RNA–Protein interactions for RNA: ENST00000551043.5

CNOT2-227, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-227ENST00000551043 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
CNOT2-227ENST00000551043 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
CNOT2-227ENST00000551043 MAP3K1Q13233 1512 aa28.07■■■□□ 2.08
CNOT2-227ENST00000551043 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
CNOT2-227ENST00000551043 LRRC9Q6ZRR7 1453 aa28.05■■■□□ 2.08
CNOT2-227ENST00000551043 FHOD3Q2V2M9 1422 aa28.05■■■□□ 2.08
CNOT2-227ENST00000551043 TDRD9Q8NDG6 1382 aaKnown RBP28.03■■■□□ 2.08
CNOT2-227ENST00000551043 PHLDB1Q86UU1 1377 aa28■■■□□ 2.07
CNOT2-227ENST00000551043 PCF11O94913 1555 aaKnown RBP27.99■■■□□ 2.07
CNOT2-227ENST00000551043 CUL7Q14999 1698 aa27.98■■■□□ 2.07
CNOT2-227ENST00000551043 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
CNOT2-227ENST00000551043 CENPBP07199 599 aaPredicted RBP27.97■■■□□ 2.07
CNOT2-227ENST00000551043 MIER1Q8N108 512 aa27.96■■■□□ 2.07
CNOT2-227ENST00000551043 FAM50AQ14320 339 aaKnown RBP27.93■■■□□ 2.06
CNOT2-227ENST00000551043 RAB3GAP2Q9H2M9 1393 aa27.91■■■□□ 2.06
CNOT2-227ENST00000551043 WDR97A6NE52 1622 aa27.9■■■□□ 2.06
CNOT2-227ENST00000551043 EFCAB5A4FU69 1503 aa27.9■■■□□ 2.06
CNOT2-227ENST00000551043 GAPVD1Q14C86 1478 aa27.88■■■□□ 2.05
CNOT2-227ENST00000551043 CFAP43Q8NDM7 1665 aa27.87■■■□□ 2.05
CNOT2-227ENST00000551043 CTTNBP2Q8WZ74 1663 aa27.87■■■□□ 2.05
CNOT2-227ENST00000551043 CASKIN1Q8WXD9 1431 aa27.87■■■□□ 2.05
CNOT2-227ENST00000551043 FYCO1Q9BQS8 1478 aa27.86■■■□□ 2.05
CNOT2-227ENST00000551043 YTHDC1Q96MU7 727 aaKnown RBP27.85■■■□□ 2.05
CNOT2-227ENST00000551043 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
CNOT2-227ENST00000551043 KIF21AQ7Z4S6 1674 aa27.82■■■□□ 2.04
CNOT2-227ENST00000551043 SETD5Q9C0A6 1442 aa27.81■■■□□ 2.04
CNOT2-227ENST00000551043 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.04
CNOT2-227ENST00000551043 FMN1Q68DA7 1419 aa27.79■■■□□ 2.04
CNOT2-227ENST00000551043 GTF3C3Q9Y5Q9 886 aa27.78■■■□□ 2.04
CNOT2-227ENST00000551043 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
CNOT2-227ENST00000551043 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
CNOT2-227ENST00000551043 TARBP1Q13395 1621 aaKnown RBP27.69■■■□□ 2.02
CNOT2-227ENST00000551043 MTUS2Q5JR59 1369 aa27.67■■■□□ 2.02
CNOT2-227ENST00000551043 SAMD9Q5K651 1589 aa27.67■■■□□ 2.02
CNOT2-227ENST00000551043 SIN3AQ96ST3 1273 aa27.62■■■□□ 2.01
CNOT2-227ENST00000551043 FGD6Q6ZV73 1430 aa27.6■■■□□ 2.01
CNOT2-227ENST00000551043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.013e-6■■□□□ 12.8
CNOT2-227ENST00000551043 GRIN2BQ13224 1484 aa27.57■■■□□ 2
CNOT2-227ENST00000551043 LRRIQ1Q96JM4 1722 aa27.55■■■□□ 2
CNOT2-227ENST00000551043 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
CNOT2-227ENST00000551043 NCOA2Q15596 1464 aa27.51■■□□□ 1.99
CNOT2-227ENST00000551043 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
CNOT2-227ENST00000551043 PTPRKQ15262 1439 aa27.48■■□□□ 1.99
CNOT2-227ENST00000551043 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.99
CNOT2-227ENST00000551043 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
CNOT2-227ENST00000551043 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
CNOT2-227ENST00000551043 IQGAP2Q13576 1575 aa27.42■■□□□ 1.98
CNOT2-227ENST00000551043 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
CNOT2-227ENST00000551043 MAGI3Q5TCQ9 1506 aa27.4■■□□□ 1.98
CNOT2-227ENST00000551043 EHBP1L1Q8N3D4 1523 aa27.4■■□□□ 1.98
CNOT2-227ENST00000551043 ARID3CA6NKF2 412 aa27.39■■□□□ 1.98
CNOT2-227ENST00000551043 SUPT6HQ7KZ85 1726 aaKnown RBP27.39■■□□□ 1.98
CNOT2-227ENST00000551043 CCDC18Q5T9S5 1454 aa27.38■■□□□ 1.97
CNOT2-227ENST00000551043 HFM1A2PYH4 1435 aa27.37■■□□□ 1.97
CNOT2-227ENST00000551043 TIMELESSQ9UNS1 1208 aa27.36■■□□□ 1.97
CNOT2-227ENST00000551043 IFT140Q96RY7 1462 aa27.34■■□□□ 1.97
CNOT2-227ENST00000551043 UGGT2Q9NYU1 1516 aa27.34■■□□□ 1.97
CNOT2-227ENST00000551043 NAIPQ13075 1403 aa27.32■■□□□ 1.96
CNOT2-227ENST00000551043 PPP1R15AO75807 674 aaPredicted RBP27.32■■□□□ 1.96
CNOT2-227ENST00000551043 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
CNOT2-227ENST00000551043 PTPN23Q9H3S7 1636 aa27.31■■□□□ 1.96
CNOT2-227ENST00000551043 ARHGEF11O15085 1522 aa27.3■■□□□ 1.96
CNOT2-227ENST00000551043 HECW1Q76N89 1606 aa27.3■■□□□ 1.96
CNOT2-227ENST00000551043 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
CNOT2-227ENST00000551043 CHIC2Q9UKJ5 165 aa27.29■■□□□ 1.96
CNOT2-227ENST00000551043 CDK13Q14004 1512 aaKnown RBP27.28■■□□□ 1.96
CNOT2-227ENST00000551043 UACAQ9BZF9 1416 aa27.28■■□□□ 1.96
CNOT2-227ENST00000551043 WDR62O43379 1518 aa27.28■■□□□ 1.96
CNOT2-227ENST00000551043 RRP7BPQ9NSQ0 103 aa27.27■■□□□ 1.96
CNOT2-227ENST00000551043 HIRIP3Q9BW71 556 aaPredicted RBP27.25■■□□□ 1.95
CNOT2-227ENST00000551043 DDX10Q13206 875 aaKnown RBP27.24■■□□□ 1.95
CNOT2-227ENST00000551043 PELP1Q8IZL8 1130 aaKnown RBP27.24■■□□□ 1.95
CNOT2-227ENST00000551043 TONSLQ96HA7 1378 aa27.22■■□□□ 1.95
CNOT2-227ENST00000551043 KIAA0586Q9BVV6 1533 aa27.2■■□□□ 1.94
CNOT2-227ENST00000551043 TCOF1Q13428 1488 aaKnown RBP27.18■■□□□ 1.94
CNOT2-227ENST00000551043 KCNH8Q96L42 1107 aa27.18■■□□□ 1.94
CNOT2-227ENST00000551043 DISP1Q96F81 1524 aa27.16■■□□□ 1.94
CNOT2-227ENST00000551043 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
CNOT2-227ENST00000551043 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.93
CNOT2-227ENST00000551043 TRIM52Q96A61 297 aa27.12■■□□□ 1.93
CNOT2-227ENST00000551043 KIAA0556O60303 1618 aa27.11■■□□□ 1.93
CNOT2-227ENST00000551043 MIA2Q96PC5 1412 aa27.11■■□□□ 1.93
CNOT2-227ENST00000551043 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
CNOT2-227ENST00000551043 FBLN2P98095 1184 aa27.09■■□□□ 1.93
CNOT2-227ENST00000551043 NUP153P49790 1475 aaKnown RBP27.07■■□□□ 1.92
CNOT2-227ENST00000551043 KDM6BO15054 1643 aa27.03■■□□□ 1.92
CNOT2-227ENST00000551043 ZNF644Q9H582 1327 aaPredicted RBP27.03■■□□□ 1.92
CNOT2-227ENST00000551043 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
CNOT2-227ENST00000551043 GCC2Q8IWJ2 1684 aa27■■□□□ 1.91
CNOT2-227ENST00000551043 AKNAQ7Z591 1439 aa27■■□□□ 1.91
CNOT2-227ENST00000551043 CDK11AQ9UQ88 783 aaPredicted RBP27■■□□□ 1.91
CNOT2-227ENST00000551043 RAPGEF6Q8TEU7 1601 aa26.99■■□□□ 1.91
CNOT2-227ENST00000551043 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
CNOT2-227ENST00000551043 MPHOSPH9Q99550 1183 aa26.99■■□□□ 1.91
CNOT2-227ENST00000551043 SYNJ2O15056 1496 aa26.96■■□□□ 1.91
CNOT2-227ENST00000551043 FOXD1Q16676 465 aa26.96■■□□□ 1.91
CNOT2-227ENST00000551043 CEP170Q5SW79 1584 aa26.95■■□□□ 1.91
CNOT2-227ENST00000551043 DAPK1P53355 1430 aa26.95■■□□□ 1.91
CNOT2-227ENST00000551043 KDM5BQ9UGL1 1544 aa26.95■■□□□ 1.91
CNOT2-227ENST00000551043 PRG4Q92954 1404 aaPredicted RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms