RNA–Protein interactions for RNA: ENST00000551016.5

RACGAP1-221, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-221ENST00000551016 PHLDB1Q86UU1 1377 aa10.11□□□□□ -0.79
RACGAP1-221ENST00000551016 MAP3K1Q13233 1512 aa10.1□□□□□ -0.79
RACGAP1-221ENST00000551016 HIRIP3Q9BW71 556 aaPredicted RBP10.09□□□□□ -0.79
RACGAP1-221ENST00000551016 LRRC9Q6ZRR7 1453 aa10.09□□□□□ -0.79
RACGAP1-221ENST00000551016 FAM50AQ14320 339 aaKnown RBP10.09□□□□□ -0.79
RACGAP1-221ENST00000551016 HMGXB3Q12766 1538 aa10.08□□□□□ -0.8
RACGAP1-221ENST00000551016 IGF1RP08069 1367 aa10.07□□□□□ -0.8
RACGAP1-221ENST00000551016 NEFLP07196 543 aa10.07□□□□□ -0.8
RACGAP1-221ENST00000551016 TRIM52Q96A61 297 aa10.07□□□□□ -0.8
RACGAP1-221ENST00000551016 CFTRP13569 1480 aa10.07□□□□□ -0.8
RACGAP1-221ENST00000551016 NCAPD3P42695 1498 aa10.07□□□□□ -0.8
RACGAP1-221ENST00000551016 RBM19Q9Y4C8 960 aaKnown RBP10.06□□□□□ -0.8
RACGAP1-221ENST00000551016 CCER2I3L3R5 266 aa10.05□□□□□ -0.8
RACGAP1-221ENST00000551016 ANP32CO43423 234 aa10.04□□□□□ -0.8
RACGAP1-221ENST00000551016 TIMELESSQ9UNS1 1208 aa10.04□□□□□ -0.8
RACGAP1-221ENST00000551016 CFAP43Q8NDM7 1665 aa10.04□□□□□ -0.8
RACGAP1-221ENST00000551016 CARMIL1Q5VZK9 1371 aa10.03□□□□□ -0.8
RACGAP1-221ENST00000551016 PCF11O94913 1555 aaKnown RBP10.03□□□□□ -0.8
RACGAP1-221ENST00000551016 BCL11AQ9H165 835 aa10.02□□□□□ -0.8
RACGAP1-221ENST00000551016 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
RACGAP1-221ENST00000551016 FHAD1B1AJZ9 1412 aa10.01□□□□□ -0.81
RACGAP1-221ENST00000551016 ATP1B4Q9UN42 357 aaPredicted RBP10.01□□□□□ -0.81
RACGAP1-221ENST00000551016 PRDM2Q13029 1718 aa10□□□□□ -0.81
RACGAP1-221ENST00000551016 FGD5Q6ZNL6 1462 aa9.98□□□□□ -0.81
RACGAP1-221ENST00000551016 FHOD3Q2V2M9 1422 aa9.97□□□□□ -0.81
RACGAP1-221ENST00000551016 TONSLQ96HA7 1378 aa9.97□□□□□ -0.81
RACGAP1-221ENST00000551016 MSH5O43196 834 aa9.96□□□□□ -0.82
RACGAP1-221ENST00000551016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.95□□□□□ -0.82
RACGAP1-221ENST00000551016 FYCO1Q9BQS8 1478 aa9.95□□□□□ -0.82
RACGAP1-221ENST00000551016 CCDC18Q5T9S5 1454 aa9.94□□□□□ -0.82
RACGAP1-221ENST00000551016 IRX6P78412 446 aaPredicted RBP9.94□□□□□ -0.82
RACGAP1-221ENST00000551016 FGD6Q6ZV73 1430 aa9.93□□□□□ -0.82
RACGAP1-221ENST00000551016 CASKIN1Q8WXD9 1431 aa9.93□□□□□ -0.82
RACGAP1-221ENST00000551016 HNRNPUQ00839 825 aaKnown RBP eCLIP9.92□□□□□ -0.82
RACGAP1-221ENST00000551016 PTPRKQ15262 1439 aa9.92□□□□□ -0.82
RACGAP1-221ENST00000551016 CADPSQ9ULU8 1353 aa9.91□□□□□ -0.82
RACGAP1-221ENST00000551016 UACAQ9BZF9 1416 aa9.91□□□□□ -0.82
RACGAP1-221ENST00000551016 PTPN23Q9H3S7 1636 aa9.91□□□□□ -0.82
RACGAP1-221ENST00000551016 AQRO60306 1485 aaKnown RBP eCLIP9.91□□□□□ -0.821e-6■■■■□ 20
RACGAP1-221ENST00000551016 EFCAB5A4FU69 1503 aa9.91□□□□□ -0.82
RACGAP1-221ENST00000551016 HFM1A2PYH4 1435 aa9.9□□□□□ -0.82
RACGAP1-221ENST00000551016 KDM5BQ9UGL1 1544 aa9.9□□□□□ -0.82
RACGAP1-221ENST00000551016 CDK11AQ9UQ88 783 aaPredicted RBP9.89□□□□□ -0.83
RACGAP1-221ENST00000551016 FANCIQ9NVI1 1328 aa9.89□□□□□ -0.83
RACGAP1-221ENST00000551016 NAIPQ13075 1403 aa9.88□□□□□ -0.83
RACGAP1-221ENST00000551016 WASHC2AQ641Q2 1341 aa9.87□□□□□ -0.83
RACGAP1-221ENST00000551016 MTUS2Q5JR59 1369 aa9.87□□□□□ -0.83
RACGAP1-221ENST00000551016 RAD54L2Q9Y4B4 1467 aa9.87□□□□□ -0.83
RACGAP1-221ENST00000551016 CTTNBP2Q8WZ74 1663 aa9.87□□□□□ -0.83
RACGAP1-221ENST00000551016 SNAPC4Q5SXM2 1469 aa9.87□□□□□ -0.83
RACGAP1-221ENST00000551016 HSPA5P11021 654 aaKnown RBP9.86□□□□□ -0.83
RACGAP1-221ENST00000551016 FMN1Q68DA7 1419 aa9.86□□□□□ -0.83
RACGAP1-221ENST00000551016 LRRIQ1Q96JM4 1722 aa9.85□□□□□ -0.83
RACGAP1-221ENST00000551016 CCDC184Q52MB2 194 aa9.84□□□□□ -0.83
RACGAP1-221ENST00000551016 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
RACGAP1-221ENST00000551016 NCOA2Q15596 1464 aa9.84□□□□□ -0.83
RACGAP1-221ENST00000551016 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
RACGAP1-221ENST00000551016 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
RACGAP1-221ENST00000551016 MYOM3Q5VTT5 1437 aa9.83□□□□□ -0.84
RACGAP1-221ENST00000551016 CC2D2AQ9P2K1 1620 aa9.83□□□□□ -0.84
RACGAP1-221ENST00000551016 CUL7Q14999 1698 aa9.83□□□□□ -0.84
RACGAP1-221ENST00000551016 PPP4R2Q9NY27 417 aa9.82□□□□□ -0.84
RACGAP1-221ENST00000551016 POLA1P09884 1462 aaPredicted RBP9.82□□□□□ -0.84
RACGAP1-221ENST00000551016 DNMBPQ6XZF7 1577 aa9.81□□□□□ -0.84
RACGAP1-221ENST00000551016 ERICH6BQ5W0A0 696 aa9.81□□□□□ -0.84
RACGAP1-221ENST00000551016 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
RACGAP1-221ENST00000551016 CNTLNQ9NXG0 1405 aa9.81□□□□□ -0.84
RACGAP1-221ENST00000551016 SUPT6HQ7KZ85 1726 aaKnown RBP9.81□□□□□ -0.84
RACGAP1-221ENST00000551016 DENND4BO75064 1496 aaPredicted RBP9.81□□□□□ -0.84
RACGAP1-221ENST00000551016 EIF4G2P78344 907 aaKnown RBP eCLIP9.8□□□□□ -0.84
RACGAP1-221ENST00000551016 TOPBP1Q92547 1522 aa9.8□□□□□ -0.84
RACGAP1-221ENST00000551016 FAM9BQ8IZU0 186 aa9.8□□□□□ -0.84
RACGAP1-221ENST00000551016 CHIC2Q9UKJ5 165 aa9.8□□□□□ -0.84
RACGAP1-221ENST00000551016 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
RACGAP1-221ENST00000551016 SAMD9Q5K651 1589 aa9.79□□□□□ -0.84
RACGAP1-221ENST00000551016 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
RACGAP1-221ENST00000551016 B4GALNT3Q6L9W6 998 aa9.79□□□□□ -0.84
RACGAP1-221ENST00000551016 KDM6BO15054 1643 aa9.78□□□□□ -0.84
RACGAP1-221ENST00000551016 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
RACGAP1-221ENST00000551016 EHBP1L1Q8N3D4 1523 aa9.78□□□□□ -0.84
RACGAP1-221ENST00000551016 GCC2Q8IWJ2 1684 aa9.78□□□□□ -0.84
RACGAP1-221ENST00000551016 PRKRIP1Q9H875 184 aaPredicted RBP9.78□□□□□ -0.84
RACGAP1-221ENST00000551016 UGGT2Q9NYU1 1516 aa9.78□□□□□ -0.84
RACGAP1-221ENST00000551016 CCDC7Q96M83 1385 aa9.77□□□□□ -0.85
RACGAP1-221ENST00000551016 MAGI3Q5TCQ9 1506 aa9.77□□□□□ -0.85
RACGAP1-221ENST00000551016 NCOA1Q15788 1441 aa9.77□□□□□ -0.85
RACGAP1-221ENST00000551016 L3MBTL2Q969R5 705 aa9.77□□□□□ -0.85
RACGAP1-221ENST00000551016 MRS2Q9HD23 443 aa9.77□□□□□ -0.85
RACGAP1-221ENST00000551016 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
RACGAP1-221ENST00000551016 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
RACGAP1-221ENST00000551016 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
RACGAP1-221ENST00000551016 FOXD1Q16676 465 aa9.75□□□□□ -0.85
RACGAP1-221ENST00000551016 MPHOSPH9Q99550 1183 aa9.75□□□□□ -0.85
RACGAP1-221ENST00000551016 TCOF1Q13428 1488 aaKnown RBP9.74□□□□□ -0.85
RACGAP1-221ENST00000551016 NESP48681 1621 aa9.73□□□□□ -0.85
RACGAP1-221ENST00000551016 NBPF8Q3BBV2 869 aa9.73□□□□□ -0.85
RACGAP1-221ENST00000551016 TDRD9Q8NDG6 1382 aaKnown RBP9.72□□□□□ -0.85
RACGAP1-221ENST00000551016 AKNAQ7Z591 1439 aa9.72□□□□□ -0.85
RACGAP1-221ENST00000551016 KIF7Q2M1P5 1343 aa9.71□□□□□ -0.86
RACGAP1-221ENST00000551016 DEKP35659 375 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms