RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 KDM6BO15054 1643 aa8.42□□□□□ -1.06
LINC00640-202ENST00000555801 SYNJ1O43426 1573 aa8.39□□□□□ -1.07
LINC00640-202ENST00000555801 SNAPC4Q5SXM2 1469 aa8.39□□□□□ -1.07
LINC00640-202ENST00000555801 CAPN15O75808 1086 aa8.39□□□□□ -1.07
LINC00640-202ENST00000555801 TOPBP1Q92547 1522 aa8.39□□□□□ -1.07
LINC00640-202ENST00000555801 TDRD9Q8NDG6 1382 aaKnown RBP8.37□□□□□ -1.07
LINC00640-202ENST00000555801 SPINK5Q9NQ38 1064 aaPredicted RBP8.35□□□□□ -1.07
LINC00640-202ENST00000555801 WIZO95785 1651 aa8.34□□□□□ -1.07
LINC00640-202ENST00000555801 TSPOAP1O95153 1857 aa8.34□□□□□ -1.07
LINC00640-202ENST00000555801 TARBP1Q13395 1621 aaKnown RBP8.33□□□□□ -1.08
LINC00640-202ENST00000555801 RAD54L2Q9Y4B4 1467 aa8.32□□□□□ -1.08
LINC00640-202ENST00000555801 ABCC10Q5T3U5 1492 aa8.32□□□□□ -1.08
LINC00640-202ENST00000555801 SPATA31D1Q6ZQQ2 1576 aa8.31□□□□□ -1.08
LINC00640-202ENST00000555801 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
LINC00640-202ENST00000555801 DIP2BQ9P265 1576 aa8.27□□□□□ -1.09
LINC00640-202ENST00000555801 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
LINC00640-202ENST00000555801 NPM1P06748 294 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC00640-202ENST00000555801 DNMBPQ6XZF7 1577 aa8.25□□□□□ -1.09
LINC00640-202ENST00000555801 SOGA1O94964 1423 aa8.24□□□□□ -1.09
LINC00640-202ENST00000555801 CERKQ8TCT0 537 aa8.24□□□□□ -1.09
LINC00640-202ENST00000555801 MAGI1Q96QZ7 1491 aaPredicted RBP8.24□□□□□ -1.09
LINC00640-202ENST00000555801 CEP170Q5SW79 1584 aa8.23□□□□□ -1.09
LINC00640-202ENST00000555801 ABCC8Q09428 1581 aa8.22□□□□□ -1.09
LINC00640-202ENST00000555801 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
LINC00640-202ENST00000555801 GRIN2BQ13224 1484 aa8.2□□□□□ -1.1
LINC00640-202ENST00000555801 U3KPZ7 1027 aaPredicted RBP8.2□□□□□ -1.1
LINC00640-202ENST00000555801 COL17A1Q9UMD9 1497 aaPredicted RBP8.19□□□□□ -1.1
LINC00640-202ENST00000555801 MAPKBP1O60336 1514 aa8.17□□□□□ -1.1
LINC00640-202ENST00000555801 HSPA2P54652 639 aa8.16□□□□□ -1.1
LINC00640-202ENST00000555801 PRG4Q92954 1404 aaPredicted RBP8.14□□□□□ -1.11
LINC00640-202ENST00000555801 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
LINC00640-202ENST00000555801 TOP2BQ02880 1626 aa8.14□□□□□ -1.11
LINC00640-202ENST00000555801 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
LINC00640-202ENST00000555801 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
LINC00640-202ENST00000555801 ABCB7O75027 752 aa8.12□□□□□ -1.11
LINC00640-202ENST00000555801 ADCY10Q96PN6 1610 aa8.11□□□□□ -1.11
LINC00640-202ENST00000555801 TTBK1Q5TCY1 1321 aaPredicted RBP8.11□□□□□ -1.11
LINC00640-202ENST00000555801 TOP2AP11388 1531 aaKnown RBP8.11□□□□□ -1.11
LINC00640-202ENST00000555801 GRIN2AQ12879 1464 aa8.11□□□□□ -1.11
LINC00640-202ENST00000555801 PBRM1Q86U86 1689 aa8.11□□□□□ -1.11
LINC00640-202ENST00000555801 PPRC1Q5VV67 1664 aaKnown RBP8.1□□□□□ -1.11
LINC00640-202ENST00000555801 SHROOM2Q13796 1616 aa8.1□□□□□ -1.11
LINC00640-202ENST00000555801 CCDC88BA6NC98 1476 aa8.09□□□□□ -1.11
LINC00640-202ENST00000555801 JPH4Q96JJ6 628 aa8.08□□□□□ -1.12
LINC00640-202ENST00000555801 NUP160Q12769 1436 aa8.08□□□□□ -1.12
LINC00640-202ENST00000555801 PCF11O94913 1555 aaKnown RBP8.08□□□□□ -1.12
LINC00640-202ENST00000555801 PTPRMP28827 1452 aa8.07□□□□□ -1.12
LINC00640-202ENST00000555801 WDR97A6NE52 1622 aa8.07□□□□□ -1.12
LINC00640-202ENST00000555801 KIF21BO75037 1637 aa8.05□□□□□ -1.12
LINC00640-202ENST00000555801 HAX1O00165 279 aa8.02□□□□□ -1.13
LINC00640-202ENST00000555801 ASXL2Q76L83 1435 aa8.01□□□□□ -1.13
LINC00640-202ENST00000555801 ADAMTS12P58397 1594 aa7.99□□□□□ -1.13
LINC00640-202ENST00000555801 ZNF219Q9P2Y4 722 aaPredicted RBP7.99□□□□□ -1.13
LINC00640-202ENST00000555801 CUX1P39880 1505 aa7.98□□□□□ -1.13
LINC00640-202ENST00000555801 ABCA5Q8WWZ7 1642 aa7.97□□□□□ -1.13
LINC00640-202ENST00000555801 ARID4BQ4LE39 1312 aaPredicted RBP7.97□□□□□ -1.13
LINC00640-202ENST00000555801 GLI2P10070 1586 aa7.97□□□□□ -1.13
LINC00640-202ENST00000555801 TEX14Q8IWB6 1497 aa7.96□□□□□ -1.13
LINC00640-202ENST00000555801 ADAMTSL3P82987 1691 aa7.95□□□□□ -1.14
LINC00640-202ENST00000555801 PLB1Q6P1J6 1458 aa7.95□□□□□ -1.14
LINC00640-202ENST00000555801 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
LINC00640-202ENST00000555801 MADDQ8WXG6 1647 aa7.94□□□□□ -1.14
LINC00640-202ENST00000555801 MAP3K4Q9Y6R4 1608 aa7.93□□□□□ -1.14
LINC00640-202ENST00000555801 EPRSP07814 1512 aaKnown RBP7.93□□□□□ -1.14
LINC00640-202ENST00000555801 PIP4P2Q8N4L2 257 aa7.92□□□□□ -1.14
LINC00640-202ENST00000555801 ABCA10Q8WWZ4 1543 aa7.92□□□□□ -1.14
LINC00640-202ENST00000555801 MED1Q15648 1581 aaPredicted RBP7.92□□□□□ -1.14
LINC00640-202ENST00000555801 PTPRGP23470 1445 aa7.91□□□□□ -1.14
LINC00640-202ENST00000555801 ABCC2Q92887 1545 aa7.91□□□□□ -1.14
LINC00640-202ENST00000555801 CUL7Q14999 1698 aa7.9□□□□□ -1.14
LINC00640-202ENST00000555801 RIMS1Q86UR5 1692 aaKnown RBP7.9□□□□□ -1.14
LINC00640-202ENST00000555801 UBAP1LF5GYI3 381 aa7.9□□□□□ -1.14
LINC00640-202ENST00000555801 APLP2Q06481 763 aa7.9□□□□□ -1.14
LINC00640-202ENST00000555801 NCBP3Q53F19 620 aaKnown RBP7.9□□□□□ -1.14
LINC00640-202ENST00000555801 LHX8Q68G74 356 aa7.9□□□□□ -1.14
LINC00640-202ENST00000555801 RUSC2Q8N2Y8 1516 aa7.89□□□□□ -1.15
LINC00640-202ENST00000555801 HSPA1LP34931 641 aa7.87□□□□□ -1.15
LINC00640-202ENST00000555801 KCNH8Q96L42 1107 aa7.87□□□□□ -1.15
LINC00640-202ENST00000555801 BCORL1Q5H9F3 1711 aa7.86□□□□□ -1.15
LINC00640-202ENST00000555801 KIAA0586Q9BVV6 1533 aa7.84□□□□□ -1.15
LINC00640-202ENST00000555801 RAPGEF3O95398 923 aa7.84□□□□□ -1.15
LINC00640-202ENST00000555801 PIP4K2BP78356 416 aa7.84□□□□□ -1.15
LINC00640-202ENST00000555801 EVX2Q03828 476 aa7.84□□□□□ -1.15
LINC00640-202ENST00000555801 MLECQ14165 292 aa7.84□□□□□ -1.15
LINC00640-202ENST00000555801 CD109Q6YHK3 1445 aa7.84□□□□□ -1.15
LINC00640-202ENST00000555801 YEATS2Q9ULM3 1422 aa7.84□□□□□ -1.15
LINC00640-202ENST00000555801 LTBP4Q8N2S1 1624 aa7.82□□□□□ -1.16
LINC00640-202ENST00000555801 STRCQ7RTU9 1775 aa7.82□□□□□ -1.16
LINC00640-202ENST00000555801 CEBPAP49715 358 aaPredicted RBP7.81□□□□□ -1.16
LINC00640-202ENST00000555801 TNIKQ9UKE5 1360 aa7.8□□□□□ -1.16
LINC00640-202ENST00000555801 UACAQ9BZF9 1416 aa7.79□□□□□ -1.16
LINC00640-202ENST00000555801 MAGI3Q5TCQ9 1506 aa7.79□□□□□ -1.16
LINC00640-202ENST00000555801 ZCCHC11Q5TAX3 1644 aaKnown RBP7.78□□□□□ -1.16
LINC00640-202ENST00000555801 AKT1S1Q96B36 256 aa7.78□□□□□ -1.16
LINC00640-202ENST00000555801 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
LINC00640-202ENST00000555801 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
LINC00640-202ENST00000555801 WDR7Q9Y4E6 1490 aa7.77□□□□□ -1.17
LINC00640-202ENST00000555801 RGS17Q9UGC6 210 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-202ENST00000555801 ZNF335Q9H4Z2 1342 aaPredicted RBP7.77□□□□□ -1.17
LINC00640-202ENST00000555801 UHRF1BP1LA0JNW5 1464 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms