RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
SRSF5-212ENST00000556184 CLIP1P30622 1438 aa15.35■□□□□ 0.05
SRSF5-212ENST00000556184 DHX57Q6P158 1386 aaKnown RBP15.29■□□□□ 0.04
SRSF5-212ENST00000556184 APLP2Q06481 763 aa15.29■□□□□ 0.04
SRSF5-212ENST00000556184 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
SRSF5-212ENST00000556184 CUX2O14529 1486 aa15.23■□□□□ 0.03
SRSF5-212ENST00000556184 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
SRSF5-212ENST00000556184 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
SRSF5-212ENST00000556184 ARXQ96QS3 562 aa15.18■□□□□ 0.02
SRSF5-212ENST00000556184 VSIG10Q8N0Z9 540 aa15.17■□□□□ 0.02
SRSF5-212ENST00000556184 BCL11AQ9H165 835 aa15.17■□□□□ 0.02
SRSF5-212ENST00000556184 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
SRSF5-212ENST00000556184 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
SRSF5-212ENST00000556184 RAPGEF2Q9Y4G8 1499 aa15.13■□□□□ 0.01
SRSF5-212ENST00000556184 SYNJ1O43426 1573 aa15.12■□□□□ 0.01
SRSF5-212ENST00000556184 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
SRSF5-212ENST00000556184 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
SRSF5-212ENST00000556184 PRXQ9BXM0 1461 aa15.03■□□□□ -0
SRSF5-212ENST00000556184 ARAP1Q96P48 1450 aa15.03■□□□□ -0
SRSF5-212ENST00000556184 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
SRSF5-212ENST00000556184 CCNB3Q8WWL7 1395 aa15.01□□□□□ -0.01
SRSF5-212ENST00000556184 CCER2I3L3R5 266 aa15.01□□□□□ -0.01
SRSF5-212ENST00000556184 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
SRSF5-212ENST00000556184 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
SRSF5-212ENST00000556184 NEFLP07196 543 aa14.97□□□□□ -0.01
SRSF5-212ENST00000556184 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
SRSF5-212ENST00000556184 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
SRSF5-212ENST00000556184 NESP48681 1621 aa14.95□□□□□ -0.02
SRSF5-212ENST00000556184 PPP1R15AO75807 674 aaPredicted RBP14.94□□□□□ -0.02
SRSF5-212ENST00000556184 PKD2Q13563 968 aa14.94□□□□□ -0.02
SRSF5-212ENST00000556184 KCNH8Q96L42 1107 aa14.94□□□□□ -0.02
SRSF5-212ENST00000556184 MAPKBP1O60336 1514 aa14.94□□□□□ -0.02
SRSF5-212ENST00000556184 MAP3K1Q13233 1512 aa14.94□□□□□ -0.02
SRSF5-212ENST00000556184 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
SRSF5-212ENST00000556184 MYT1LQ9UL68 1186 aa14.91□□□□□ -0.02
SRSF5-212ENST00000556184 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
SRSF5-212ENST00000556184 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
SRSF5-212ENST00000556184 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
SRSF5-212ENST00000556184 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
SRSF5-212ENST00000556184 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
SRSF5-212ENST00000556184 ERICH6BQ5W0A0 696 aa14.87□□□□□ -0.03
SRSF5-212ENST00000556184 PAXIP1Q6ZW49 1069 aaPredicted RBP14.86□□□□□ -0.03
SRSF5-212ENST00000556184 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
SRSF5-212ENST00000556184 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
SRSF5-212ENST00000556184 DDX10Q13206 875 aaKnown RBP14.85□□□□□ -0.03
SRSF5-212ENST00000556184 MYCNP04198 464 aaPredicted RBP14.84□□□□□ -0.03
SRSF5-212ENST00000556184 HOMEZQ8IX15 550 aa14.84□□□□□ -0.03
SRSF5-212ENST00000556184 ANP32CO43423 234 aa14.83□□□□□ -0.04
SRSF5-212ENST00000556184 IFNLR1Q8IU57 520 aaPredicted RBP14.83□□□□□ -0.04
SRSF5-212ENST00000556184 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
SRSF5-212ENST00000556184 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
SRSF5-212ENST00000556184 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
SRSF5-212ENST00000556184 KIF27Q86VH2 1401 aa14.81□□□□□ -0.04
SRSF5-212ENST00000556184 MSH5O43196 834 aa14.81□□□□□ -0.04
SRSF5-212ENST00000556184 ERCC6Q03468 1493 aa14.78□□□□□ -0.04
SRSF5-212ENST00000556184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.78□□□□□ -0.04
SRSF5-212ENST00000556184 TMEM132AQ24JP5 1023 aa14.77□□□□□ -0.04
SRSF5-212ENST00000556184 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
SRSF5-212ENST00000556184 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
SRSF5-212ENST00000556184 CFTRP13569 1480 aa14.75□□□□□ -0.05
SRSF5-212ENST00000556184 TIAM1Q13009 1591 aa14.75□□□□□ -0.05
SRSF5-212ENST00000556184 LRRC9Q6ZRR7 1453 aa14.73□□□□□ -0.05
SRSF5-212ENST00000556184 CUX1P39880 1505 aa14.72□□□□□ -0.05
SRSF5-212ENST00000556184 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
SRSF5-212ENST00000556184 SIN3AQ96ST3 1273 aa14.7□□□□□ -0.06
SRSF5-212ENST00000556184 VASPP50552 380 aaPredicted RBP14.7□□□□□ -0.06
SRSF5-212ENST00000556184 ITGAEP38570 1179 aa14.69□□□□□ -0.06
SRSF5-212ENST00000556184 ERICH6Q7L0X2 663 aa14.67□□□□□ -0.06
SRSF5-212ENST00000556184 PHLDB1Q86UU1 1377 aa14.67□□□□□ -0.06
SRSF5-212ENST00000556184 FHAD1B1AJZ9 1412 aa14.66□□□□□ -0.06
SRSF5-212ENST00000556184 PPP4R2Q9NY27 417 aa14.65□□□□□ -0.06
SRSF5-212ENST00000556184 PODXL2Q9NZ53 605 aa14.65□□□□□ -0.06
SRSF5-212ENST00000556184 PDS5BQ9NTI5 1447 aa14.64□□□□□ -0.07
SRSF5-212ENST00000556184 LAMC3Q9Y6N6 1575 aa14.63□□□□□ -0.07
SRSF5-212ENST00000556184 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
SRSF5-212ENST00000556184 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
SRSF5-212ENST00000556184 IGF1RP08069 1367 aa14.61□□□□□ -0.07
SRSF5-212ENST00000556184 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
SRSF5-212ENST00000556184 TONSLQ96HA7 1378 aa14.59□□□□□ -0.07
SRSF5-212ENST00000556184 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.07
SRSF5-212ENST00000556184 CFAP43Q8NDM7 1665 aa14.58□□□□□ -0.08
SRSF5-212ENST00000556184 HNRNPUQ00839 825 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRSF5-212ENST00000556184 BBXQ8WY36 941 aaPredicted RBP14.57□□□□□ -0.08
SRSF5-212ENST00000556184 UACAQ9BZF9 1416 aa14.56□□□□□ -0.08
SRSF5-212ENST00000556184 FAM50AQ14320 339 aaKnown RBP14.56□□□□□ -0.08
SRSF5-212ENST00000556184 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.083e-8■■■■□ 24.7
SRSF5-212ENST00000556184 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
SRSF5-212ENST00000556184 HFM1A2PYH4 1435 aa14.54□□□□□ -0.08
SRSF5-212ENST00000556184 DEKP35659 375 aaKnown RBP14.53□□□□□ -0.08
SRSF5-212ENST00000556184 CARMIL1Q5VZK9 1371 aa14.53□□□□□ -0.08
SRSF5-212ENST00000556184 HIRIP3Q9BW71 556 aaPredicted RBP14.52□□□□□ -0.08
SRSF5-212ENST00000556184 FYCO1Q9BQS8 1478 aa14.52□□□□□ -0.09
SRSF5-212ENST00000556184 FGD5Q6ZNL6 1462 aa14.51□□□□□ -0.09
SRSF5-212ENST00000556184 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
SRSF5-212ENST00000556184 NBR1Q14596 966 aa14.5□□□□□ -0.09
SRSF5-212ENST00000556184 CASKIN1Q8WXD9 1431 aa14.5□□□□□ -0.09
SRSF5-212ENST00000556184 KDM5BQ9UGL1 1544 aa14.49□□□□□ -0.09
SRSF5-212ENST00000556184 NOP58Q9Y2X3 529 aaKnown RBP14.49□□□□□ -0.09
SRSF5-212ENST00000556184 ZBED9Q6R2W3 1325 aa14.48□□□□□ -0.09
SRSF5-212ENST00000556184 CCDC18Q5T9S5 1454 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms