RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 PDS5BQ9NTI5 1447 aa17.19■□□□□ 0.34
PRKCH-221ENST00000556245 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
PRKCH-221ENST00000556245 CFAP43Q8NDM7 1665 aa17.18■□□□□ 0.34
PRKCH-221ENST00000556245 CTTNBP2Q8WZ74 1663 aa17.18■□□□□ 0.34
PRKCH-221ENST00000556245 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
PRKCH-221ENST00000556245 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
PRKCH-221ENST00000556245 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
PRKCH-221ENST00000556245 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
PRKCH-221ENST00000556245 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
PRKCH-221ENST00000556245 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
PRKCH-221ENST00000556245 P3H3Q8IVL6 736 aa17.13■□□□□ 0.33
PRKCH-221ENST00000556245 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRKCH-221ENST00000556245 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
PRKCH-221ENST00000556245 CASKIN1Q8WXD9 1431 aa17.11■□□□□ 0.33
PRKCH-221ENST00000556245 ITGAEP38570 1179 aa17.11■□□□□ 0.33
PRKCH-221ENST00000556245 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
PRKCH-221ENST00000556245 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
PRKCH-221ENST00000556245 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
PRKCH-221ENST00000556245 NEUROD1Q13562 356 aa17.08■□□□□ 0.33
PRKCH-221ENST00000556245 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.32
PRKCH-221ENST00000556245 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
PRKCH-221ENST00000556245 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
PRKCH-221ENST00000556245 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
PRKCH-221ENST00000556245 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
PRKCH-221ENST00000556245 SAMD9Q5K651 1589 aa17.02■□□□□ 0.31
PRKCH-221ENST00000556245 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.31
PRKCH-221ENST00000556245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRKCH-221ENST00000556245 MIER1Q8N108 512 aa17■□□□□ 0.31
PRKCH-221ENST00000556245 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
PRKCH-221ENST00000556245 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
PRKCH-221ENST00000556245 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
PRKCH-221ENST00000556245 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
PRKCH-221ENST00000556245 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
PRKCH-221ENST00000556245 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
PRKCH-221ENST00000556245 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
PRKCH-221ENST00000556245 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
PRKCH-221ENST00000556245 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
PRKCH-221ENST00000556245 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
PRKCH-221ENST00000556245 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
PRKCH-221ENST00000556245 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
PRKCH-221ENST00000556245 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
PRKCH-221ENST00000556245 EHBP1L1Q8N3D4 1523 aa16.87■□□□□ 0.29
PRKCH-221ENST00000556245 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
PRKCH-221ENST00000556245 SUPT6HQ7KZ85 1726 aaKnown RBP16.86■□□□□ 0.29
PRKCH-221ENST00000556245 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
PRKCH-221ENST00000556245 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
PRKCH-221ENST00000556245 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
PRKCH-221ENST00000556245 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
PRKCH-221ENST00000556245 MYOM3Q5VTT5 1437 aa16.84■□□□□ 0.29
PRKCH-221ENST00000556245 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
PRKCH-221ENST00000556245 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
PRKCH-221ENST00000556245 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
PRKCH-221ENST00000556245 HFM1A2PYH4 1435 aa16.8■□□□□ 0.28
PRKCH-221ENST00000556245 UGGT2Q9NYU1 1516 aa16.79■□□□□ 0.28
PRKCH-221ENST00000556245 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
PRKCH-221ENST00000556245 ARHGEF11O15085 1522 aa16.78■□□□□ 0.28
PRKCH-221ENST00000556245 WDR62O43379 1518 aa16.78■□□□□ 0.28
PRKCH-221ENST00000556245 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
PRKCH-221ENST00000556245 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
PRKCH-221ENST00000556245 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
PRKCH-221ENST00000556245 MAGI3Q5TCQ9 1506 aa16.74■□□□□ 0.27
PRKCH-221ENST00000556245 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
PRKCH-221ENST00000556245 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
PRKCH-221ENST00000556245 NAIPQ13075 1403 aa16.72■□□□□ 0.27
PRKCH-221ENST00000556245 TCOF1Q13428 1488 aaKnown RBP16.72■□□□□ 0.27
PRKCH-221ENST00000556245 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
PRKCH-221ENST00000556245 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
PRKCH-221ENST00000556245 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
PRKCH-221ENST00000556245 CDK13Q14004 1512 aaKnown RBP16.67■□□□□ 0.26
PRKCH-221ENST00000556245 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
PRKCH-221ENST00000556245 KIAA0556O60303 1618 aa16.66■□□□□ 0.26
PRKCH-221ENST00000556245 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
PRKCH-221ENST00000556245 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
PRKCH-221ENST00000556245 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
PRKCH-221ENST00000556245 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
PRKCH-221ENST00000556245 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
PRKCH-221ENST00000556245 DISP1Q96F81 1524 aa16.63■□□□□ 0.25
PRKCH-221ENST00000556245 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-221ENST00000556245 RAPGEF6Q8TEU7 1601 aa16.59■□□□□ 0.25
PRKCH-221ENST00000556245 RRP7BPQ9NSQ0 103 aa16.59■□□□□ 0.25
PRKCH-221ENST00000556245 CHIC2Q9UKJ5 165 aa16.58■□□□□ 0.25
PRKCH-221ENST00000556245 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.25
PRKCH-221ENST00000556245 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
PRKCH-221ENST00000556245 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
PRKCH-221ENST00000556245 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
PRKCH-221ENST00000556245 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
PRKCH-221ENST00000556245 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
PRKCH-221ENST00000556245 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
PRKCH-221ENST00000556245 ROCK1Q13464 1354 aa16.53■□□□□ 0.24
PRKCH-221ENST00000556245 CEP170Q5SW79 1584 aa16.52■□□□□ 0.23
PRKCH-221ENST00000556245 DAPK1P53355 1430 aa16.52■□□□□ 0.23
PRKCH-221ENST00000556245 DNMT1P26358 1616 aaKnown RBP16.51■□□□□ 0.23
PRKCH-221ENST00000556245 CARMIL2Q6F5E8 1435 aa16.5■□□□□ 0.23
PRKCH-221ENST00000556245 KDM6BO15054 1643 aa16.5■□□□□ 0.23
PRKCH-221ENST00000556245 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
PRKCH-221ENST00000556245 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
PRKCH-221ENST00000556245 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-221ENST00000556245 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
PRKCH-221ENST00000556245 ABCC5O15440 1437 aa16.48■□□□□ 0.23
PRKCH-221ENST00000556245 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms