RNA–Protein interactions for RNA: ENST00000555818.5

SIPA1L1-211, Transcript of signal induced proliferation associated 1 like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIPA1L1, Length 7,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-211ENST00000555818 PRXQ9BXM0 1461 aa11.77□□□□□ -0.53
SIPA1L1-211ENST00000555818 TOPBP1Q92547 1522 aa11.77□□□□□ -0.53
SIPA1L1-211ENST00000555818 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
SIPA1L1-211ENST00000555818 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
SIPA1L1-211ENST00000555818 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
SIPA1L1-211ENST00000555818 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
SIPA1L1-211ENST00000555818 ABCA10Q8WWZ4 1543 aa11.72□□□□□ -0.53
SIPA1L1-211ENST00000555818 CUL7Q14999 1698 aa11.71□□□□□ -0.53
SIPA1L1-211ENST00000555818 EFCAB5A4FU69 1503 aa11.71□□□□□ -0.54
SIPA1L1-211ENST00000555818 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
SIPA1L1-211ENST00000555818 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
SIPA1L1-211ENST00000555818 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
SIPA1L1-211ENST00000555818 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
SIPA1L1-211ENST00000555818 TRIM52Q96A61 297 aa11.69□□□□□ -0.54
SIPA1L1-211ENST00000555818 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
SIPA1L1-211ENST00000555818 ARHGAP35Q9NRY4 1499 aa11.68□□□□□ -0.54
SIPA1L1-211ENST00000555818 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
SIPA1L1-211ENST00000555818 RAD54L2Q9Y4B4 1467 aa11.66□□□□□ -0.54
SIPA1L1-211ENST00000555818 NESP48681 1621 aa11.66□□□□□ -0.54
SIPA1L1-211ENST00000555818 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
SIPA1L1-211ENST00000555818 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
SIPA1L1-211ENST00000555818 DIEXFQ68CQ4 756 aaKnown RBP11.65□□□□□ -0.54
SIPA1L1-211ENST00000555818 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
SIPA1L1-211ENST00000555818 CCDC18Q5T9S5 1454 aa11.6□□□□□ -0.55
SIPA1L1-211ENST00000555818 TSPY4P0CV99 314 aa11.6□□□□□ -0.55
SIPA1L1-211ENST00000555818 TSPY10P0CW01 314 aa11.6□□□□□ -0.55
SIPA1L1-211ENST00000555818 TIMELESSQ9UNS1 1208 aa11.59□□□□□ -0.55
SIPA1L1-211ENST00000555818 FYCO1Q9BQS8 1478 aa11.59□□□□□ -0.55
SIPA1L1-211ENST00000555818 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
SIPA1L1-211ENST00000555818 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
SIPA1L1-211ENST00000555818 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
SIPA1L1-211ENST00000555818 MAP3K1Q13233 1512 aa11.57□□□□□ -0.56
SIPA1L1-211ENST00000555818 ZNF777Q9ULD5 760 aaPredicted RBP11.56□□□□□ -0.56
SIPA1L1-211ENST00000555818 NEUROD1Q13562 356 aa11.56□□□□□ -0.56
SIPA1L1-211ENST00000555818 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
SIPA1L1-211ENST00000555818 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
SIPA1L1-211ENST00000555818 CFDP1Q9UEE9 299 aaPredicted RBP11.54□□□□□ -0.56
SIPA1L1-211ENST00000555818 AQRO60306 1485 aaKnown RBP eCLIP11.54□□□□□ -0.56
SIPA1L1-211ENST00000555818 SETD5Q9C0A6 1442 aa11.54□□□□□ -0.56
SIPA1L1-211ENST00000555818 WDR97A6NE52 1622 aa11.54□□□□□ -0.56
SIPA1L1-211ENST00000555818 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
SIPA1L1-211ENST00000555818 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.57
SIPA1L1-211ENST00000555818 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
SIPA1L1-211ENST00000555818 LRRC9Q6ZRR7 1453 aa11.5□□□□□ -0.57
SIPA1L1-211ENST00000555818 JPH4Q96JJ6 628 aa11.5□□□□□ -0.57
SIPA1L1-211ENST00000555818 KIAA0586Q9BVV6 1533 aa11.48□□□□□ -0.57
SIPA1L1-211ENST00000555818 RSPH4AQ5TD94 716 aa11.48□□□□□ -0.57
SIPA1L1-211ENST00000555818 IQGAP2Q13576 1575 aa11.47□□□□□ -0.57
SIPA1L1-211ENST00000555818 TIAM1Q13009 1591 aa11.47□□□□□ -0.57
SIPA1L1-211ENST00000555818 HECW1Q76N89 1606 aa11.47□□□□□ -0.57
SIPA1L1-211ENST00000555818 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.57
SIPA1L1-211ENST00000555818 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.58
SIPA1L1-211ENST00000555818 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
SIPA1L1-211ENST00000555818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.45□□□□□ -0.58
SIPA1L1-211ENST00000555818 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
SIPA1L1-211ENST00000555818 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
SIPA1L1-211ENST00000555818 ANP32CO43423 234 aa11.44□□□□□ -0.58
SIPA1L1-211ENST00000555818 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
SIPA1L1-211ENST00000555818 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
SIPA1L1-211ENST00000555818 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
SIPA1L1-211ENST00000555818 CTTNBP2Q8WZ74 1663 aa11.43□□□□□ -0.58
SIPA1L1-211ENST00000555818 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
SIPA1L1-211ENST00000555818 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
SIPA1L1-211ENST00000555818 PTPRGP23470 1445 aa11.42□□□□□ -0.58
SIPA1L1-211ENST00000555818 KIF21AQ7Z4S6 1674 aa11.41□□□□□ -0.58
SIPA1L1-211ENST00000555818 WDR62O43379 1518 aa11.41□□□□□ -0.58
SIPA1L1-211ENST00000555818 RAB3GAP2Q9H2M9 1393 aa11.41□□□□□ -0.58
SIPA1L1-211ENST00000555818 FGD6Q6ZV73 1430 aa11.41□□□□□ -0.58
SIPA1L1-211ENST00000555818 RRP7BPQ9NSQ0 103 aa11.41□□□□□ -0.58
SIPA1L1-211ENST00000555818 RTL5Q5HYW3 569 aaPredicted RBP11.4□□□□□ -0.58
SIPA1L1-211ENST00000555818 ANKRD30AQ9BXX3 1397 aa11.4□□□□□ -0.59
SIPA1L1-211ENST00000555818 GRIN2AQ12879 1464 aa11.39□□□□□ -0.59
SIPA1L1-211ENST00000555818 SUPT6HQ7KZ85 1726 aaKnown RBP11.39□□□□□ -0.59
SIPA1L1-211ENST00000555818 MIA2Q96PC5 1412 aa11.38□□□□□ -0.59
SIPA1L1-211ENST00000555818 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
SIPA1L1-211ENST00000555818 NCOA2Q15596 1464 aa11.36□□□□□ -0.59
SIPA1L1-211ENST00000555818 PCF11O94913 1555 aaKnown RBP11.35□□□□□ -0.59
SIPA1L1-211ENST00000555818 ADAMTS12P58397 1594 aa11.35□□□□□ -0.59
SIPA1L1-211ENST00000555818 EFCAB2Q5VUJ9 269 aa11.35□□□□□ -0.59
SIPA1L1-211ENST00000555818 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
SIPA1L1-211ENST00000555818 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
SIPA1L1-211ENST00000555818 PHLDB1Q86UU1 1377 aa11.32□□□□□ -0.6
SIPA1L1-211ENST00000555818 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
SIPA1L1-211ENST00000555818 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
SIPA1L1-211ENST00000555818 PBRM1Q86U86 1689 aa11.32□□□□□ -0.6
SIPA1L1-211ENST00000555818 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
SIPA1L1-211ENST00000555818 BCANQ96GW7 911 aa11.31□□□□□ -0.6
SIPA1L1-211ENST00000555818 TROQ12816 1431 aaPredicted RBP11.31□□□□□ -0.6
SIPA1L1-211ENST00000555818 UGGT2Q9NYU1 1516 aa11.31□□□□□ -0.6
SIPA1L1-211ENST00000555818 EPRSP07814 1512 aaKnown RBP11.31□□□□□ -0.6
SIPA1L1-211ENST00000555818 KANK1Q14678 1352 aa11.3□□□□□ -0.6
SIPA1L1-211ENST00000555818 PRG4Q92954 1404 aaPredicted RBP11.29□□□□□ -0.6
SIPA1L1-211ENST00000555818 PLEKHH2Q8IVE3 1493 aa11.28□□□□□ -0.6
SIPA1L1-211ENST00000555818 TARBP1Q13395 1621 aaKnown RBP11.28□□□□□ -0.6
SIPA1L1-211ENST00000555818 CFAP43Q8NDM7 1665 aa11.28□□□□□ -0.6
SIPA1L1-211ENST00000555818 UACAQ9BZF9 1416 aa11.28□□□□□ -0.6
SIPA1L1-211ENST00000555818 OSCARQ8IYS5 282 aa11.27□□□□□ -0.6
SIPA1L1-211ENST00000555818 ZNF608Q9ULD9 1512 aaPredicted RBP11.27□□□□□ -0.6
SIPA1L1-211ENST00000555818 ESF1Q9H501 851 aaKnown RBP11.26□□□□□ -0.61
SIPA1L1-211ENST00000555818 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms