RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
XRCC3-209ENST00000554913 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
XRCC3-209ENST00000554913 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
XRCC3-209ENST00000554913 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
XRCC3-209ENST00000554913 PHLDB1Q86UU1 1377 aa23.85■■□□□ 1.41
XRCC3-209ENST00000554913 LRRC9Q6ZRR7 1453 aa23.84■■□□□ 1.41
XRCC3-209ENST00000554913 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
XRCC3-209ENST00000554913 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
XRCC3-209ENST00000554913 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
XRCC3-209ENST00000554913 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
XRCC3-209ENST00000554913 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
XRCC3-209ENST00000554913 DDX10Q13206 875 aaKnown RBP23.75■■□□□ 1.39
XRCC3-209ENST00000554913 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
XRCC3-209ENST00000554913 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
XRCC3-209ENST00000554913 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
XRCC3-209ENST00000554913 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.38
XRCC3-209ENST00000554913 PCF11O94913 1555 aaKnown RBP23.69■■□□□ 1.38
XRCC3-209ENST00000554913 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
XRCC3-209ENST00000554913 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
XRCC3-209ENST00000554913 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
XRCC3-209ENST00000554913 CFAP43Q8NDM7 1665 aa23.65■■□□□ 1.38
XRCC3-209ENST00000554913 POLA1P09884 1462 aaPredicted RBP23.64■■□□□ 1.37
XRCC3-209ENST00000554913 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.37
XRCC3-209ENST00000554913 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.37
XRCC3-209ENST00000554913 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.37
XRCC3-209ENST00000554913 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
XRCC3-209ENST00000554913 TIMELESSQ9UNS1 1208 aa23.6■■□□□ 1.37
XRCC3-209ENST00000554913 BCANQ96GW7 911 aa23.59■■□□□ 1.37
XRCC3-209ENST00000554913 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.36
XRCC3-209ENST00000554913 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
XRCC3-209ENST00000554913 FKBP8Q14318 412 aa23.55■■□□□ 1.36
XRCC3-209ENST00000554913 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
XRCC3-209ENST00000554913 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
XRCC3-209ENST00000554913 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
XRCC3-209ENST00000554913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.51■■□□□ 1.353e-6■■■■□ 21.3
XRCC3-209ENST00000554913 EFCAB5A4FU69 1503 aa23.47■■□□□ 1.35
XRCC3-209ENST00000554913 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.356e-6■■■■□ 25.1
XRCC3-209ENST00000554913 ANP32CO43423 234 aa23.46■■□□□ 1.35
XRCC3-209ENST00000554913 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
XRCC3-209ENST00000554913 FGD6Q6ZV73 1430 aa23.46■■□□□ 1.35
XRCC3-209ENST00000554913 CCER2I3L3R5 266 aa23.46■■□□□ 1.35
XRCC3-209ENST00000554913 TONSLQ96HA7 1378 aa23.43■■□□□ 1.34
XRCC3-209ENST00000554913 PTPRKQ15262 1439 aa23.41■■□□□ 1.34
XRCC3-209ENST00000554913 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
XRCC3-209ENST00000554913 CCDC18Q5T9S5 1454 aa23.41■■□□□ 1.34
XRCC3-209ENST00000554913 FMN1Q68DA7 1419 aa23.39■■□□□ 1.33
XRCC3-209ENST00000554913 MTUS2Q5JR59 1369 aa23.38■■□□□ 1.33
XRCC3-209ENST00000554913 SNAPC4Q5SXM2 1469 aa23.37■■□□□ 1.33
XRCC3-209ENST00000554913 NEFLP07196 543 aa23.36■■□□□ 1.33
XRCC3-209ENST00000554913 CTTNBP2Q8WZ74 1663 aa23.36■■□□□ 1.33
XRCC3-209ENST00000554913 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
XRCC3-209ENST00000554913 CUL7Q14999 1698 aa23.35■■□□□ 1.33
XRCC3-209ENST00000554913 UACAQ9BZF9 1416 aa23.35■■□□□ 1.33
XRCC3-209ENST00000554913 ANP32EQ9BTT0 268 aa23.35■■□□□ 1.33
XRCC3-209ENST00000554913 PTPN23Q9H3S7 1636 aa23.32■■□□□ 1.32
XRCC3-209ENST00000554913 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
XRCC3-209ENST00000554913 NAIPQ13075 1403 aa23.3■■□□□ 1.32
XRCC3-209ENST00000554913 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
XRCC3-209ENST00000554913 NCOA2Q15596 1464 aa23.28■■□□□ 1.32
XRCC3-209ENST00000554913 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
XRCC3-209ENST00000554913 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
XRCC3-209ENST00000554913 LRRIQ1Q96JM4 1722 aa23.26■■□□□ 1.31
XRCC3-209ENST00000554913 MRC2Q9UBG0 1479 aa23.25■■□□□ 1.31
XRCC3-209ENST00000554913 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
XRCC3-209ENST00000554913 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
XRCC3-209ENST00000554913 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
XRCC3-209ENST00000554913 RBM19Q9Y4C8 960 aaKnown RBP23.21■■□□□ 1.31
XRCC3-209ENST00000554913 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
XRCC3-209ENST00000554913 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
XRCC3-209ENST00000554913 SUPT6HQ7KZ85 1726 aaKnown RBP23.16■■□□□ 1.3
XRCC3-209ENST00000554913 HNRNPUQ00839 825 aaKnown RBP eCLIP23.15■■□□□ 1.3
XRCC3-209ENST00000554913 EHBP1L1Q8N3D4 1523 aa23.14■■□□□ 1.3
XRCC3-209ENST00000554913 HSPA5P11021 654 aaKnown RBP23.14■■□□□ 1.29
XRCC3-209ENST00000554913 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
XRCC3-209ENST00000554913 MAGI3Q5TCQ9 1506 aa23.12■■□□□ 1.29
XRCC3-209ENST00000554913 UGGT2Q9NYU1 1516 aa23.12■■□□□ 1.29
XRCC3-209ENST00000554913 THOC2Q8NI27 1593 aaKnown RBP23.11■■□□□ 1.29
XRCC3-209ENST00000554913 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
XRCC3-209ENST00000554913 WDR62O43379 1518 aa23.11■■□□□ 1.29
XRCC3-209ENST00000554913 DENND4BO75064 1496 aaPredicted RBP23.1■■□□□ 1.29
XRCC3-209ENST00000554913 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
XRCC3-209ENST00000554913 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
XRCC3-209ENST00000554913 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
XRCC3-209ENST00000554913 IRX6P78412 446 aaPredicted RBP23.07■■□□□ 1.28
XRCC3-209ENST00000554913 EIF4G2P78344 907 aaKnown RBP eCLIP23.04■■□□□ 1.28
XRCC3-209ENST00000554913 TCOF1Q13428 1488 aaKnown RBP23.03■■□□□ 1.28
XRCC3-209ENST00000554913 KDM6BO15054 1643 aa23.03■■□□□ 1.28
XRCC3-209ENST00000554913 CCDC184Q52MB2 194 aa23.02■■□□□ 1.27
XRCC3-209ENST00000554913 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.27
XRCC3-209ENST00000554913 FOXD1Q16676 465 aa23.01■■□□□ 1.27
XRCC3-209ENST00000554913 IFT140Q96RY7 1462 aa23■■□□□ 1.27
XRCC3-209ENST00000554913 L3MBTL2Q969R5 705 aa23■■□□□ 1.27
XRCC3-209ENST00000554913 GCC2Q8IWJ2 1684 aa23■■□□□ 1.27
XRCC3-209ENST00000554913 HECW1Q76N89 1606 aa23■■□□□ 1.27
XRCC3-209ENST00000554913 ARID3CA6NKF2 412 aa22.98■■□□□ 1.27
XRCC3-209ENST00000554913 C11orf95C9JLR9 678 aaPredicted RBP22.98■■□□□ 1.27
XRCC3-209ENST00000554913 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
XRCC3-209ENST00000554913 AKNAQ7Z591 1439 aa22.96■■□□□ 1.27
XRCC3-209ENST00000554913 CNTLNQ9NXG0 1405 aa22.96■■□□□ 1.27
XRCC3-209ENST00000554913 EPRSP07814 1512 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms