RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 ITGAEP38570 1179 aa14.92□□□□□ -0.02
ERBB3-214ENST00000550070 IGF1RP08069 1367 aa14.87□□□□□ -0.03
ERBB3-214ENST00000550070 ARXQ96QS3 562 aa14.87□□□□□ -0.03
ERBB3-214ENST00000550070 RAB3GAP2Q9H2M9 1393 aa14.87□□□□□ -0.03
ERBB3-214ENST00000550070 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
ERBB3-214ENST00000550070 TIAM1Q13009 1591 aa14.85□□□□□ -0.03
ERBB3-214ENST00000550070 SUPT16HQ9Y5B9 1047 aaKnown RBP14.85□□□□□ -0.03
ERBB3-214ENST00000550070 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
ERBB3-214ENST00000550070 MAPKBP1O60336 1514 aa14.85□□□□□ -0.03
ERBB3-214ENST00000550070 MAP3K1Q13233 1512 aa14.83□□□□□ -0.04
ERBB3-214ENST00000550070 CARMIL1Q5VZK9 1371 aa14.8□□□□□ -0.04
ERBB3-214ENST00000550070 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
ERBB3-214ENST00000550070 SETD5Q9C0A6 1442 aa14.79□□□□□ -0.04
ERBB3-214ENST00000550070 PHLDB1Q86UU1 1377 aa14.78□□□□□ -0.04
ERBB3-214ENST00000550070 KCNH8Q96L42 1107 aa14.78□□□□□ -0.04
ERBB3-214ENST00000550070 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
ERBB3-214ENST00000550070 FGD5Q6ZNL6 1462 aa14.77□□□□□ -0.05
ERBB3-214ENST00000550070 SIN3AQ96ST3 1273 aa14.74□□□□□ -0.05
ERBB3-214ENST00000550070 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
ERBB3-214ENST00000550070 FAM50AQ14320 339 aaKnown RBP14.73□□□□□ -0.05
ERBB3-214ENST00000550070 TIMELESSQ9UNS1 1208 aa14.73□□□□□ -0.05
ERBB3-214ENST00000550070 CFAP43Q8NDM7 1665 aa14.72□□□□□ -0.05
ERBB3-214ENST00000550070 PCF11O94913 1555 aaKnown RBP14.72□□□□□ -0.05
ERBB3-214ENST00000550070 P3H3Q8IVL6 736 aa14.72□□□□□ -0.05
ERBB3-214ENST00000550070 FHAD1B1AJZ9 1412 aa14.71□□□□□ -0.05
ERBB3-214ENST00000550070 DDX10Q13206 875 aaKnown RBP14.69□□□□□ -0.06
ERBB3-214ENST00000550070 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
ERBB3-214ENST00000550070 ATP1B4Q9UN42 357 aaPredicted RBP14.68□□□□□ -0.06
ERBB3-214ENST00000550070 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
ERBB3-214ENST00000550070 TSHZ2Q9NRE2 1034 aa14.66□□□□□ -0.06
ERBB3-214ENST00000550070 FHOD3Q2V2M9 1422 aa14.65□□□□□ -0.06
ERBB3-214ENST00000550070 PPP1R15AO75807 674 aaPredicted RBP14.65□□□□□ -0.07
ERBB3-214ENST00000550070 HIRIP3Q9BW71 556 aaPredicted RBP14.62□□□□□ -0.07
ERBB3-214ENST00000550070 FYCO1Q9BQS8 1478 aa14.62□□□□□ -0.07
ERBB3-214ENST00000550070 RAD54L2Q9Y4B4 1467 aa14.62□□□□□ -0.07
ERBB3-214ENST00000550070 KIF21AQ7Z4S6 1674 aa14.6□□□□□ -0.07
ERBB3-214ENST00000550070 CASKIN1Q8WXD9 1431 aa14.6□□□□□ -0.07
ERBB3-214ENST00000550070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.6□□□□□ -0.07
ERBB3-214ENST00000550070 EFCAB5A4FU69 1503 aa14.59□□□□□ -0.07
ERBB3-214ENST00000550070 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.085e-7■■■■□ 22.9
ERBB3-214ENST00000550070 ABCA10Q8WWZ4 1543 aa14.58□□□□□ -0.08
ERBB3-214ENST00000550070 DNMBPQ6XZF7 1577 aa14.57□□□□□ -0.08
ERBB3-214ENST00000550070 BCANQ96GW7 911 aa14.57□□□□□ -0.08
ERBB3-214ENST00000550070 POLA1P09884 1462 aaPredicted RBP14.56□□□□□ -0.08
ERBB3-214ENST00000550070 CTTNBP2Q8WZ74 1663 aa14.56□□□□□ -0.08
ERBB3-214ENST00000550070 FKBP8Q14318 412 aa14.56□□□□□ -0.08
ERBB3-214ENST00000550070 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
ERBB3-214ENST00000550070 FGD6Q6ZV73 1430 aa14.55□□□□□ -0.08
ERBB3-214ENST00000550070 TOPBP1Q92547 1522 aa14.54□□□□□ -0.08
ERBB3-214ENST00000550070 CUL7Q14999 1698 aa14.54□□□□□ -0.08
ERBB3-214ENST00000550070 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
ERBB3-214ENST00000550070 CCER2I3L3R5 266 aa14.53□□□□□ -0.08
ERBB3-214ENST00000550070 PTPRKQ15262 1439 aa14.52□□□□□ -0.08
ERBB3-214ENST00000550070 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.09
ERBB3-214ENST00000550070 PODXL2Q9NZ53 605 aa14.52□□□□□ -0.09
ERBB3-214ENST00000550070 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
ERBB3-214ENST00000550070 ANP32CO43423 234 aa14.51□□□□□ -0.09
ERBB3-214ENST00000550070 CCDC18Q5T9S5 1454 aa14.51□□□□□ -0.09
ERBB3-214ENST00000550070 TONSLQ96HA7 1378 aa14.5□□□□□ -0.09
ERBB3-214ENST00000550070 TRIM52Q96A61 297 aa14.5□□□□□ -0.09
ERBB3-214ENST00000550070 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
ERBB3-214ENST00000550070 LRRIQ1Q96JM4 1722 aa14.49□□□□□ -0.09
ERBB3-214ENST00000550070 HFM1A2PYH4 1435 aa14.49□□□□□ -0.09
ERBB3-214ENST00000550070 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
ERBB3-214ENST00000550070 MTUS2Q5JR59 1369 aa14.49□□□□□ -0.09
ERBB3-214ENST00000550070 UACAQ9BZF9 1416 aa14.48□□□□□ -0.09
ERBB3-214ENST00000550070 PTPN23Q9H3S7 1636 aa14.48□□□□□ -0.09
ERBB3-214ENST00000550070 NAIPQ13075 1403 aa14.45□□□□□ -0.1
ERBB3-214ENST00000550070 SAMD9Q5K651 1589 aa14.45□□□□□ -0.1
ERBB3-214ENST00000550070 NCOA2Q15596 1464 aa14.44□□□□□ -0.1
ERBB3-214ENST00000550070 TULP1O00294 542 aaPredicted RBP14.44□□□□□ -0.1
ERBB3-214ENST00000550070 TDRD9Q8NDG6 1382 aaKnown RBP14.43□□□□□ -0.1
ERBB3-214ENST00000550070 NEFLP07196 543 aa14.43□□□□□ -0.1
ERBB3-214ENST00000550070 ANP32EQ9BTT0 268 aa14.43□□□□□ -0.1
ERBB3-214ENST00000550070 MYOM3Q5VTT5 1437 aa14.43□□□□□ -0.1
ERBB3-214ENST00000550070 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
ERBB3-214ENST00000550070 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
ERBB3-214ENST00000550070 KDM5BQ9UGL1 1544 aa14.42□□□□□ -0.1
ERBB3-214ENST00000550070 SUPT6HQ7KZ85 1726 aaKnown RBP14.4□□□□□ -0.1
ERBB3-214ENST00000550070 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
ERBB3-214ENST00000550070 UBE2Q2Q8WVN8 375 aa14.38□□□□□ -0.11
ERBB3-214ENST00000550070 EHBP1L1Q8N3D4 1523 aa14.38□□□□□ -0.11
ERBB3-214ENST00000550070 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
ERBB3-214ENST00000550070 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
ERBB3-214ENST00000550070 MAGI3Q5TCQ9 1506 aa14.36□□□□□ -0.11
ERBB3-214ENST00000550070 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
ERBB3-214ENST00000550070 HOMEZQ8IX15 550 aa14.36□□□□□ -0.11
ERBB3-214ENST00000550070 RBM19Q9Y4C8 960 aaKnown RBP14.36□□□□□ -0.11
ERBB3-214ENST00000550070 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
ERBB3-214ENST00000550070 RRP7BPQ9NSQ0 103 aa14.35□□□□□ -0.11
ERBB3-214ENST00000550070 ARHGEF11O15085 1522 aa14.35□□□□□ -0.11
ERBB3-214ENST00000550070 ZNF608Q9ULD9 1512 aaPredicted RBP14.35□□□□□ -0.11
ERBB3-214ENST00000550070 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
ERBB3-214ENST00000550070 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
ERBB3-214ENST00000550070 HSPA5P11021 654 aaKnown RBP14.33□□□□□ -0.12
ERBB3-214ENST00000550070 WASHC2AQ641Q2 1341 aa14.33□□□□□ -0.12
ERBB3-214ENST00000550070 HNRNPUQ00839 825 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERBB3-214ENST00000550070 GCC2Q8IWJ2 1684 aa14.31□□□□□ -0.12
ERBB3-214ENST00000550070 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
ERBB3-214ENST00000550070 KDM6BO15054 1643 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms