RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 DSG3P32926 999 aa10.24□□□□□ -0.77
TMEM260-205ENST00000554981 CFTRP13569 1480 aa10.23□□□□□ -0.77
TMEM260-205ENST00000554981 FBLN2P98095 1184 aa10.23□□□□□ -0.77
TMEM260-205ENST00000554981 EIF4G3O43432 1585 aaKnown RBP10.22□□□□□ -0.77
TMEM260-205ENST00000554981 FKBP8Q14318 412 aa10.22□□□□□ -0.77
TMEM260-205ENST00000554981 IFT140Q96RY7 1462 aa10.22□□□□□ -0.77
TMEM260-205ENST00000554981 ABCB7O75027 752 aa10.19□□□□□ -0.78
TMEM260-205ENST00000554981 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
TMEM260-205ENST00000554981 TOPBP1Q92547 1522 aa10.12□□□□□ -0.79
TMEM260-205ENST00000554981 CCDC88BA6NC98 1476 aa10.11□□□□□ -0.79
TMEM260-205ENST00000554981 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
TMEM260-205ENST00000554981 CLASP1Q7Z460 1538 aa10.11□□□□□ -0.79
TMEM260-205ENST00000554981 PRDM2Q13029 1718 aa10.1□□□□□ -0.79
TMEM260-205ENST00000554981 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
TMEM260-205ENST00000554981 MKRN4PQ13434 485 aaPredicted RBP10.06□□□□□ -0.8
TMEM260-205ENST00000554981 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
TMEM260-205ENST00000554981 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
TMEM260-205ENST00000554981 SNAPC4Q5SXM2 1469 aa10.04□□□□□ -0.8
TMEM260-205ENST00000554981 DNMBPQ6XZF7 1577 aa10.03□□□□□ -0.8
TMEM260-205ENST00000554981 TDRD9Q8NDG6 1382 aaKnown RBP10.02□□□□□ -0.8
TMEM260-205ENST00000554981 SYNJ1O43426 1573 aa10.02□□□□□ -0.81
TMEM260-205ENST00000554981 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
TMEM260-205ENST00000554981 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
TMEM260-205ENST00000554981 RAD54L2Q9Y4B4 1467 aa10.01□□□□□ -0.81
TMEM260-205ENST00000554981 POLA1P09884 1462 aaPredicted RBP9.99□□□□□ -0.81
TMEM260-205ENST00000554981 KIF13AQ9H1H9 1805 aa9.98□□□□□ -0.81
TMEM260-205ENST00000554981 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
TMEM260-205ENST00000554981 ERCC6L2Q5T890 1561 aa9.98□□□□□ -0.81
TMEM260-205ENST00000554981 SUPT5HO00267 1087 aaKnown RBP9.98□□□□□ -0.81
TMEM260-205ENST00000554981 SOGA1O94964 1423 aa9.93□□□□□ -0.82
TMEM260-205ENST00000554981 SYNJ2O15056 1496 aa9.92□□□□□ -0.82
TMEM260-205ENST00000554981 MAGI1Q96QZ7 1491 aaPredicted RBP9.92□□□□□ -0.82
TMEM260-205ENST00000554981 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
TMEM260-205ENST00000554981 KDM6BO15054 1643 aa9.87□□□□□ -0.83
TMEM260-205ENST00000554981 FAM69CQ0P6D2 419 aa9.87□□□□□ -0.83
TMEM260-205ENST00000554981 FGD5Q6ZNL6 1462 aa9.86□□□□□ -0.83
TMEM260-205ENST00000554981 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
TMEM260-205ENST00000554981 HECW2Q9P2P5 1572 aa9.86□□□□□ -0.83
TMEM260-205ENST00000554981 CUX1P39880 1505 aa9.86□□□□□ -0.83
TMEM260-205ENST00000554981 CEP170Q5SW79 1584 aa9.85□□□□□ -0.83
TMEM260-205ENST00000554981 PBRM1Q86U86 1689 aa9.85□□□□□ -0.83
TMEM260-205ENST00000554981 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
TMEM260-205ENST00000554981 FBXO3Q9UK99 471 aa9.83□□□□□ -0.84
TMEM260-205ENST00000554981 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
TMEM260-205ENST00000554981 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
TMEM260-205ENST00000554981 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
TMEM260-205ENST00000554981 ABCC10Q5T3U5 1492 aa9.82□□□□□ -0.84
TMEM260-205ENST00000554981 TSPOAP1O95153 1857 aa9.81□□□□□ -0.84
TMEM260-205ENST00000554981 ADGRL1O94910 1474 aa9.81□□□□□ -0.84
TMEM260-205ENST00000554981 DIP2BQ9P265 1576 aa9.8□□□□□ -0.84
TMEM260-205ENST00000554981 FBXO41Q8TF61 875 aa9.8□□□□□ -0.84
TMEM260-205ENST00000554981 GRIN2AQ12879 1464 aa9.78□□□□□ -0.84
TMEM260-205ENST00000554981 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
TMEM260-205ENST00000554981 PROM2Q8N271 834 aa9.77□□□□□ -0.85
TMEM260-205ENST00000554981 NUP160Q12769 1436 aa9.74□□□□□ -0.85
TMEM260-205ENST00000554981 LMTK3Q96Q04 1460 aa9.74□□□□□ -0.85
TMEM260-205ENST00000554981 ABCA5Q8WWZ7 1642 aa9.74□□□□□ -0.85
TMEM260-205ENST00000554981 MAPKBP1O60336 1514 aa9.73□□□□□ -0.85
TMEM260-205ENST00000554981 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
TMEM260-205ENST00000554981 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
TMEM260-205ENST00000554981 PRG4Q92954 1404 aaPredicted RBP9.73□□□□□ -0.85
TMEM260-205ENST00000554981 BIVM-ERCC5R4GMW8 1640 aa9.72□□□□□ -0.85
TMEM260-205ENST00000554981 ADAMTS12P58397 1594 aa9.71□□□□□ -0.85
TMEM260-205ENST00000554981 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.86
TMEM260-205ENST00000554981 WRNQ14191 1432 aaPredicted RBP eCLIP9.71□□□□□ -0.86
TMEM260-205ENST00000554981 TOP2BQ02880 1626 aa9.71□□□□□ -0.86
TMEM260-205ENST00000554981 ADCY10Q96PN6 1610 aa9.71□□□□□ -0.86
TMEM260-205ENST00000554981 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
TMEM260-205ENST00000554981 ILDR2Q71H61 639 aa9.69□□□□□ -0.86
TMEM260-205ENST00000554981 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
TMEM260-205ENST00000554981 JPH4Q96JJ6 628 aa9.66□□□□□ -0.86
TMEM260-205ENST00000554981 PPRC1Q5VV67 1664 aaKnown RBP9.65□□□□□ -0.86
TMEM260-205ENST00000554981 COL17A1Q9UMD9 1497 aaPredicted RBP9.65□□□□□ -0.87
TMEM260-205ENST00000554981 SOCS7O14512 581 aa9.64□□□□□ -0.87
TMEM260-205ENST00000554981 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
TMEM260-205ENST00000554981 FHAD1B1AJZ9 1412 aa9.63□□□□□ -0.87
TMEM260-205ENST00000554981 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
TMEM260-205ENST00000554981 DISP3Q9P2K9 1392 aa9.6□□□□□ -0.87
TMEM260-205ENST00000554981 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
TMEM260-205ENST00000554981 RUSC2Q8N2Y8 1516 aa9.59□□□□□ -0.87
TMEM260-205ENST00000554981 TTBK1Q5TCY1 1321 aaPredicted RBP9.58□□□□□ -0.88
TMEM260-205ENST00000554981 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
TMEM260-205ENST00000554981 ERICH3Q5RHP9 1530 aa9.57□□□□□ -0.88
TMEM260-205ENST00000554981 POTEHQ6S545 545 aa9.57□□□□□ -0.88
TMEM260-205ENST00000554981 ASXL2Q76L83 1435 aa9.55□□□□□ -0.88
TMEM260-205ENST00000554981 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
TMEM260-205ENST00000554981 GLI2P10070 1586 aa9.54□□□□□ -0.88
TMEM260-205ENST00000554981 MIER1Q8N108 512 aa9.53□□□□□ -0.88
TMEM260-205ENST00000554981 KLHL34Q8N239 644 aa9.53□□□□□ -0.88
TMEM260-205ENST00000554981 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
TMEM260-205ENST00000554981 CUL7Q14999 1698 aa9.51□□□□□ -0.89
TMEM260-205ENST00000554981 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
TMEM260-205ENST00000554981 KIF21BO75037 1637 aa9.51□□□□□ -0.89
TMEM260-205ENST00000554981 KIF27Q86VH2 1401 aa9.5□□□□□ -0.89
TMEM260-205ENST00000554981 MAP3K4Q9Y6R4 1608 aa9.5□□□□□ -0.89
TMEM260-205ENST00000554981 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
TMEM260-205ENST00000554981 PLB1Q6P1J6 1458 aa9.5□□□□□ -0.89
TMEM260-205ENST00000554981 ABCC2Q92887 1545 aa9.5□□□□□ -0.89
TMEM260-205ENST00000554981 PTPRGP23470 1445 aa9.49□□□□□ -0.89
TMEM260-205ENST00000554981 IFNLR1Q8IU57 520 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms