RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
SMARCC2-214ENST00000552674 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
SMARCC2-214ENST00000552674 KIF21BO75037 1637 aa13.05□□□□□ -0.32
SMARCC2-214ENST00000552674 ZNF326Q5BKZ1 582 aaKnown RBP13.05□□□□□ -0.32
SMARCC2-214ENST00000552674 RTL5Q5HYW3 569 aaPredicted RBP13.04□□□□□ -0.32
SMARCC2-214ENST00000552674 SETD5Q9C0A6 1442 aa13.03□□□□□ -0.32
SMARCC2-214ENST00000552674 NBR1Q14596 966 aa13.03□□□□□ -0.32
SMARCC2-214ENST00000552674 SENP3-EIF4A1A0A087X0R7 540 aa13.02□□□□□ -0.32
SMARCC2-214ENST00000552674 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
SMARCC2-214ENST00000552674 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
SMARCC2-214ENST00000552674 CCER2I3L3R5 266 aa13.01□□□□□ -0.33
SMARCC2-214ENST00000552674 RRP7BPQ9NSQ0 103 aa12.99□□□□□ -0.33
SMARCC2-214ENST00000552674 PPP1R15AO75807 674 aaPredicted RBP12.99□□□□□ -0.33
SMARCC2-214ENST00000552674 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
SMARCC2-214ENST00000552674 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
SMARCC2-214ENST00000552674 NPM2Q86SE8 214 aaKnown RBP12.95□□□□□ -0.34
SMARCC2-214ENST00000552674 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 25.7
SMARCC2-214ENST00000552674 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
SMARCC2-214ENST00000552674 ANP32AP39687 249 aaKnown RBP12.93□□□□□ -0.34
SMARCC2-214ENST00000552674 TIMELESSQ9UNS1 1208 aa12.93□□□□□ -0.34
SMARCC2-214ENST00000552674 ATAD2BQ9ULI0 1458 aa12.93□□□□□ -0.34
SMARCC2-214ENST00000552674 CUX2O14529 1486 aa12.92□□□□□ -0.34
SMARCC2-214ENST00000552674 CCDC136Q96JN2 1154 aa12.92□□□□□ -0.34
SMARCC2-214ENST00000552674 CARMIL1Q5VZK9 1371 aa12.91□□□□□ -0.34
SMARCC2-214ENST00000552674 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
SMARCC2-214ENST00000552674 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
SMARCC2-214ENST00000552674 RRBP1Q9P2E9 1410 aaKnown RBP12.89□□□□□ -0.35
SMARCC2-214ENST00000552674 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
SMARCC2-214ENST00000552674 HSPA5P11021 654 aaKnown RBP12.88□□□□□ -0.35
SMARCC2-214ENST00000552674 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
SMARCC2-214ENST00000552674 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
SMARCC2-214ENST00000552674 PHLDB1Q86UU1 1377 aa12.85□□□□□ -0.35
SMARCC2-214ENST00000552674 FOXD1Q16676 465 aa12.84□□□□□ -0.35
SMARCC2-214ENST00000552674 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
SMARCC2-214ENST00000552674 ARHGAP35Q9NRY4 1499 aa12.83□□□□□ -0.36
SMARCC2-214ENST00000552674 DEKP35659 375 aaKnown RBP12.83□□□□□ -0.36
SMARCC2-214ENST00000552674 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
SMARCC2-214ENST00000552674 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
SMARCC2-214ENST00000552674 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
SMARCC2-214ENST00000552674 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
SMARCC2-214ENST00000552674 ZNF777Q9ULD5 760 aaPredicted RBP12.82□□□□□ -0.36
SMARCC2-214ENST00000552674 NOP58Q9Y2X3 529 aaKnown RBP12.8□□□□□ -0.36
SMARCC2-214ENST00000552674 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
SMARCC2-214ENST00000552674 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
SMARCC2-214ENST00000552674 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
SMARCC2-214ENST00000552674 MSH5O43196 834 aa12.77□□□□□ -0.36
SMARCC2-214ENST00000552674 IGF1RP08069 1367 aa12.77□□□□□ -0.37
SMARCC2-214ENST00000552674 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
SMARCC2-214ENST00000552674 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
SMARCC2-214ENST00000552674 LRRC9Q6ZRR7 1453 aa12.74□□□□□ -0.37
SMARCC2-214ENST00000552674 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
SMARCC2-214ENST00000552674 L3MBTL2Q969R5 705 aa12.74□□□□□ -0.37
SMARCC2-214ENST00000552674 TOP2BQ02880 1626 aa12.74□□□□□ -0.37
SMARCC2-214ENST00000552674 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
SMARCC2-214ENST00000552674 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
SMARCC2-214ENST00000552674 CCDC184Q52MB2 194 aa12.71□□□□□ -0.38
SMARCC2-214ENST00000552674 LAS1LQ9Y4W2 734 aaKnown RBP12.71□□□□□ -0.38
SMARCC2-214ENST00000552674 MPHOSPH9Q99550 1183 aa12.7□□□□□ -0.38
SMARCC2-214ENST00000552674 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
SMARCC2-214ENST00000552674 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
SMARCC2-214ENST00000552674 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
SMARCC2-214ENST00000552674 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
SMARCC2-214ENST00000552674 MAPKBP1O60336 1514 aa12.67□□□□□ -0.38
SMARCC2-214ENST00000552674 FMN1Q68DA7 1419 aa12.67□□□□□ -0.38
SMARCC2-214ENST00000552674 CUX1P39880 1505 aa12.67□□□□□ -0.38
SMARCC2-214ENST00000552674 FBLN2P98095 1184 aa12.66□□□□□ -0.38
SMARCC2-214ENST00000552674 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
SMARCC2-214ENST00000552674 NEFMP07197 916 aa12.63□□□□□ -0.39
SMARCC2-214ENST00000552674 FGD6Q6ZV73 1430 aa12.63□□□□□ -0.39
SMARCC2-214ENST00000552674 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
SMARCC2-214ENST00000552674 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
SMARCC2-214ENST00000552674 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
SMARCC2-214ENST00000552674 EIF5BO60841 1220 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-214ENST00000552674 CARD11Q9BXL7 1154 aa12.62□□□□□ -0.39
SMARCC2-214ENST00000552674 TDRD9Q8NDG6 1382 aaKnown RBP12.62□□□□□ -0.39
SMARCC2-214ENST00000552674 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
SMARCC2-214ENST00000552674 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
SMARCC2-214ENST00000552674 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
SMARCC2-214ENST00000552674 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
SMARCC2-214ENST00000552674 CADPSQ9ULU8 1353 aa12.6□□□□□ -0.39
SMARCC2-214ENST00000552674 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
SMARCC2-214ENST00000552674 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
SMARCC2-214ENST00000552674 CCDC7Q96M83 1385 aa12.57□□□□□ -0.4
SMARCC2-214ENST00000552674 CFDP1Q9UEE9 299 aaPredicted RBP12.57□□□□□ -0.4
SMARCC2-214ENST00000552674 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
SMARCC2-214ENST00000552674 KIF7Q2M1P5 1343 aa12.56□□□□□ -0.4
SMARCC2-214ENST00000552674 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
SMARCC2-214ENST00000552674 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
SMARCC2-214ENST00000552674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.43e-7■■■□□ 19.2
SMARCC2-214ENST00000552674 CFTRP13569 1480 aa12.54□□□□□ -0.4
SMARCC2-214ENST00000552674 PKD2Q13563 968 aa12.54□□□□□ -0.4
SMARCC2-214ENST00000552674 CASKIN1Q8WXD9 1431 aa12.53□□□□□ -0.4
SMARCC2-214ENST00000552674 AKNAQ7Z591 1439 aa12.53□□□□□ -0.4
SMARCC2-214ENST00000552674 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.4
SMARCC2-214ENST00000552674 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.4
SMARCC2-214ENST00000552674 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.4
SMARCC2-214ENST00000552674 TSPY4P0CV99 314 aa12.52□□□□□ -0.41
SMARCC2-214ENST00000552674 TSPY10P0CW01 314 aa12.52□□□□□ -0.41
SMARCC2-214ENST00000552674 DCAF11Q8TEB1 546 aa12.52□□□□□ -0.41
SMARCC2-214ENST00000552674 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms