RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 FAM50AQ14320 339 aaKnown RBP17.53■□□□□ 0.4
SPTB-206ENST00000553938 CUX2O14529 1486 aa17.51■□□□□ 0.39
SPTB-206ENST00000553938 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
SPTB-206ENST00000553938 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
SPTB-206ENST00000553938 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
SPTB-206ENST00000553938 IGF1RP08069 1367 aa17.48■□□□□ 0.39
SPTB-206ENST00000553938 CFTRP13569 1480 aa17.45■□□□□ 0.38
SPTB-206ENST00000553938 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
SPTB-206ENST00000553938 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
SPTB-206ENST00000553938 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
SPTB-206ENST00000553938 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
SPTB-206ENST00000553938 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
SPTB-206ENST00000553938 TSHZ2Q9NRE2 1034 aa17.38■□□□□ 0.37
SPTB-206ENST00000553938 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
SPTB-206ENST00000553938 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
SPTB-206ENST00000553938 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
SPTB-206ENST00000553938 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
SPTB-206ENST00000553938 TIAM1Q13009 1591 aa17.37■□□□□ 0.37
SPTB-206ENST00000553938 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
SPTB-206ENST00000553938 RAD54L2Q9Y4B4 1467 aa17.35■□□□□ 0.37
SPTB-206ENST00000553938 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.37
SPTB-206ENST00000553938 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
SPTB-206ENST00000553938 SETD5Q9C0A6 1442 aa17.32■□□□□ 0.36
SPTB-206ENST00000553938 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
SPTB-206ENST00000553938 FKBP8Q14318 412 aa17.29■□□□□ 0.36
SPTB-206ENST00000553938 NESP48681 1621 aa17.27■□□□□ 0.36
SPTB-206ENST00000553938 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
SPTB-206ENST00000553938 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
SPTB-206ENST00000553938 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
SPTB-206ENST00000553938 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
SPTB-206ENST00000553938 PPP1R15AO75807 674 aaPredicted RBP17.24■□□□□ 0.35
SPTB-206ENST00000553938 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
SPTB-206ENST00000553938 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
SPTB-206ENST00000553938 CHIC2Q9UKJ5 165 aa17.17■□□□□ 0.34
SPTB-206ENST00000553938 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.347e-7■■■□□ 18.6
SPTB-206ENST00000553938 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
SPTB-206ENST00000553938 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
SPTB-206ENST00000553938 FOXD1Q16676 465 aa17.13■□□□□ 0.33
SPTB-206ENST00000553938 CFAP43Q8NDM7 1665 aa17.13■□□□□ 0.33
SPTB-206ENST00000553938 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
SPTB-206ENST00000553938 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
SPTB-206ENST00000553938 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
SPTB-206ENST00000553938 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
SPTB-206ENST00000553938 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
SPTB-206ENST00000553938 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
SPTB-206ENST00000553938 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
SPTB-206ENST00000553938 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
SPTB-206ENST00000553938 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
SPTB-206ENST00000553938 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
SPTB-206ENST00000553938 FGD6Q6ZV73 1430 aa17.06■□□□□ 0.32
SPTB-206ENST00000553938 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
SPTB-206ENST00000553938 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
SPTB-206ENST00000553938 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
SPTB-206ENST00000553938 MTUS2Q5JR59 1369 aa17.05■□□□□ 0.32
SPTB-206ENST00000553938 TONSLQ96HA7 1378 aa17.05■□□□□ 0.32
SPTB-206ENST00000553938 ANP32CO43423 234 aa17.04■□□□□ 0.32
SPTB-206ENST00000553938 TIMELESSQ9UNS1 1208 aa17.03■□□□□ 0.32
SPTB-206ENST00000553938 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
SPTB-206ENST00000553938 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.32
SPTB-206ENST00000553938 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
SPTB-206ENST00000553938 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
SPTB-206ENST00000553938 KDM6BO15054 1643 aa17■□□□□ 0.31
SPTB-206ENST00000553938 KLHL34Q8N239 644 aa17■□□□□ 0.31
SPTB-206ENST00000553938 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
SPTB-206ENST00000553938 C11orf95C9JLR9 678 aaPredicted RBP16.99■□□□□ 0.31
SPTB-206ENST00000553938 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
SPTB-206ENST00000553938 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
SPTB-206ENST00000553938 NAIPQ13075 1403 aa16.98■□□□□ 0.31
SPTB-206ENST00000553938 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
SPTB-206ENST00000553938 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
SPTB-206ENST00000553938 URB2Q14146 1524 aaKnown RBP16.97■□□□□ 0.31
SPTB-206ENST00000553938 NCOA2Q15596 1464 aa16.97■□□□□ 0.31
SPTB-206ENST00000553938 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
SPTB-206ENST00000553938 DENND4BO75064 1496 aaPredicted RBP16.96■□□□□ 0.31
SPTB-206ENST00000553938 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
SPTB-206ENST00000553938 DNMBPQ6XZF7 1577 aa16.96■□□□□ 0.31
SPTB-206ENST00000553938 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
SPTB-206ENST00000553938 CTTNBP2Q8WZ74 1663 aa16.95■□□□□ 0.3
SPTB-206ENST00000553938 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
SPTB-206ENST00000553938 MSH5O43196 834 aa16.91■□□□□ 0.3
SPTB-206ENST00000553938 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
SPTB-206ENST00000553938 NEFLP07196 543 aa16.9■□□□□ 0.3
SPTB-206ENST00000553938 ZNF644Q9H582 1327 aaPredicted RBP16.9■□□□□ 0.3
SPTB-206ENST00000553938 MYOM3Q5VTT5 1437 aa16.89■□□□□ 0.29
SPTB-206ENST00000553938 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
SPTB-206ENST00000553938 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
SPTB-206ENST00000553938 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
SPTB-206ENST00000553938 EFCAB5A4FU69 1503 aa16.87■□□□□ 0.29
SPTB-206ENST00000553938 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
SPTB-206ENST00000553938 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
SPTB-206ENST00000553938 L3MBTL2Q969R5 705 aa16.87■□□□□ 0.29
SPTB-206ENST00000553938 NBPF8Q3BBV2 869 aa16.85■□□□□ 0.29
SPTB-206ENST00000553938 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
SPTB-206ENST00000553938 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.29
SPTB-206ENST00000553938 DEKP35659 375 aaKnown RBP16.82■□□□□ 0.28
SPTB-206ENST00000553938 CUL7Q14999 1698 aa16.82■□□□□ 0.28
SPTB-206ENST00000553938 SAMD9Q5K651 1589 aa16.82■□□□□ 0.28
SPTB-206ENST00000553938 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
SPTB-206ENST00000553938 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
SPTB-206ENST00000553938 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms