RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
CACNB3-219ENST00000551544 LRRC9Q6ZRR7 1453 aa18.96■□□□□ 0.63
CACNB3-219ENST00000551544 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
CACNB3-219ENST00000551544 MAP3K1Q13233 1512 aa18.95■□□□□ 0.62
CACNB3-219ENST00000551544 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
CACNB3-219ENST00000551544 PHLDB1Q86UU1 1377 aa18.94■□□□□ 0.62
CACNB3-219ENST00000551544 NESP48681 1621 aa18.91■□□□□ 0.62
CACNB3-219ENST00000551544 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
CACNB3-219ENST00000551544 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
CACNB3-219ENST00000551544 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
CACNB3-219ENST00000551544 TOPBP1Q92547 1522 aa18.89■□□□□ 0.62
CACNB3-219ENST00000551544 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.61
CACNB3-219ENST00000551544 SETD5Q9C0A6 1442 aa18.89■□□□□ 0.61
CACNB3-219ENST00000551544 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
CACNB3-219ENST00000551544 MAPKBP1O60336 1514 aa18.85■□□□□ 0.61
CACNB3-219ENST00000551544 CFAP43Q8NDM7 1665 aa18.82■□□□□ 0.6
CACNB3-219ENST00000551544 SIN3AQ96ST3 1273 aa18.8■□□□□ 0.6
CACNB3-219ENST00000551544 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
CACNB3-219ENST00000551544 CASKIN1Q8WXD9 1431 aa18.78■□□□□ 0.6
CACNB3-219ENST00000551544 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
CACNB3-219ENST00000551544 CUL7Q14999 1698 aa18.76■□□□□ 0.59
CACNB3-219ENST00000551544 TDRD9Q8NDG6 1382 aaKnown RBP18.76■□□□□ 0.59
CACNB3-219ENST00000551544 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
CACNB3-219ENST00000551544 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
CACNB3-219ENST00000551544 CTTNBP2Q8WZ74 1663 aa18.72■□□□□ 0.59
CACNB3-219ENST00000551544 FMN1Q68DA7 1419 aa18.72■□□□□ 0.59
CACNB3-219ENST00000551544 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
CACNB3-219ENST00000551544 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
CACNB3-219ENST00000551544 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
CACNB3-219ENST00000551544 FGD6Q6ZV73 1430 aa18.66■□□□□ 0.58
CACNB3-219ENST00000551544 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
CACNB3-219ENST00000551544 SNAPC4Q5SXM2 1469 aa18.66■□□□□ 0.58
CACNB3-219ENST00000551544 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
CACNB3-219ENST00000551544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNB3-219ENST00000551544 KCNH8Q96L42 1107 aa18.65■□□□□ 0.58
CACNB3-219ENST00000551544 DDX10Q13206 875 aaKnown RBP18.65■□□□□ 0.58
CACNB3-219ENST00000551544 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
CACNB3-219ENST00000551544 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
CACNB3-219ENST00000551544 ABCA5Q8WWZ7 1642 aa18.62■□□□□ 0.57
CACNB3-219ENST00000551544 TIMELESSQ9UNS1 1208 aa18.61■□□□□ 0.57
CACNB3-219ENST00000551544 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
CACNB3-219ENST00000551544 SAMD9Q5K651 1589 aa18.58■□□□□ 0.57
CACNB3-219ENST00000551544 PTPRKQ15262 1439 aa18.58■□□□□ 0.56
CACNB3-219ENST00000551544 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.56
CACNB3-219ENST00000551544 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
CACNB3-219ENST00000551544 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
CACNB3-219ENST00000551544 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
CACNB3-219ENST00000551544 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
CACNB3-219ENST00000551544 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
CACNB3-219ENST00000551544 LRRIQ1Q96JM4 1722 aa18.54■□□□□ 0.56
CACNB3-219ENST00000551544 HFM1A2PYH4 1435 aa18.54■□□□□ 0.56
CACNB3-219ENST00000551544 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
CACNB3-219ENST00000551544 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
CACNB3-219ENST00000551544 PTPN23Q9H3S7 1636 aa18.5■□□□□ 0.55
CACNB3-219ENST00000551544 NAIPQ13075 1403 aa18.49■□□□□ 0.55
CACNB3-219ENST00000551544 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
CACNB3-219ENST00000551544 EHBP1L1Q8N3D4 1523 aa18.48■□□□□ 0.55
CACNB3-219ENST00000551544 CHIC2Q9UKJ5 165 aa18.48■□□□□ 0.55
CACNB3-219ENST00000551544 RRP7BPQ9NSQ0 103 aa18.47■□□□□ 0.55
CACNB3-219ENST00000551544 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
CACNB3-219ENST00000551544 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
CACNB3-219ENST00000551544 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.55
CACNB3-219ENST00000551544 MAGI3Q5TCQ9 1506 aa18.45■□□□□ 0.54
CACNB3-219ENST00000551544 UGGT2Q9NYU1 1516 aa18.43■□□□□ 0.54
CACNB3-219ENST00000551544 ANP32CO43423 234 aa18.43■□□□□ 0.54
CACNB3-219ENST00000551544 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
CACNB3-219ENST00000551544 ARHGEF11O15085 1522 aa18.39■□□□□ 0.53
CACNB3-219ENST00000551544 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
CACNB3-219ENST00000551544 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
CACNB3-219ENST00000551544 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
CACNB3-219ENST00000551544 EPRSP07814 1512 aaKnown RBP18.37■□□□□ 0.53
CACNB3-219ENST00000551544 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
CACNB3-219ENST00000551544 CDK13Q14004 1512 aaKnown RBP18.36■□□□□ 0.53
CACNB3-219ENST00000551544 BCANQ96GW7 911 aa18.34■□□□□ 0.53
CACNB3-219ENST00000551544 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
CACNB3-219ENST00000551544 TCOF1Q13428 1488 aaKnown RBP18.34■□□□□ 0.53
CACNB3-219ENST00000551544 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
CACNB3-219ENST00000551544 FKBP8Q14318 412 aa18.31■□□□□ 0.52
CACNB3-219ENST00000551544 KDM5BQ9UGL1 1544 aa18.29■□□□□ 0.52
CACNB3-219ENST00000551544 WDR62O43379 1518 aa18.29■□□□□ 0.52
CACNB3-219ENST00000551544 FOXD1Q16676 465 aa18.28■□□□□ 0.52
CACNB3-219ENST00000551544 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
CACNB3-219ENST00000551544 KDM6BO15054 1643 aa18.28■□□□□ 0.52
CACNB3-219ENST00000551544 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
CACNB3-219ENST00000551544 MIA2Q96PC5 1412 aa18.28■□□□□ 0.52
CACNB3-219ENST00000551544 DENND4BO75064 1496 aaPredicted RBP18.27■□□□□ 0.52
CACNB3-219ENST00000551544 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.51
CACNB3-219ENST00000551544 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
CACNB3-219ENST00000551544 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
CACNB3-219ENST00000551544 TSHZ2Q9NRE2 1034 aa18.25■□□□□ 0.51
CACNB3-219ENST00000551544 NEFLP07196 543 aa18.23■□□□□ 0.51
CACNB3-219ENST00000551544 ZNF644Q9H582 1327 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-219ENST00000551544 L3MBTL2Q969R5 705 aa18.22■□□□□ 0.51
CACNB3-219ENST00000551544 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
CACNB3-219ENST00000551544 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
CACNB3-219ENST00000551544 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
CACNB3-219ENST00000551544 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
CACNB3-219ENST00000551544 DAPK1P53355 1430 aa18.19■□□□□ 0.5
CACNB3-219ENST00000551544 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
CACNB3-219ENST00000551544 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms