RNA–Protein interactions for RNA: ENST00000556095.5

GSKIP-207, Transcript of GSK3B interacting protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GSKIP, Length 3,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-207ENST00000556095 CADPSQ9ULU8 1353 aa24.24■■□□□ 1.47
GSKIP-207ENST00000556095 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
GSKIP-207ENST00000556095 FAM9BQ8IZU0 186 aa24.21■■□□□ 1.47
GSKIP-207ENST00000556095 DHX57Q6P158 1386 aaKnown RBP24.21■■□□□ 1.47
GSKIP-207ENST00000556095 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
GSKIP-207ENST00000556095 FOXD1Q16676 465 aa24.2■■□□□ 1.46
GSKIP-207ENST00000556095 KIF21BO75037 1637 aa24.17■■□□□ 1.46
GSKIP-207ENST00000556095 IGF1RP08069 1367 aa24.17■■□□□ 1.46
GSKIP-207ENST00000556095 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
GSKIP-207ENST00000556095 ARAP1Q96P48 1450 aa24.11■■□□□ 1.45
GSKIP-207ENST00000556095 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
GSKIP-207ENST00000556095 CDK11AQ9UQ88 783 aaPredicted RBP24.1■■□□□ 1.45
GSKIP-207ENST00000556095 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
GSKIP-207ENST00000556095 CLSPNQ9HAW4 1339 aa24.08■■□□□ 1.45
GSKIP-207ENST00000556095 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.44
GSKIP-207ENST00000556095 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.44
GSKIP-207ENST00000556095 SETD5Q9C0A6 1442 aa24.07■■□□□ 1.44
GSKIP-207ENST00000556095 SALL2Q9Y467 1007 aaPredicted RBP24.07■■□□□ 1.44
GSKIP-207ENST00000556095 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
GSKIP-207ENST00000556095 UNC13AQ9UPW8 1703 aa24.05■■□□□ 1.44
GSKIP-207ENST00000556095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.04■■□□□ 1.44
GSKIP-207ENST00000556095 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
GSKIP-207ENST00000556095 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
GSKIP-207ENST00000556095 FGD5Q6ZNL6 1462 aa24■■□□□ 1.43
GSKIP-207ENST00000556095 SUPT16HQ9Y5B9 1047 aaKnown RBP24■■□□□ 1.43
GSKIP-207ENST00000556095 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
GSKIP-207ENST00000556095 CUX1P39880 1505 aa23.96■■□□□ 1.43
GSKIP-207ENST00000556095 EIF4G2P78344 907 aaKnown RBP eCLIP23.95■■□□□ 1.42
GSKIP-207ENST00000556095 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.42
GSKIP-207ENST00000556095 MRS2Q9HD23 443 aa23.94■■□□□ 1.42
GSKIP-207ENST00000556095 PRXQ9BXM0 1461 aa23.92■■□□□ 1.42
GSKIP-207ENST00000556095 NESP48681 1621 aa23.92■■□□□ 1.42
GSKIP-207ENST00000556095 CFDP1Q9UEE9 299 aaPredicted RBP23.92■■□□□ 1.42
GSKIP-207ENST00000556095 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
GSKIP-207ENST00000556095 PPP1R15AO75807 674 aaPredicted RBP23.91■■□□□ 1.42
GSKIP-207ENST00000556095 RGL3Q3MIN7 710 aa23.89■■□□□ 1.41
GSKIP-207ENST00000556095 CFTRP13569 1480 aa23.88■■□□□ 1.41
GSKIP-207ENST00000556095 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
GSKIP-207ENST00000556095 TSPY4P0CV99 314 aa23.84■■□□□ 1.41
GSKIP-207ENST00000556095 TSPY10P0CW01 314 aa23.84■■□□□ 1.41
GSKIP-207ENST00000556095 HSPA5P11021 654 aaKnown RBP23.8■■□□□ 1.4
GSKIP-207ENST00000556095 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
GSKIP-207ENST00000556095 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
GSKIP-207ENST00000556095 MPHOSPH9Q99550 1183 aa23.74■■□□□ 1.39
GSKIP-207ENST00000556095 FMN1Q68DA7 1419 aa23.73■■□□□ 1.39
GSKIP-207ENST00000556095 L3MBTL2Q969R5 705 aa23.73■■□□□ 1.39
GSKIP-207ENST00000556095 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
GSKIP-207ENST00000556095 TMC1Q8TDI8 760 aa23.71■■□□□ 1.39
GSKIP-207ENST00000556095 ZNF644Q9H582 1327 aaPredicted RBP23.71■■□□□ 1.39
GSKIP-207ENST00000556095 LRRC9Q6ZRR7 1453 aa23.68■■□□□ 1.38
GSKIP-207ENST00000556095 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
GSKIP-207ENST00000556095 MYT1Q01538 1121 aa23.65■■□□□ 1.38
GSKIP-207ENST00000556095 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
GSKIP-207ENST00000556095 RRBP1Q9P2E9 1410 aaKnown RBP23.64■■□□□ 1.38
GSKIP-207ENST00000556095 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.37
GSKIP-207ENST00000556095 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.37
GSKIP-207ENST00000556095 CHGAP10645 457 aaKnown RBP23.63■■□□□ 1.37
GSKIP-207ENST00000556095 PKD2Q13563 968 aa23.62■■□□□ 1.37
GSKIP-207ENST00000556095 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
GSKIP-207ENST00000556095 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
GSKIP-207ENST00000556095 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
GSKIP-207ENST00000556095 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
GSKIP-207ENST00000556095 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
GSKIP-207ENST00000556095 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
GSKIP-207ENST00000556095 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
GSKIP-207ENST00000556095 NPM2Q86SE8 214 aaKnown RBP23.54■■□□□ 1.36
GSKIP-207ENST00000556095 B4GALNT3Q6L9W6 998 aa23.53■■□□□ 1.36
GSKIP-207ENST00000556095 FGD6Q6ZV73 1430 aa23.53■■□□□ 1.36
GSKIP-207ENST00000556095 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.368e-7■■■■□ 26.4
GSKIP-207ENST00000556095 CCDC18Q5T9S5 1454 aa23.51■■□□□ 1.35
GSKIP-207ENST00000556095 TSHZ2Q9NRE2 1034 aa23.49■■□□□ 1.35
GSKIP-207ENST00000556095 JPH4Q96JJ6 628 aa23.49■■□□□ 1.35
GSKIP-207ENST00000556095 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
GSKIP-207ENST00000556095 CCER2I3L3R5 266 aa23.48■■□□□ 1.35
GSKIP-207ENST00000556095 CCDC136Q96JN2 1154 aa23.48■■□□□ 1.35
GSKIP-207ENST00000556095 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
GSKIP-207ENST00000556095 CASKIN1Q8WXD9 1431 aa23.41■■□□□ 1.34
GSKIP-207ENST00000556095 TIAM1Q13009 1591 aa23.41■■□□□ 1.34
GSKIP-207ENST00000556095 NUP155O75694 1391 aa23.4■■□□□ 1.34
GSKIP-207ENST00000556095 NCOA2Q15596 1464 aa23.39■■□□□ 1.34
GSKIP-207ENST00000556095 WDR97A6NE52 1622 aa23.39■■□□□ 1.33
GSKIP-207ENST00000556095 BCL11AQ9H165 835 aa23.39■■□□□ 1.33
GSKIP-207ENST00000556095 MYOM3Q5VTT5 1437 aa23.36■■□□□ 1.33
GSKIP-207ENST00000556095 DAXXQ9UER7 740 aaPredicted RBP23.35■■□□□ 1.33
GSKIP-207ENST00000556095 RBM19Q9Y4C8 960 aaKnown RBP23.34■■□□□ 1.33
GSKIP-207ENST00000556095 CCDC184Q52MB2 194 aa23.33■■□□□ 1.33
GSKIP-207ENST00000556095 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.32
GSKIP-207ENST00000556095 BIVM-ERCC5R4GMW8 1640 aa23.32■■□□□ 1.32
GSKIP-207ENST00000556095 NBR1Q14596 966 aa23.31■■□□□ 1.32
GSKIP-207ENST00000556095 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
GSKIP-207ENST00000556095 UACAQ9BZF9 1416 aa23.28■■□□□ 1.32
GSKIP-207ENST00000556095 NBPF8Q3BBV2 869 aa23.28■■□□□ 1.32
GSKIP-207ENST00000556095 PRKRIP1Q9H875 184 aaPredicted RBP23.27■■□□□ 1.32
GSKIP-207ENST00000556095 ST20-MTHFSA0A0A6YYL1 179 aa23.27■■□□□ 1.32
GSKIP-207ENST00000556095 FYCO1Q9BQS8 1478 aa23.25■■□□□ 1.31
GSKIP-207ENST00000556095 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
GSKIP-207ENST00000556095 CANXP27824 592 aaKnown RBP23.21■■□□□ 1.31
GSKIP-207ENST00000556095 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
GSKIP-207ENST00000556095 C11orf95C9JLR9 678 aaPredicted RBP23.21■■□□□ 1.31
GSKIP-207ENST00000556095 PPP4R2Q9NY27 417 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms