RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
NRXN3-213ENST00000556496 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
NRXN3-213ENST00000556496 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
NRXN3-213ENST00000556496 ITGAEP38570 1179 aa15.65■□□□□ 0.1
NRXN3-213ENST00000556496 LRRC9Q6ZRR7 1453 aa15.64■□□□□ 0.09
NRXN3-213ENST00000556496 WDR97A6NE52 1622 aa15.64■□□□□ 0.09
NRXN3-213ENST00000556496 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
NRXN3-213ENST00000556496 CLSPNQ9HAW4 1339 aa15.63■□□□□ 0.09
NRXN3-213ENST00000556496 EFCAB5A4FU69 1503 aa15.62■□□□□ 0.09
NRXN3-213ENST00000556496 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
NRXN3-213ENST00000556496 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
NRXN3-213ENST00000556496 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
NRXN3-213ENST00000556496 PHLDB1Q86UU1 1377 aa15.59■□□□□ 0.09
NRXN3-213ENST00000556496 CTTNBP2Q8WZ74 1663 aa15.58■□□□□ 0.08
NRXN3-213ENST00000556496 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
NRXN3-213ENST00000556496 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
NRXN3-213ENST00000556496 CFAP43Q8NDM7 1665 aa15.56■□□□□ 0.08
NRXN3-213ENST00000556496 AQRO60306 1485 aaKnown RBP eCLIP15.56■□□□□ 0.08
NRXN3-213ENST00000556496 FMN1Q68DA7 1419 aa15.55■□□□□ 0.08
NRXN3-213ENST00000556496 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
NRXN3-213ENST00000556496 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
NRXN3-213ENST00000556496 RAB3GAP2Q9H2M9 1393 aa15.52■□□□□ 0.07
NRXN3-213ENST00000556496 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
NRXN3-213ENST00000556496 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
NRXN3-213ENST00000556496 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
NRXN3-213ENST00000556496 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
NRXN3-213ENST00000556496 SAMD9Q5K651 1589 aa15.48■□□□□ 0.07
NRXN3-213ENST00000556496 MTUS2Q5JR59 1369 aa15.45■□□□□ 0.06
NRXN3-213ENST00000556496 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
NRXN3-213ENST00000556496 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
NRXN3-213ENST00000556496 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
NRXN3-213ENST00000556496 MIER1Q8N108 512 aa15.42■□□□□ 0.06
NRXN3-213ENST00000556496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.41■□□□□ 0.06
NRXN3-213ENST00000556496 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
NRXN3-213ENST00000556496 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
NRXN3-213ENST00000556496 FGD6Q6ZV73 1430 aa15.4■□□□□ 0.06
NRXN3-213ENST00000556496 MAPKBP1O60336 1514 aa15.39■□□□□ 0.05
NRXN3-213ENST00000556496 ADAMTS12P58397 1594 aa15.39■□□□□ 0.05
NRXN3-213ENST00000556496 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
NRXN3-213ENST00000556496 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
NRXN3-213ENST00000556496 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
NRXN3-213ENST00000556496 IQGAP2Q13576 1575 aa15.36■□□□□ 0.05
NRXN3-213ENST00000556496 WDR62O43379 1518 aa15.35■□□□□ 0.05
NRXN3-213ENST00000556496 NCOA2Q15596 1464 aa15.35■□□□□ 0.05
NRXN3-213ENST00000556496 LRRIQ1Q96JM4 1722 aa15.35■□□□□ 0.05
NRXN3-213ENST00000556496 YTHDC1Q96MU7 727 aaKnown RBP15.33■□□□□ 0.05
NRXN3-213ENST00000556496 MYOM3Q5VTT5 1437 aa15.33■□□□□ 0.04
NRXN3-213ENST00000556496 EHBP1L1Q8N3D4 1523 aa15.32■□□□□ 0.04
NRXN3-213ENST00000556496 SIN3AQ96ST3 1273 aa15.31■□□□□ 0.04
NRXN3-213ENST00000556496 CCDC18Q5T9S5 1454 aa15.31■□□□□ 0.04
NRXN3-213ENST00000556496 ERCC6Q03468 1493 aa15.3■□□□□ 0.04
NRXN3-213ENST00000556496 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
NRXN3-213ENST00000556496 SUPT6HQ7KZ85 1726 aaKnown RBP15.29■□□□□ 0.04
NRXN3-213ENST00000556496 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
NRXN3-213ENST00000556496 HECW1Q76N89 1606 aa15.28■□□□□ 0.04
NRXN3-213ENST00000556496 ARID3CA6NKF2 412 aa15.27■□□□□ 0.04
NRXN3-213ENST00000556496 EPRSP07814 1512 aaKnown RBP15.27■□□□□ 0.04
NRXN3-213ENST00000556496 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.04
NRXN3-213ENST00000556496 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
NRXN3-213ENST00000556496 KIAA0586Q9BVV6 1533 aa15.26■□□□□ 0.03
NRXN3-213ENST00000556496 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
NRXN3-213ENST00000556496 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
NRXN3-213ENST00000556496 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
NRXN3-213ENST00000556496 CDK13Q14004 1512 aaKnown RBP15.24■□□□□ 0.03
NRXN3-213ENST00000556496 GRIN2AQ12879 1464 aa15.23■□□□□ 0.03
NRXN3-213ENST00000556496 TIMELESSQ9UNS1 1208 aa15.23■□□□□ 0.03
NRXN3-213ENST00000556496 PTPN23Q9H3S7 1636 aa15.22■□□□□ 0.03
NRXN3-213ENST00000556496 NAIPQ13075 1403 aa15.22■□□□□ 0.03
NRXN3-213ENST00000556496 DISP1Q96F81 1524 aa15.21■□□□□ 0.03
NRXN3-213ENST00000556496 UACAQ9BZF9 1416 aa15.2■□□□□ 0.02
NRXN3-213ENST00000556496 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
NRXN3-213ENST00000556496 KIAA0556O60303 1618 aa15.19■□□□□ 0.02
NRXN3-213ENST00000556496 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
NRXN3-213ENST00000556496 TCOF1Q13428 1488 aaKnown RBP15.18■□□□□ 0.02
NRXN3-213ENST00000556496 FBLN2P98095 1184 aa15.18■□□□□ 0.02
NRXN3-213ENST00000556496 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
NRXN3-213ENST00000556496 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
NRXN3-213ENST00000556496 PPP1R15AO75807 674 aaPredicted RBP15.16■□□□□ 0.02
NRXN3-213ENST00000556496 MIA2Q96PC5 1412 aa15.16■□□□□ 0.02
NRXN3-213ENST00000556496 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
NRXN3-213ENST00000556496 NUP153P49790 1475 aaKnown RBP15.14■□□□□ 0.01
NRXN3-213ENST00000556496 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
NRXN3-213ENST00000556496 CDK11AQ9UQ88 783 aaPredicted RBP15.13■□□□□ 0.01
NRXN3-213ENST00000556496 CEP170Q5SW79 1584 aa15.11■□□□□ 0.01
NRXN3-213ENST00000556496 RAPGEF6Q8TEU7 1601 aa15.11■□□□□ 0.01
NRXN3-213ENST00000556496 AKNAQ7Z591 1439 aa15.1■□□□□ 0.01
NRXN3-213ENST00000556496 TRIM52Q96A61 297 aa15.09■□□□□ 0.01
NRXN3-213ENST00000556496 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
NRXN3-213ENST00000556496 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
NRXN3-213ENST00000556496 HIRIP3Q9BW71 556 aaPredicted RBP15.07■□□□□ 0
NRXN3-213ENST00000556496 PLB1Q6P1J6 1458 aa15.07■□□□□ 0
NRXN3-213ENST00000556496 NUP160Q12769 1436 aa15.07■□□□□ 0
NRXN3-213ENST00000556496 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
NRXN3-213ENST00000556496 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
NRXN3-213ENST00000556496 GCC2Q8IWJ2 1684 aa15.05■□□□□ 0
NRXN3-213ENST00000556496 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
NRXN3-213ENST00000556496 DAPK1P53355 1430 aa15.04■□□□□ -0
NRXN3-213ENST00000556496 TROQ12816 1431 aaPredicted RBP15.04■□□□□ -0
NRXN3-213ENST00000556496 KDM6BO15054 1643 aa15.03■□□□□ -0
NRXN3-213ENST00000556496 ABCC5O15440 1437 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms