RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
CNOT2-229ENST00000551179 CUL7Q14999 1698 aa15.61■□□□□ 0.09
CNOT2-229ENST00000551179 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
CNOT2-229ENST00000551179 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
CNOT2-229ENST00000551179 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
CNOT2-229ENST00000551179 RANGAP1P46060 587 aaPredicted RBP15.58■□□□□ 0.08
CNOT2-229ENST00000551179 IGF1RP08069 1367 aa15.57■□□□□ 0.08
CNOT2-229ENST00000551179 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
CNOT2-229ENST00000551179 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
CNOT2-229ENST00000551179 TTBK1Q5TCY1 1321 aaPredicted RBP15.54■□□□□ 0.08
CNOT2-229ENST00000551179 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
CNOT2-229ENST00000551179 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
CNOT2-229ENST00000551179 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
CNOT2-229ENST00000551179 MRC2Q9UBG0 1479 aa15.48■□□□□ 0.07
CNOT2-229ENST00000551179 ARHGAP35Q9NRY4 1499 aa15.47■□□□□ 0.07
CNOT2-229ENST00000551179 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
CNOT2-229ENST00000551179 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
CNOT2-229ENST00000551179 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
CNOT2-229ENST00000551179 EFCAB5A4FU69 1503 aa15.47■□□□□ 0.07
CNOT2-229ENST00000551179 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
CNOT2-229ENST00000551179 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
CNOT2-229ENST00000551179 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
CNOT2-229ENST00000551179 CTTNBP2Q8WZ74 1663 aa15.44■□□□□ 0.06
CNOT2-229ENST00000551179 ZBTB22O15209 634 aa15.4■□□□□ 0.06
CNOT2-229ENST00000551179 MAP3K1Q13233 1512 aa15.39■□□□□ 0.05
CNOT2-229ENST00000551179 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
CNOT2-229ENST00000551179 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
CNOT2-229ENST00000551179 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
CNOT2-229ENST00000551179 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
CNOT2-229ENST00000551179 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
CNOT2-229ENST00000551179 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
CNOT2-229ENST00000551179 WDR62O43379 1518 aa15.34■□□□□ 0.05
CNOT2-229ENST00000551179 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
CNOT2-229ENST00000551179 TIAM1Q13009 1591 aa15.33■□□□□ 0.05
CNOT2-229ENST00000551179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.33■□□□□ 0.04
CNOT2-229ENST00000551179 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
CNOT2-229ENST00000551179 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.04
CNOT2-229ENST00000551179 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
CNOT2-229ENST00000551179 CFAP43Q8NDM7 1665 aa15.31■□□□□ 0.04
CNOT2-229ENST00000551179 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
CNOT2-229ENST00000551179 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
CNOT2-229ENST00000551179 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
CNOT2-229ENST00000551179 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
CNOT2-229ENST00000551179 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
CNOT2-229ENST00000551179 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
CNOT2-229ENST00000551179 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
CNOT2-229ENST00000551179 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
CNOT2-229ENST00000551179 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
CNOT2-229ENST00000551179 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
CNOT2-229ENST00000551179 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
CNOT2-229ENST00000551179 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
CNOT2-229ENST00000551179 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
CNOT2-229ENST00000551179 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
CNOT2-229ENST00000551179 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
CNOT2-229ENST00000551179 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
CNOT2-229ENST00000551179 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
CNOT2-229ENST00000551179 CCDC18Q5T9S5 1454 aa15.16■□□□□ 0.02
CNOT2-229ENST00000551179 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
CNOT2-229ENST00000551179 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
CNOT2-229ENST00000551179 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
CNOT2-229ENST00000551179 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
CNOT2-229ENST00000551179 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
CNOT2-229ENST00000551179 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
CNOT2-229ENST00000551179 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
CNOT2-229ENST00000551179 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
CNOT2-229ENST00000551179 POTEHQ6S545 545 aa15.1■□□□□ 0.01
CNOT2-229ENST00000551179 UGGT2Q9NYU1 1516 aa15.1■□□□□ 0.01
CNOT2-229ENST00000551179 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
CNOT2-229ENST00000551179 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
CNOT2-229ENST00000551179 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0
CNOT2-229ENST00000551179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 03e-6■■□□□ 12.8
CNOT2-229ENST00000551179 SYNJ2O15056 1496 aa15.07■□□□□ 0
CNOT2-229ENST00000551179 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
CNOT2-229ENST00000551179 PHLDB1Q86UU1 1377 aa15.05■□□□□ -0
CNOT2-229ENST00000551179 KIAA0556O60303 1618 aa15.03■□□□□ -0
CNOT2-229ENST00000551179 ITGAEP38570 1179 aa15.03■□□□□ -0
CNOT2-229ENST00000551179 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
CNOT2-229ENST00000551179 FGD6Q6ZV73 1430 aa15□□□□□ -0.01
CNOT2-229ENST00000551179 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
CNOT2-229ENST00000551179 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
CNOT2-229ENST00000551179 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
CNOT2-229ENST00000551179 CAPN15O75808 1086 aa14.99□□□□□ -0.01
CNOT2-229ENST00000551179 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
CNOT2-229ENST00000551179 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
CNOT2-229ENST00000551179 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
CNOT2-229ENST00000551179 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
CNOT2-229ENST00000551179 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
CNOT2-229ENST00000551179 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
CNOT2-229ENST00000551179 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
CNOT2-229ENST00000551179 FBLN2P98095 1184 aa14.94□□□□□ -0.02
CNOT2-229ENST00000551179 LRRIQ1Q96JM4 1722 aa14.94□□□□□ -0.02
CNOT2-229ENST00000551179 NUP160Q12769 1436 aa14.93□□□□□ -0.02
CNOT2-229ENST00000551179 ZNF316A6NFI3 1004 aaPredicted RBP14.93□□□□□ -0.02
CNOT2-229ENST00000551179 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
CNOT2-229ENST00000551179 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
CNOT2-229ENST00000551179 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
CNOT2-229ENST00000551179 PTPN23Q9H3S7 1636 aa14.91□□□□□ -0.02
CNOT2-229ENST00000551179 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
CNOT2-229ENST00000551179 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
CNOT2-229ENST00000551179 MIA2Q96PC5 1412 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms