RNA–Protein interactions for RNA: ENST00000550802.1

PFKM-220, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-220ENST00000550802 CUL7Q14999 1698 aa14.33□□□□□ -0.11
PFKM-220ENST00000550802 SNAPC4Q5SXM2 1469 aa14.32□□□□□ -0.12
PFKM-220ENST00000550802 CHMP7Q8WUX9 453 aaPredicted RBP14.32□□□□□ -0.12
PFKM-220ENST00000550802 IGF1RP08069 1367 aa14.32□□□□□ -0.12
PFKM-220ENST00000550802 CLASP1Q7Z460 1538 aa14.31□□□□□ -0.12
PFKM-220ENST00000550802 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
PFKM-220ENST00000550802 CARMIL1Q5VZK9 1371 aa14.3□□□□□ -0.12
PFKM-220ENST00000550802 GRIN2BQ13224 1484 aa14.3□□□□□ -0.12
PFKM-220ENST00000550802 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
PFKM-220ENST00000550802 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
PFKM-220ENST00000550802 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
PFKM-220ENST00000550802 SYNJ2O15056 1496 aa14.26□□□□□ -0.13
PFKM-220ENST00000550802 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
PFKM-220ENST00000550802 APLP2Q06481 763 aa14.24□□□□□ -0.13
PFKM-220ENST00000550802 HRCP23327 699 aa14.2□□□□□ -0.14
PFKM-220ENST00000550802 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
PFKM-220ENST00000550802 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
PFKM-220ENST00000550802 RANGAP1P46060 587 aaPredicted RBP14.16□□□□□ -0.14
PFKM-220ENST00000550802 EFCAB5A4FU69 1503 aa14.15□□□□□ -0.14
PFKM-220ENST00000550802 ARHGAP35Q9NRY4 1499 aa14.14□□□□□ -0.15
PFKM-220ENST00000550802 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
PFKM-220ENST00000550802 FHAD1B1AJZ9 1412 aa14.13□□□□□ -0.15
PFKM-220ENST00000550802 GRIN2AQ12879 1464 aa14.1□□□□□ -0.15
PFKM-220ENST00000550802 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
PFKM-220ENST00000550802 NUP160Q12769 1436 aa14.07□□□□□ -0.16
PFKM-220ENST00000550802 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
PFKM-220ENST00000550802 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
PFKM-220ENST00000550802 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
PFKM-220ENST00000550802 TTBK1Q5TCY1 1321 aaPredicted RBP14.03□□□□□ -0.16
PFKM-220ENST00000550802 SHROOM2Q13796 1616 aa14.02□□□□□ -0.16
PFKM-220ENST00000550802 FMN1Q68DA7 1419 aa14.01□□□□□ -0.17
PFKM-220ENST00000550802 SAMD9Q5K651 1589 aa14□□□□□ -0.17
PFKM-220ENST00000550802 FYCO1Q9BQS8 1478 aa13.99□□□□□ -0.17
PFKM-220ENST00000550802 TIAM1Q13009 1591 aa13.98□□□□□ -0.17
PFKM-220ENST00000550802 IQGAP2Q13576 1575 aa13.98□□□□□ -0.17
PFKM-220ENST00000550802 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
PFKM-220ENST00000550802 PCF11O94913 1555 aaKnown RBP13.96□□□□□ -0.17
PFKM-220ENST00000550802 CASKIN1Q8WXD9 1431 aa13.96□□□□□ -0.18
PFKM-220ENST00000550802 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
PFKM-220ENST00000550802 FHOD3Q2V2M9 1422 aa13.95□□□□□ -0.18
PFKM-220ENST00000550802 PRG4Q92954 1404 aaPredicted RBP13.94□□□□□ -0.18
PFKM-220ENST00000550802 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.18
PFKM-220ENST00000550802 KIF13AQ9H1H9 1805 aa13.9□□□□□ -0.18
PFKM-220ENST00000550802 P3H3Q8IVL6 736 aa13.9□□□□□ -0.18
PFKM-220ENST00000550802 LRRC9Q6ZRR7 1453 aa13.9□□□□□ -0.18
PFKM-220ENST00000550802 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.19
PFKM-220ENST00000550802 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
PFKM-220ENST00000550802 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
PFKM-220ENST00000550802 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
PFKM-220ENST00000550802 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
PFKM-220ENST00000550802 CCDC18Q5T9S5 1454 aa13.86□□□□□ -0.19
PFKM-220ENST00000550802 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
PFKM-220ENST00000550802 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
PFKM-220ENST00000550802 ABCC10Q5T3U5 1492 aa13.85□□□□□ -0.19
PFKM-220ENST00000550802 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
PFKM-220ENST00000550802 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.19
PFKM-220ENST00000550802 MAPKBP1O60336 1514 aa13.83□□□□□ -0.2
PFKM-220ENST00000550802 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
PFKM-220ENST00000550802 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
PFKM-220ENST00000550802 KIAA0556O60303 1618 aa13.81□□□□□ -0.2
PFKM-220ENST00000550802 EHBP1L1Q8N3D4 1523 aa13.8□□□□□ -0.2
PFKM-220ENST00000550802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
PFKM-220ENST00000550802 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
PFKM-220ENST00000550802 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
PFKM-220ENST00000550802 DIP2BQ9P265 1576 aa13.78□□□□□ -0.2
PFKM-220ENST00000550802 ADCY10Q96PN6 1610 aa13.78□□□□□ -0.2
PFKM-220ENST00000550802 SUPT6HQ7KZ85 1726 aaKnown RBP13.76□□□□□ -0.21
PFKM-220ENST00000550802 DISP1Q96F81 1524 aa13.75□□□□□ -0.21
PFKM-220ENST00000550802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.74□□□□□ -0.21
PFKM-220ENST00000550802 LRRIQ1Q96JM4 1722 aa13.74□□□□□ -0.21
PFKM-220ENST00000550802 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
PFKM-220ENST00000550802 PTPRGP23470 1445 aa13.72□□□□□ -0.21
PFKM-220ENST00000550802 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
PFKM-220ENST00000550802 PHLDB1Q86UU1 1377 aa13.71□□□□□ -0.21
PFKM-220ENST00000550802 KDM6BO15054 1643 aa13.71□□□□□ -0.22
PFKM-220ENST00000550802 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
PFKM-220ENST00000550802 NCOA2Q15596 1464 aa13.68□□□□□ -0.22
PFKM-220ENST00000550802 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
PFKM-220ENST00000550802 KDM4FA0A1W2PPD8 638 aa13.68□□□□□ -0.22
PFKM-220ENST00000550802 MYOM3Q5VTT5 1437 aa13.67□□□□□ -0.22
PFKM-220ENST00000550802 CDK11AQ9UQ88 783 aaPredicted RBP13.67□□□□□ -0.22
PFKM-220ENST00000550802 TSPOAP1O95153 1857 aa13.66□□□□□ -0.22
PFKM-220ENST00000550802 FAM50AQ14320 339 aaKnown RBP13.66□□□□□ -0.22
PFKM-220ENST00000550802 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
PFKM-220ENST00000550802 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
PFKM-220ENST00000550802 GLI2P10070 1586 aa13.63□□□□□ -0.23
PFKM-220ENST00000550802 UHRF1BP1LA0JNW5 1464 aa13.63□□□□□ -0.23
PFKM-220ENST00000550802 NUP153P49790 1475 aaKnown RBP13.63□□□□□ -0.23
PFKM-220ENST00000550802 PLB1Q6P1J6 1458 aa13.63□□□□□ -0.23
PFKM-220ENST00000550802 ITGAEP38570 1179 aa13.62□□□□□ -0.23
PFKM-220ENST00000550802 ASXL2Q76L83 1435 aa13.62□□□□□ -0.23
PFKM-220ENST00000550802 MAGI3Q5TCQ9 1506 aa13.61□□□□□ -0.23
PFKM-220ENST00000550802 MIA2Q96PC5 1412 aa13.61□□□□□ -0.23
PFKM-220ENST00000550802 SETD5Q9C0A6 1442 aa13.61□□□□□ -0.23
PFKM-220ENST00000550802 PTPN23Q9H3S7 1636 aa13.61□□□□□ -0.23
PFKM-220ENST00000550802 UACAQ9BZF9 1416 aa13.6□□□□□ -0.23
PFKM-220ENST00000550802 ABCA8O94911 1581 aa13.58□□□□□ -0.23
PFKM-220ENST00000550802 TCOF1Q13428 1488 aaKnown RBP13.58□□□□□ -0.24
PFKM-220ENST00000550802 PPRC1Q5VV67 1664 aaKnown RBP13.57□□□□□ -0.24
PFKM-220ENST00000550802 DHX57Q6P158 1386 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms