RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
ATXN3-242ENST00000556644 CCDC88BA6NC98 1476 aa8.39□□□□□ -1.07
ATXN3-242ENST00000556644 FGD5Q6ZNL6 1462 aa8.39□□□□□ -1.07
ATXN3-242ENST00000556644 PBRM1Q86U86 1689 aa8.38□□□□□ -1.07
ATXN3-242ENST00000556644 WDR97A6NE52 1622 aa8.38□□□□□ -1.07
ATXN3-242ENST00000556644 MAPKBP1O60336 1514 aa8.38□□□□□ -1.07
ATXN3-242ENST00000556644 NPM1P06748 294 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATXN3-242ENST00000556644 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
ATXN3-242ENST00000556644 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
ATXN3-242ENST00000556644 SHROOM2Q13796 1616 aa8.35□□□□□ -1.07
ATXN3-242ENST00000556644 PRG4Q92954 1404 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-242ENST00000556644 COL17A1Q9UMD9 1497 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-242ENST00000556644 ADCY10Q96PN6 1610 aa8.33□□□□□ -1.08
ATXN3-242ENST00000556644 NUP160Q12769 1436 aa8.33□□□□□ -1.08
ATXN3-242ENST00000556644 PPRC1Q5VV67 1664 aaKnown RBP8.3□□□□□ -1.08
ATXN3-242ENST00000556644 TOP2BQ02880 1626 aa8.29□□□□□ -1.08
ATXN3-242ENST00000556644 CUX1P39880 1505 aa8.29□□□□□ -1.08
ATXN3-242ENST00000556644 ADAMTS12P58397 1594 aa8.28□□□□□ -1.08
ATXN3-242ENST00000556644 ABCA5Q8WWZ7 1642 aa8.28□□□□□ -1.08
ATXN3-242ENST00000556644 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
ATXN3-242ENST00000556644 JPH4Q96JJ6 628 aa8.25□□□□□ -1.09
ATXN3-242ENST00000556644 TTBK1Q5TCY1 1321 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-242ENST00000556644 HSPA2P54652 639 aa8.22□□□□□ -1.09
ATXN3-242ENST00000556644 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
ATXN3-242ENST00000556644 KIF21BO75037 1637 aa8.21□□□□□ -1.09
ATXN3-242ENST00000556644 ABCA10Q8WWZ4 1543 aa8.21□□□□□ -1.1
ATXN3-242ENST00000556644 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
ATXN3-242ENST00000556644 ASXL2Q76L83 1435 aa8.2□□□□□ -1.1
ATXN3-242ENST00000556644 PTPRMP28827 1452 aa8.2□□□□□ -1.1
ATXN3-242ENST00000556644 GLI2P10070 1586 aa8.18□□□□□ -1.1
ATXN3-242ENST00000556644 RUSC2Q8N2Y8 1516 aa8.18□□□□□ -1.1
ATXN3-242ENST00000556644 PLPPR3Q6T4P5 718 aa8.16□□□□□ -1.1
ATXN3-242ENST00000556644 PLB1Q6P1J6 1458 aa8.15□□□□□ -1.1
ATXN3-242ENST00000556644 TEX14Q8IWB6 1497 aa8.15□□□□□ -1.1
ATXN3-242ENST00000556644 MAP3K4Q9Y6R4 1608 aa8.14□□□□□ -1.11
ATXN3-242ENST00000556644 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
ATXN3-242ENST00000556644 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
ATXN3-242ENST00000556644 ADAMTSL3P82987 1691 aa8.12□□□□□ -1.11
ATXN3-242ENST00000556644 CUL7Q14999 1698 aa8.12□□□□□ -1.11
ATXN3-242ENST00000556644 PIAS4Q8N2W9 510 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-242ENST00000556644 PTPRGP23470 1445 aa8.11□□□□□ -1.11
ATXN3-242ENST00000556644 MADDQ8WXG6 1647 aa8.11□□□□□ -1.11
ATXN3-242ENST00000556644 ERICH3Q5RHP9 1530 aa8.08□□□□□ -1.12
ATXN3-242ENST00000556644 ARID4BQ4LE39 1312 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-242ENST00000556644 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
ATXN3-242ENST00000556644 RIMS1Q86UR5 1692 aaKnown RBP8.06□□□□□ -1.12
ATXN3-242ENST00000556644 KIAA0586Q9BVV6 1533 aa8.06□□□□□ -1.12
ATXN3-242ENST00000556644 BCORL1Q5H9F3 1711 aa8.04□□□□□ -1.12
ATXN3-242ENST00000556644 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
ATXN3-242ENST00000556644 ZCCHC11Q5TAX3 1644 aaKnown RBP8.02□□□□□ -1.13
ATXN3-242ENST00000556644 CD109Q6YHK3 1445 aa8.02□□□□□ -1.13
ATXN3-242ENST00000556644 UACAQ9BZF9 1416 aa8.02□□□□□ -1.13
ATXN3-242ENST00000556644 UHRF1BP1LA0JNW5 1464 aa8.01□□□□□ -1.13
ATXN3-242ENST00000556644 WDR7Q9Y4E6 1490 aa8□□□□□ -1.13
ATXN3-242ENST00000556644 MAGI3Q5TCQ9 1506 aa8□□□□□ -1.13
ATXN3-242ENST00000556644 KDM5BQ9UGL1 1544 aa8□□□□□ -1.13
ATXN3-242ENST00000556644 KCNH8Q96L42 1107 aa8□□□□□ -1.13
ATXN3-242ENST00000556644 MED1Q15648 1581 aaPredicted RBP8□□□□□ -1.13
ATXN3-242ENST00000556644 RAPGEF3O95398 923 aa7.98□□□□□ -1.13
ATXN3-242ENST00000556644 CARMIL2Q6F5E8 1435 aa7.97□□□□□ -1.13
ATXN3-242ENST00000556644 YEATS2Q9ULM3 1422 aa7.96□□□□□ -1.13
ATXN3-242ENST00000556644 CFAP43Q8NDM7 1665 aa7.96□□□□□ -1.13
ATXN3-242ENST00000556644 UBAP1LF5GYI3 381 aa7.96□□□□□ -1.14
ATXN3-242ENST00000556644 STRCQ7RTU9 1775 aa7.95□□□□□ -1.14
ATXN3-242ENST00000556644 ARAP3Q8WWN8 1544 aa7.95□□□□□ -1.14
ATXN3-242ENST00000556644 LTBP4Q8N2S1 1624 aa7.95□□□□□ -1.14
ATXN3-242ENST00000556644 MLECQ14165 292 aa7.94□□□□□ -1.14
ATXN3-242ENST00000556644 BIVM-ERCC5R4GMW8 1640 aa7.93□□□□□ -1.14
ATXN3-242ENST00000556644 DMRT2Q9Y5R5 561 aa7.93□□□□□ -1.14
ATXN3-242ENST00000556644 FRMPD1Q5SYB0 1578 aa7.92□□□□□ -1.14
ATXN3-242ENST00000556644 HSPA1LP34931 641 aa7.91□□□□□ -1.14
ATXN3-242ENST00000556644 SCAF1Q9H7N4 1312 aaKnown RBP7.91□□□□□ -1.14
ATXN3-242ENST00000556644 DISP1Q96F81 1524 aa7.91□□□□□ -1.14
ATXN3-242ENST00000556644 PREX1Q8TCU6 1659 aa7.9□□□□□ -1.14
ATXN3-242ENST00000556644 ARHGEF40Q8TER5 1519 aa7.9□□□□□ -1.14
ATXN3-242ENST00000556644 IQSEC2Q5JU85 1478 aa7.9□□□□□ -1.14
ATXN3-242ENST00000556644 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-242ENST00000556644 SIGLEC1Q9BZZ2 1709 aa7.89□□□□□ -1.15
ATXN3-242ENST00000556644 IQGAP2Q13576 1575 aa7.88□□□□□ -1.15
ATXN3-242ENST00000556644 PTPRTO14522 1441 aa7.88□□□□□ -1.15
ATXN3-242ENST00000556644 ARID3CA6NKF2 412 aa7.88□□□□□ -1.15
ATXN3-242ENST00000556644 FER1L4A9Z1Z3 1794 aa7.88□□□□□ -1.15
ATXN3-242ENST00000556644 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
ATXN3-242ENST00000556644 PIP4K2BP78356 416 aa7.87□□□□□ -1.15
ATXN3-242ENST00000556644 FANCAO15360 1455 aa7.87□□□□□ -1.15
ATXN3-242ENST00000556644 POGZQ7Z3K3 1410 aa7.86□□□□□ -1.15
ATXN3-242ENST00000556644 IGF1RP08069 1367 aa7.86□□□□□ -1.15
ATXN3-242ENST00000556644 UHRF1BP1Q6BDS2 1440 aa7.86□□□□□ -1.15
ATXN3-242ENST00000556644 ZNF335Q9H4Z2 1342 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-242ENST00000556644 CACNB1Q02641 598 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-242ENST00000556644 KIAA0556O60303 1618 aa7.84□□□□□ -1.15
ATXN3-242ENST00000556644 AKNAQ7Z591 1439 aa7.83□□□□□ -1.16
ATXN3-242ENST00000556644 PHLDB1Q86UU1 1377 aa7.82□□□□□ -1.16
ATXN3-242ENST00000556644 NEO1Q92859 1461 aa7.81□□□□□ -1.16
ATXN3-242ENST00000556644 ZFYVE16Q7Z3T8 1539 aa7.8□□□□□ -1.16
ATXN3-242ENST00000556644 RGS17Q9UGC6 210 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-242ENST00000556644 ABCA9Q8IUA7 1624 aa7.8□□□□□ -1.16
ATXN3-242ENST00000556644 CARMIL1Q5VZK9 1371 aa7.8□□□□□ -1.16
ATXN3-242ENST00000556644 NCOA1Q15788 1441 aa7.79□□□□□ -1.16
ATXN3-242ENST00000556644 UGGT2Q9NYU1 1516 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms