RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
SPTB-206ENST00000553938 SHROOM4Q9ULL8 1493 aa21.59■■□□□ 1.05
SPTB-206ENST00000553938 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
SPTB-206ENST00000553938 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
SPTB-206ENST00000553938 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
SPTB-206ENST00000553938 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
SPTB-206ENST00000553938 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
SPTB-206ENST00000553938 PCGF6Q9BYE7 350 aa20.25■□□□□ 0.83
SPTB-206ENST00000553938 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
SPTB-206ENST00000553938 PPARGC1BQ86YN6 1023 aaKnown RBP20.2■□□□□ 0.82
SPTB-206ENST00000553938 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
SPTB-206ENST00000553938 HRCP23327 699 aa20.12■□□□□ 0.81
SPTB-206ENST00000553938 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
SPTB-206ENST00000553938 EHMT2Q96KQ7 1210 aa19.84■□□□□ 0.77
SPTB-206ENST00000553938 SLC24A1O60721 1099 aa19.74■□□□□ 0.75
SPTB-206ENST00000553938 FAM9AQ8IZU1 332 aaPredicted RBP19.68■□□□□ 0.74
SPTB-206ENST00000553938 SCRIBQ14160 1630 aa19.58■□□□□ 0.73
SPTB-206ENST00000553938 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
SPTB-206ENST00000553938 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
SPTB-206ENST00000553938 ABCC9O60706 1549 aa19.45■□□□□ 0.7
SPTB-206ENST00000553938 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
SPTB-206ENST00000553938 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
SPTB-206ENST00000553938 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
SPTB-206ENST00000553938 MYT1Q01538 1121 aa19.35■□□□□ 0.69
SPTB-206ENST00000553938 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
SPTB-206ENST00000553938 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
SPTB-206ENST00000553938 TTBK1Q5TCY1 1321 aaPredicted RBP19.18■□□□□ 0.66
SPTB-206ENST00000553938 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
SPTB-206ENST00000553938 WIZO95785 1651 aa19.07■□□□□ 0.64
SPTB-206ENST00000553938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.02■□□□□ 0.64
SPTB-206ENST00000553938 ABCC8Q09428 1581 aa18.85■□□□□ 0.61
SPTB-206ENST00000553938 ZEB1P37275 1124 aaPredicted RBP18.78■□□□□ 0.6
SPTB-206ENST00000553938 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
SPTB-206ENST00000553938 CCER1Q8TC90 406 aaPredicted RBP18.75■□□□□ 0.59
SPTB-206ENST00000553938 NACADO15069 1562 aa18.72■□□□□ 0.59
SPTB-206ENST00000553938 SOGA1O94964 1423 aa18.7■□□□□ 0.58
SPTB-206ENST00000553938 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
SPTB-206ENST00000553938 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
SPTB-206ENST00000553938 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
SPTB-206ENST00000553938 PRKCSHP14314 528 aaPredicted RBP18.65■□□□□ 0.58
SPTB-206ENST00000553938 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPTB-206ENST00000553938 NEUROD1Q13562 356 aa18.61■□□□□ 0.57
SPTB-206ENST00000553938 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
SPTB-206ENST00000553938 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
SPTB-206ENST00000553938 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
SPTB-206ENST00000553938 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
SPTB-206ENST00000553938 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
SPTB-206ENST00000553938 DIEXFQ68CQ4 756 aaKnown RBP18.47■□□□□ 0.55
SPTB-206ENST00000553938 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
SPTB-206ENST00000553938 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
SPTB-206ENST00000553938 HNRNPUL2Q1KMD3 747 aaKnown RBP18.43■□□□□ 0.54
SPTB-206ENST00000553938 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
SPTB-206ENST00000553938 ACIN1Q9UKV3 1341 aaKnown RBP18.42■□□□□ 0.54
SPTB-206ENST00000553938 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
SPTB-206ENST00000553938 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
SPTB-206ENST00000553938 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
SPTB-206ENST00000553938 WRNQ14191 1432 aaPredicted RBP eCLIP18.31■□□□□ 0.52
SPTB-206ENST00000553938 TNIKQ9UKE5 1360 aa18.31■□□□□ 0.52
SPTB-206ENST00000553938 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
SPTB-206ENST00000553938 MIER1Q8N108 512 aa18.2■□□□□ 0.5
SPTB-206ENST00000553938 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
SPTB-206ENST00000553938 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
SPTB-206ENST00000553938 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
SPTB-206ENST00000553938 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
SPTB-206ENST00000553938 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
SPTB-206ENST00000553938 CLIP1P30622 1438 aa18.11■□□□□ 0.49
SPTB-206ENST00000553938 DAXXQ9UER7 740 aaPredicted RBP18.08■□□□□ 0.49
SPTB-206ENST00000553938 ERICH6Q7L0X2 663 aa18.03■□□□□ 0.48
SPTB-206ENST00000553938 EEA1Q15075 1411 aa18.02■□□□□ 0.48
SPTB-206ENST00000553938 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
SPTB-206ENST00000553938 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
SPTB-206ENST00000553938 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
SPTB-206ENST00000553938 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
SPTB-206ENST00000553938 KIF21BO75037 1637 aa17.96■□□□□ 0.46
SPTB-206ENST00000553938 ITGAEP38570 1179 aa17.95■□□□□ 0.46
SPTB-206ENST00000553938 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
SPTB-206ENST00000553938 APLP2Q06481 763 aa17.94■□□□□ 0.46
SPTB-206ENST00000553938 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
SPTB-206ENST00000553938 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
SPTB-206ENST00000553938 ARAP1Q96P48 1450 aa17.83■□□□□ 0.44
SPTB-206ENST00000553938 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
SPTB-206ENST00000553938 DHX57Q6P158 1386 aaKnown RBP17.81■□□□□ 0.44
SPTB-206ENST00000553938 TOP2BQ02880 1626 aa17.77■□□□□ 0.44
SPTB-206ENST00000553938 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.44
SPTB-206ENST00000553938 CUX1P39880 1505 aa17.73■□□□□ 0.43
SPTB-206ENST00000553938 PRXQ9BXM0 1461 aa17.71■□□□□ 0.43
SPTB-206ENST00000553938 P3H3Q8IVL6 736 aa17.7■□□□□ 0.42
SPTB-206ENST00000553938 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
SPTB-206ENST00000553938 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
SPTB-206ENST00000553938 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
SPTB-206ENST00000553938 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
SPTB-206ENST00000553938 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
SPTB-206ENST00000553938 SUPT16HQ9Y5B9 1047 aaKnown RBP17.58■□□□□ 0.41
SPTB-206ENST00000553938 CCNB3Q8WWL7 1395 aa17.56■□□□□ 0.4
SPTB-206ENST00000553938 BCANQ96GW7 911 aa17.56■□□□□ 0.4
SPTB-206ENST00000553938 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
SPTB-206ENST00000553938 RAB3GAP2Q9H2M9 1393 aa17.55■□□□□ 0.4
SPTB-206ENST00000553938 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
SPTB-206ENST00000553938 KIF27Q86VH2 1401 aa17.54■□□□□ 0.4
SPTB-206ENST00000553938 RRBP1Q9P2E9 1410 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms