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
PRKCH-222ENST00000556778 EEA1Q15075 1411 aa14.61□□□□□ -0.07
PRKCH-222ENST00000556778 TTBK1Q5TCY1 1321 aaPredicted RBP14.6□□□□□ -0.07
PRKCH-222ENST00000556778 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
PRKCH-222ENST00000556778 FOXD4L1Q9NU39 408 aa14.57□□□□□ -0.08
PRKCH-222ENST00000556778 ZBTB22O15209 634 aa14.56□□□□□ -0.08
PRKCH-222ENST00000556778 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
PRKCH-222ENST00000556778 P3H3Q8IVL6 736 aa14.53□□□□□ -0.08
PRKCH-222ENST00000556778 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
PRKCH-222ENST00000556778 IQGAP2Q13576 1575 aa14.5□□□□□ -0.09
PRKCH-222ENST00000556778 DISP1Q96F81 1524 aa14.49□□□□□ -0.09
PRKCH-222ENST00000556778 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
PRKCH-222ENST00000556778 PTPRGP23470 1445 aa14.47□□□□□ -0.09
PRKCH-222ENST00000556778 CARMIL2Q6F5E8 1435 aa14.46□□□□□ -0.09
PRKCH-222ENST00000556778 UGGT2Q9NYU1 1516 aa14.46□□□□□ -0.1
PRKCH-222ENST00000556778 LOC105371045A0A1W2PR82 267 aa14.45□□□□□ -0.1
PRKCH-222ENST00000556778 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
PRKCH-222ENST00000556778 KIF21BO75037 1637 aa14.43□□□□□ -0.1
PRKCH-222ENST00000556778 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
PRKCH-222ENST00000556778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.38□□□□□ -0.11
PRKCH-222ENST00000556778 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
PRKCH-222ENST00000556778 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
PRKCH-222ENST00000556778 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
PRKCH-222ENST00000556778 KIAA0556O60303 1618 aa14.37□□□□□ -0.11
PRKCH-222ENST00000556778 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
PRKCH-222ENST00000556778 FHOD3Q2V2M9 1422 aa14.35□□□□□ -0.11
PRKCH-222ENST00000556778 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
PRKCH-222ENST00000556778 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
PRKCH-222ENST00000556778 CTTNBP2Q8WZ74 1663 aa14.35□□□□□ -0.11
PRKCH-222ENST00000556778 UACAQ9BZF9 1416 aa14.34□□□□□ -0.11
PRKCH-222ENST00000556778 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
PRKCH-222ENST00000556778 ADCY10Q96PN6 1610 aa14.31□□□□□ -0.12
PRKCH-222ENST00000556778 ARHGAP35Q9NRY4 1499 aa14.29□□□□□ -0.12
PRKCH-222ENST00000556778 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
PRKCH-222ENST00000556778 CAPN15O75808 1086 aa14.28□□□□□ -0.12
PRKCH-222ENST00000556778 UHRF1BP1LA0JNW5 1464 aa14.27□□□□□ -0.12
PRKCH-222ENST00000556778 APLP2Q06481 763 aa14.27□□□□□ -0.13
PRKCH-222ENST00000556778 ABCC2Q92887 1545 aa14.26□□□□□ -0.13
PRKCH-222ENST00000556778 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
PRKCH-222ENST00000556778 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
PRKCH-222ENST00000556778 ABCA8O94911 1581 aa14.24□□□□□ -0.13
PRKCH-222ENST00000556778 CLIP1P30622 1438 aa14.23□□□□□ -0.13
PRKCH-222ENST00000556778 KDM5BQ9UGL1 1544 aa14.22□□□□□ -0.13
PRKCH-222ENST00000556778 ASXL2Q76L83 1435 aa14.22□□□□□ -0.13
PRKCH-222ENST00000556778 EFCAB5A4FU69 1503 aa14.21□□□□□ -0.13
PRKCH-222ENST00000556778 ATP10BO94823 1461 aa14.21□□□□□ -0.13
PRKCH-222ENST00000556778 KCNH8Q96L42 1107 aa14.21□□□□□ -0.13
PRKCH-222ENST00000556778 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
PRKCH-222ENST00000556778 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
PRKCH-222ENST00000556778 MAPKBP1O60336 1514 aa14.17□□□□□ -0.14
PRKCH-222ENST00000556778 ABCC10Q5T3U5 1492 aa14.17□□□□□ -0.14
PRKCH-222ENST00000556778 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
PRKCH-222ENST00000556778 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
PRKCH-222ENST00000556778 ZCCHC11Q5TAX3 1644 aaKnown RBP14.13□□□□□ -0.15
PRKCH-222ENST00000556778 RAPGEF6Q8TEU7 1601 aa14.13□□□□□ -0.15
PRKCH-222ENST00000556778 DSG3P32926 999 aa14.13□□□□□ -0.15
PRKCH-222ENST00000556778 ATF5Q9Y2D1 282 aaPredicted RBP14.13□□□□□ -0.15
PRKCH-222ENST00000556778 EPRSP07814 1512 aaKnown RBP14.11□□□□□ -0.15
PRKCH-222ENST00000556778 PLEKHD1A6NEE1 506 aa14.11□□□□□ -0.15
PRKCH-222ENST00000556778 WDR7Q9Y4E6 1490 aa14.11□□□□□ -0.15
PRKCH-222ENST00000556778 CDK13Q14004 1512 aaKnown RBP14.1□□□□□ -0.15
PRKCH-222ENST00000556778 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
PRKCH-222ENST00000556778 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.15
PRKCH-222ENST00000556778 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
PRKCH-222ENST00000556778 PCF11O94913 1555 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms