RNA–Protein interactions for RNA: ENST00000553964.5

CALM1-207, Transcript of calmodulin 1, humanhuman

TSL 1 (best)

Gene CALM1, Length 2,670 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-207ENST00000553964 POLA1P09884 1462 aaPredicted RBP28.23■■■□□ 2.11
CALM1-207ENST00000553964 TOPBP1Q92547 1522 aa28.22■■■□□ 2.11
CALM1-207ENST00000553964 CLSPNQ9HAW4 1339 aa28.21■■■□□ 2.11
CALM1-207ENST00000553964 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
CALM1-207ENST00000553964 TIAM1Q13009 1591 aa28.14■■■□□ 2.1
CALM1-207ENST00000553964 FHOD3Q2V2M9 1422 aa28.14■■■□□ 2.09
CALM1-207ENST00000553964 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
CALM1-207ENST00000553964 SUPT16HQ9Y5B9 1047 aaKnown RBP28.1■■■□□ 2.09
CALM1-207ENST00000553964 PHLDB1Q86UU1 1377 aa28.09■■■□□ 2.09
CALM1-207ENST00000553964 TDRD9Q8NDG6 1382 aaKnown RBP28.07■■■□□ 2.08
CALM1-207ENST00000553964 FAM50AQ14320 339 aaKnown RBP28.07■■■□□ 2.08
CALM1-207ENST00000553964 LRRC9Q6ZRR7 1453 aa28.07■■■□□ 2.08
CALM1-207ENST00000553964 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
CALM1-207ENST00000553964 PCF11O94913 1555 aaKnown RBP28.06■■■□□ 2.08
CALM1-207ENST00000553964 RAB3GAP2Q9H2M9 1393 aa28.02■■■□□ 2.08
CALM1-207ENST00000553964 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
CALM1-207ENST00000553964 TSHZ2Q9NRE2 1034 aa27.96■■■□□ 2.07
CALM1-207ENST00000553964 MAP3K1Q13233 1512 aa27.93■■■□□ 2.06
CALM1-207ENST00000553964 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
CALM1-207ENST00000553964 KCNH8Q96L42 1107 aa27.87■■■□□ 2.05
CALM1-207ENST00000553964 CUL7Q14999 1698 aa27.86■■■□□ 2.05
CALM1-207ENST00000553964 CFAP43Q8NDM7 1665 aa27.86■■■□□ 2.05
CALM1-207ENST00000553964 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
CALM1-207ENST00000553964 SIN3AQ96ST3 1273 aa27.84■■■□□ 2.05
CALM1-207ENST00000553964 ANP32EQ9BTT0 268 aa27.84■■■□□ 2.05
CALM1-207ENST00000553964 MAPKBP1O60336 1514 aa27.84■■■□□ 2.05
CALM1-207ENST00000553964 CTTNBP2Q8WZ74 1663 aa27.83■■■□□ 2.05
CALM1-207ENST00000553964 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
CALM1-207ENST00000553964 WDR97A6NE52 1622 aa27.82■■■□□ 2.04
CALM1-207ENST00000553964 CASKIN1Q8WXD9 1431 aa27.81■■■□□ 2.04
CALM1-207ENST00000553964 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
CALM1-207ENST00000553964 FYCO1Q9BQS8 1478 aa27.8■■■□□ 2.04
CALM1-207ENST00000553964 PDS5BQ9NTI5 1447 aa27.8■■■□□ 2.04
CALM1-207ENST00000553964 EFCAB5A4FU69 1503 aa27.78■■■□□ 2.04
CALM1-207ENST00000553964 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
CALM1-207ENST00000553964 BCL11AQ9H165 835 aa27.76■■■□□ 2.04
CALM1-207ENST00000553964 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
CALM1-207ENST00000553964 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
CALM1-207ENST00000553964 MTUS2Q5JR59 1369 aa27.69■■■□□ 2.02
CALM1-207ENST00000553964 DDX10Q13206 875 aaKnown RBP27.68■■■□□ 2.02
CALM1-207ENST00000553964 AQRO60306 1485 aaKnown RBP eCLIP27.67■■■□□ 2.021e-6■■■■□ 21.8
CALM1-207ENST00000553964 ARID3CA6NKF2 412 aa27.66■■■□□ 2.02
CALM1-207ENST00000553964 HIRIP3Q9BW71 556 aaPredicted RBP27.65■■■□□ 2.02
CALM1-207ENST00000553964 LRRIQ1Q96JM4 1722 aa27.64■■■□□ 2.02
CALM1-207ENST00000553964 BCANQ96GW7 911 aa27.64■■■□□ 2.01
CALM1-207ENST00000553964 FGD6Q6ZV73 1430 aa27.63■■■□□ 2.01
CALM1-207ENST00000553964 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
CALM1-207ENST00000553964 SAMD9Q5K651 1589 aa27.61■■■□□ 2.01
CALM1-207ENST00000553964 PTPRKQ15262 1439 aa27.59■■■□□ 2.01
CALM1-207ENST00000553964 GRIN2BQ13224 1484 aa27.55■■■□□ 2
CALM1-207ENST00000553964 NCOA2Q15596 1464 aa27.53■■■□□ 2
CALM1-207ENST00000553964 MAGI3Q5TCQ9 1506 aa27.48■■□□□ 1.99
CALM1-207ENST00000553964 CHIC2Q9UKJ5 165 aa27.47■■□□□ 1.99
CALM1-207ENST00000553964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.46■■□□□ 1.991e-7■■■■□ 24.1
CALM1-207ENST00000553964 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
CALM1-207ENST00000553964 PPP1R15AO75807 674 aaPredicted RBP27.44■■□□□ 1.98
CALM1-207ENST00000553964 MYOM3Q5VTT5 1437 aa27.44■■□□□ 1.98
CALM1-207ENST00000553964 ZNF608Q9ULD9 1512 aaPredicted RBP27.44■■□□□ 1.98
CALM1-207ENST00000553964 CCDC18Q5T9S5 1454 aa27.44■■□□□ 1.98
CALM1-207ENST00000553964 RRP7BPQ9NSQ0 103 aa27.43■■□□□ 1.98
CALM1-207ENST00000553964 FKBP8Q14318 412 aa27.4■■□□□ 1.98
CALM1-207ENST00000553964 MRC2Q9UBG0 1479 aa27.39■■□□□ 1.98
CALM1-207ENST00000553964 TRIM52Q96A61 297 aa27.38■■□□□ 1.97
CALM1-207ENST00000553964 CDK13Q14004 1512 aaKnown RBP27.38■■□□□ 1.97
CALM1-207ENST00000553964 SUPT6HQ7KZ85 1726 aaKnown RBP27.37■■□□□ 1.97
CALM1-207ENST00000553964 HFM1A2PYH4 1435 aa27.37■■□□□ 1.97
CALM1-207ENST00000553964 IQGAP2Q13576 1575 aa27.36■■□□□ 1.97
CALM1-207ENST00000553964 NAIPQ13075 1403 aa27.36■■□□□ 1.97
CALM1-207ENST00000553964 ADAMTS12P58397 1594 aa27.36■■□□□ 1.97
CALM1-207ENST00000553964 PTPN23Q9H3S7 1636 aa27.35■■□□□ 1.97
CALM1-207ENST00000553964 EHBP1L1Q8N3D4 1523 aa27.35■■□□□ 1.97
CALM1-207ENST00000553964 TIMELESSQ9UNS1 1208 aa27.33■■□□□ 1.97
CALM1-207ENST00000553964 UGGT2Q9NYU1 1516 aa27.32■■□□□ 1.96
CALM1-207ENST00000553964 EPRSP07814 1512 aaKnown RBP27.3■■□□□ 1.96
CALM1-207ENST00000553964 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
CALM1-207ENST00000553964 TONSLQ96HA7 1378 aa27.29■■□□□ 1.96
CALM1-207ENST00000553964 ANP32CO43423 234 aa27.29■■□□□ 1.96
CALM1-207ENST00000553964 RBM19Q9Y4C8 960 aaKnown RBP27.29■■□□□ 1.96
CALM1-207ENST00000553964 UACAQ9BZF9 1416 aa27.29■■□□□ 1.96
CALM1-207ENST00000553964 ARHGEF11O15085 1522 aa27.25■■□□□ 1.95
CALM1-207ENST00000553964 HECW1Q76N89 1606 aa27.24■■□□□ 1.95
CALM1-207ENST00000553964 FOXD1Q16676 465 aa27.2■■□□□ 1.94
CALM1-207ENST00000553964 WDR62O43379 1518 aa27.19■■□□□ 1.94
CALM1-207ENST00000553964 KDM6BO15054 1643 aa27.19■■□□□ 1.94
CALM1-207ENST00000553964 CCER2I3L3R5 266 aa27.19■■□□□ 1.94
CALM1-207ENST00000553964 IFT140Q96RY7 1462 aa27.18■■□□□ 1.94
CALM1-207ENST00000553964 FBLN2P98095 1184 aa27.18■■□□□ 1.94
CALM1-207ENST00000553964 ZNF644Q9H582 1327 aaPredicted RBP27.18■■□□□ 1.94
CALM1-207ENST00000553964 NEFLP07196 543 aa27.15■■□□□ 1.94
CALM1-207ENST00000553964 MSH5O43196 834 aa27.14■■□□□ 1.94
CALM1-207ENST00000553964 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
CALM1-207ENST00000553964 DENND4BO75064 1496 aaPredicted RBP27.12■■□□□ 1.93
CALM1-207ENST00000553964 TCOF1Q13428 1488 aaKnown RBP27.12■■□□□ 1.93
CALM1-207ENST00000553964 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
CALM1-207ENST00000553964 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
CALM1-207ENST00000553964 KIAA0586Q9BVV6 1533 aa27.09■■□□□ 1.93
CALM1-207ENST00000553964 GRIN2AQ12879 1464 aa27.07■■□□□ 1.92
CALM1-207ENST00000553964 KIAA0556O60303 1618 aa27.07■■□□□ 1.92
CALM1-207ENST00000553964 CHMP7Q8WUX9 453 aaPredicted RBP27.07■■□□□ 1.92
CALM1-207ENST00000553964 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms