RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 CYB5RLQ6IPT4 315 aa22.37■■□□□ 1.17
ERBB3-215ENST00000550828 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
ERBB3-215ENST00000550828 NUP160Q12769 1436 aa22.35■■□□□ 1.17
ERBB3-215ENST00000550828 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
ERBB3-215ENST00000550828 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
ERBB3-215ENST00000550828 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
ERBB3-215ENST00000550828 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
ERBB3-215ENST00000550828 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
ERBB3-215ENST00000550828 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
ERBB3-215ENST00000550828 KIAA0586Q9BVV6 1533 aa22.2■■□□□ 1.14
ERBB3-215ENST00000550828 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
ERBB3-215ENST00000550828 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
ERBB3-215ENST00000550828 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
ERBB3-215ENST00000550828 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
ERBB3-215ENST00000550828 UGGT2Q9NYU1 1516 aa22.09■■□□□ 1.13
ERBB3-215ENST00000550828 UBTFP17480 764 aaKnown RBP22.07■■□□□ 1.12
ERBB3-215ENST00000550828 TNIKQ9UKE5 1360 aa22.05■■□□□ 1.12
ERBB3-215ENST00000550828 DISP1Q96F81 1524 aa22.03■■□□□ 1.12
ERBB3-215ENST00000550828 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
ERBB3-215ENST00000550828 JPH4Q96JJ6 628 aa22.03■■□□□ 1.12
ERBB3-215ENST00000550828 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
ERBB3-215ENST00000550828 KIAA0556O60303 1618 aa22.01■■□□□ 1.11
ERBB3-215ENST00000550828 PRG4Q92954 1404 aaPredicted RBP22■■□□□ 1.11
ERBB3-215ENST00000550828 EFCAB5A4FU69 1503 aa21.93■■□□□ 1.1
ERBB3-215ENST00000550828 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
ERBB3-215ENST00000550828 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
ERBB3-215ENST00000550828 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
ERBB3-215ENST00000550828 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
ERBB3-215ENST00000550828 CLIP1P30622 1438 aa21.87■■□□□ 1.09
ERBB3-215ENST00000550828 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
ERBB3-215ENST00000550828 P3H3Q8IVL6 736 aa21.84■■□□□ 1.09
ERBB3-215ENST00000550828 PTPRGP23470 1445 aa21.75■■□□□ 1.07
ERBB3-215ENST00000550828 ABCA8O94911 1581 aa21.74■■□□□ 1.07
ERBB3-215ENST00000550828 TTBK1Q5TCY1 1321 aaPredicted RBP21.73■■□□□ 1.07
ERBB3-215ENST00000550828 ADCY10Q96PN6 1610 aa21.73■■□□□ 1.07
ERBB3-215ENST00000550828 PLB1Q6P1J6 1458 aa21.72■■□□□ 1.07
ERBB3-215ENST00000550828 RAPGEF6Q8TEU7 1601 aa21.7■■□□□ 1.06
ERBB3-215ENST00000550828 PCF11O94913 1555 aaKnown RBP21.7■■□□□ 1.06
ERBB3-215ENST00000550828 LRRIQ1Q96JM4 1722 aa21.69■■□□□ 1.06
ERBB3-215ENST00000550828 ABCC2Q92887 1545 aa21.66■■□□□ 1.06
ERBB3-215ENST00000550828 FMN1Q68DA7 1419 aa21.64■■□□□ 1.06
ERBB3-215ENST00000550828 UACAQ9BZF9 1416 aa21.64■■□□□ 1.06
ERBB3-215ENST00000550828 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
ERBB3-215ENST00000550828 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
ERBB3-215ENST00000550828 NUP153P49790 1475 aaKnown RBP21.61■■□□□ 1.05
ERBB3-215ENST00000550828 VPS8Q8N3P4 1428 aa21.6■■□□□ 1.05
ERBB3-215ENST00000550828 HECW1Q76N89 1606 aa21.59■■□□□ 1.05
ERBB3-215ENST00000550828 ZCCHC11Q5TAX3 1644 aaKnown RBP21.58■■□□□ 1.05
ERBB3-215ENST00000550828 CASKIN1Q8WXD9 1431 aa21.58■■□□□ 1.05
ERBB3-215ENST00000550828 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.04
ERBB3-215ENST00000550828 KDM5BQ9UGL1 1544 aa21.55■■□□□ 1.04
ERBB3-215ENST00000550828 CDK13Q14004 1512 aaKnown RBP21.54■■□□□ 1.04
ERBB3-215ENST00000550828 ATP10BO94823 1461 aa21.52■■□□□ 1.03
ERBB3-215ENST00000550828 EPRSP07814 1512 aaKnown RBP21.5■■□□□ 1.03
ERBB3-215ENST00000550828 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
ERBB3-215ENST00000550828 ARID3CA6NKF2 412 aa21.49■■□□□ 1.03
ERBB3-215ENST00000550828 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
ERBB3-215ENST00000550828 CCDC18Q5T9S5 1454 aa21.43■■□□□ 1.02
ERBB3-215ENST00000550828 MAPKBP1O60336 1514 aa21.43■■□□□ 1.02
ERBB3-215ENST00000550828 MAGI3Q5TCQ9 1506 aa21.43■■□□□ 1.02
ERBB3-215ENST00000550828 TIAM1Q13009 1591 aa21.42■■□□□ 1.02
ERBB3-215ENST00000550828 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
ERBB3-215ENST00000550828 ASXL2Q76L83 1435 aa21.38■■□□□ 1.01
ERBB3-215ENST00000550828 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
ERBB3-215ENST00000550828 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
ERBB3-215ENST00000550828 WDR7Q9Y4E6 1490 aa21.34■■□□□ 1.01
ERBB3-215ENST00000550828 NPM1P06748 294 aaKnown RBP eCLIP21.34■■□□□ 1.01
ERBB3-215ENST00000550828 FAM69CQ0P6D2 419 aa21.33■■□□□ 1.01
ERBB3-215ENST00000550828 KIF14Q15058 1648 aa21.33■■□□□ 1
ERBB3-215ENST00000550828 KDM6BO15054 1643 aa21.32■■□□□ 1
ERBB3-215ENST00000550828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.29■■□□□ 1
ERBB3-215ENST00000550828 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
ERBB3-215ENST00000550828 TROQ12816 1431 aaPredicted RBP21.29■■□□□ 1
ERBB3-215ENST00000550828 LRRC9Q6ZRR7 1453 aa21.28■■□□□ 1
ERBB3-215ENST00000550828 EHBP1L1Q8N3D4 1523 aa21.28■■□□□ 1
ERBB3-215ENST00000550828 KANK4Q5T7N3 995 aaPredicted RBP21.26■□□□□ 0.99
ERBB3-215ENST00000550828 TTC37Q6PGP7 1564 aa21.25■□□□□ 0.99
ERBB3-215ENST00000550828 ABCA9Q8IUA7 1624 aa21.23■□□□□ 0.99
ERBB3-215ENST00000550828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.23■□□□□ 0.99
ERBB3-215ENST00000550828 GLI2P10070 1586 aa21.23■□□□□ 0.99
ERBB3-215ENST00000550828 PLEKHD1A6NEE1 506 aa21.22■□□□□ 0.99
ERBB3-215ENST00000550828 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
ERBB3-215ENST00000550828 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
ERBB3-215ENST00000550828 MAP3K4Q9Y6R4 1608 aa21.21■□□□□ 0.99
ERBB3-215ENST00000550828 MTUS2Q5JR59 1369 aa21.21■□□□□ 0.99
ERBB3-215ENST00000550828 CDC42BPAQ5VT25 1732 aa21.19■□□□□ 0.98
ERBB3-215ENST00000550828 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
ERBB3-215ENST00000550828 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
ERBB3-215ENST00000550828 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
ERBB3-215ENST00000550828 KDM4FA0A1W2PPD8 638 aa21.17■□□□□ 0.98
ERBB3-215ENST00000550828 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
ERBB3-215ENST00000550828 APLP2Q06481 763 aa21.15■□□□□ 0.98
ERBB3-215ENST00000550828 CDC42BPBQ9Y5S2 1711 aa21.15■□□□□ 0.98
ERBB3-215ENST00000550828 NCOA2Q15596 1464 aa21.14■□□□□ 0.98
ERBB3-215ENST00000550828 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
ERBB3-215ENST00000550828 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
ERBB3-215ENST00000550828 ITSN2Q9NZM3 1697 aa21.08■□□□□ 0.96
ERBB3-215ENST00000550828 GPATCH8Q9UKJ3 1502 aaKnown RBP21.07■□□□□ 0.96
ERBB3-215ENST00000550828 CD109Q6YHK3 1445 aa21.05■□□□□ 0.96
ERBB3-215ENST00000550828 PHLDB1Q86UU1 1377 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms