RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
PRIM1-208ENST00000552590 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
PRIM1-208ENST00000552590 EVX2Q03828 476 aa16.88■□□□□ 0.29
PRIM1-208ENST00000552590 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
PRIM1-208ENST00000552590 CHD1O14646 1710 aa16.84■□□□□ 0.29
PRIM1-208ENST00000552590 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
PRIM1-208ENST00000552590 FBLN2P98095 1184 aa16.81■□□□□ 0.28
PRIM1-208ENST00000552590 CFTRP13569 1480 aa16.8■□□□□ 0.28
PRIM1-208ENST00000552590 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
PRIM1-208ENST00000552590 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
PRIM1-208ENST00000552590 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.268e-8■■■■□ 20.3
PRIM1-208ENST00000552590 WIZO95785 1651 aa16.67■□□□□ 0.26
PRIM1-208ENST00000552590 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
PRIM1-208ENST00000552590 CLASP1Q7Z460 1538 aa16.61■□□□□ 0.25
PRIM1-208ENST00000552590 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
PRIM1-208ENST00000552590 LHX8Q68G74 356 aa16.58■□□□□ 0.24
PRIM1-208ENST00000552590 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
PRIM1-208ENST00000552590 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.24
PRIM1-208ENST00000552590 PRKAR2AP13861 404 aaKnown RBP16.52■□□□□ 0.23
PRIM1-208ENST00000552590 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
PRIM1-208ENST00000552590 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
PRIM1-208ENST00000552590 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
PRIM1-208ENST00000552590 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
PRIM1-208ENST00000552590 GABBR2O75899 941 aa16.47■□□□□ 0.23
PRIM1-208ENST00000552590 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
PRIM1-208ENST00000552590 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
PRIM1-208ENST00000552590 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
PRIM1-208ENST00000552590 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
PRIM1-208ENST00000552590 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
PRIM1-208ENST00000552590 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
PRIM1-208ENST00000552590 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
PRIM1-208ENST00000552590 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
PRIM1-208ENST00000552590 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
PRIM1-208ENST00000552590 POLA1P09884 1462 aaPredicted RBP16.37■□□□□ 0.21
PRIM1-208ENST00000552590 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
PRIM1-208ENST00000552590 CLEC11AQ9Y240 323 aa16.36■□□□□ 0.21
PRIM1-208ENST00000552590 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
PRIM1-208ENST00000552590 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
PRIM1-208ENST00000552590 FBXO41Q8TF61 875 aa16.34■□□□□ 0.21
PRIM1-208ENST00000552590 TOP2AP11388 1531 aaKnown RBP16.33■□□□□ 0.21
PRIM1-208ENST00000552590 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
PRIM1-208ENST00000552590 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
PRIM1-208ENST00000552590 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
PRIM1-208ENST00000552590 PLSCR2Q9NRY7 297 aa16.29■□□□□ 0.2
PRIM1-208ENST00000552590 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
PRIM1-208ENST00000552590 SOGA1O94964 1423 aa16.28■□□□□ 0.2
PRIM1-208ENST00000552590 KDM6BO15054 1643 aa16.26■□□□□ 0.19
PRIM1-208ENST00000552590 LMTK3Q96Q04 1460 aa16.24■□□□□ 0.19
PRIM1-208ENST00000552590 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
PRIM1-208ENST00000552590 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.18
PRIM1-208ENST00000552590 ADGRL1O94910 1474 aa16.2■□□□□ 0.18
PRIM1-208ENST00000552590 ABCC10Q5T3U5 1492 aa16.2■□□□□ 0.18
PRIM1-208ENST00000552590 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
PRIM1-208ENST00000552590 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
PRIM1-208ENST00000552590 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
PRIM1-208ENST00000552590 SOCS7O14512 581 aa16.13■□□□□ 0.17
PRIM1-208ENST00000552590 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
PRIM1-208ENST00000552590 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
PRIM1-208ENST00000552590 DIP2BQ9P265 1576 aa16.12■□□□□ 0.17
PRIM1-208ENST00000552590 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
PRIM1-208ENST00000552590 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
PRIM1-208ENST00000552590 ILDR2Q71H61 639 aa16.1■□□□□ 0.17
PRIM1-208ENST00000552590 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
PRIM1-208ENST00000552590 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
PRIM1-208ENST00000552590 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
PRIM1-208ENST00000552590 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
PRIM1-208ENST00000552590 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRIM1-208ENST00000552590 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
PRIM1-208ENST00000552590 SHROOM2Q13796 1616 aa16.03■□□□□ 0.16
PRIM1-208ENST00000552590 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
PRIM1-208ENST00000552590 NUP160Q12769 1436 aa16■□□□□ 0.15
PRIM1-208ENST00000552590 PRR29P0C7W0 189 aa15.97■□□□□ 0.15
PRIM1-208ENST00000552590 PRG4Q92954 1404 aaPredicted RBP15.97■□□□□ 0.15
PRIM1-208ENST00000552590 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
PRIM1-208ENST00000552590 DISP3Q9P2K9 1392 aa15.96■□□□□ 0.15
PRIM1-208ENST00000552590 CUX1P39880 1505 aa15.95■□□□□ 0.14
PRIM1-208ENST00000552590 CD44P16070 742 aaKnown RBP15.95■□□□□ 0.14
PRIM1-208ENST00000552590 CLCN6P51797 869 aa15.94■□□□□ 0.14
PRIM1-208ENST00000552590 ADCY10Q96PN6 1610 aa15.92■□□□□ 0.14
PRIM1-208ENST00000552590 ABCA5Q8WWZ7 1642 aa15.91■□□□□ 0.14
PRIM1-208ENST00000552590 ZBTB22O15209 634 aa15.9■□□□□ 0.14
PRIM1-208ENST00000552590 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
PRIM1-208ENST00000552590 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
PRIM1-208ENST00000552590 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
PRIM1-208ENST00000552590 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
PRIM1-208ENST00000552590 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
PRIM1-208ENST00000552590 PPRC1Q5VV67 1664 aaKnown RBP15.84■□□□□ 0.13
PRIM1-208ENST00000552590 FARP1Q9Y4F1 1045 aaPredicted RBP15.82■□□□□ 0.12
PRIM1-208ENST00000552590 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
PRIM1-208ENST00000552590 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
PRIM1-208ENST00000552590 GLI2P10070 1586 aa15.71■□□□□ 0.11
PRIM1-208ENST00000552590 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
PRIM1-208ENST00000552590 OTUD5Q96G74 571 aa15.69■□□□□ 0.1
PRIM1-208ENST00000552590 ASXL2Q76L83 1435 aa15.68■□□□□ 0.1
PRIM1-208ENST00000552590 RUSC2Q8N2Y8 1516 aa15.68■□□□□ 0.1
PRIM1-208ENST00000552590 SPATA31D1Q6ZQQ2 1576 aa15.67■□□□□ 0.1
PRIM1-208ENST00000552590 POTEMA6NI47 508 aa15.65■□□□□ 0.1
PRIM1-208ENST00000552590 ZNF579Q8NAF0 562 aaKnown RBP15.65■□□□□ 0.1
PRIM1-208ENST00000552590 PLB1Q6P1J6 1458 aa15.65■□□□□ 0.1
PRIM1-208ENST00000552590 TTBK1Q5TCY1 1321 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms