RNA–Protein interactions for RNA: ENST00000549832.1

ERBB3-213, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-213ENST00000549832 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.29
ERBB3-213ENST00000549832 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.3
ERBB3-213ENST00000549832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.3
ERBB3-213ENST00000549832 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.3
ERBB3-213ENST00000549832 KDM2AQ9Y2K7 1162 aa13.19□□□□□ -0.3
ERBB3-213ENST00000549832 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
ERBB3-213ENST00000549832 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
ERBB3-213ENST00000549832 NESP48681 1621 aa13.18□□□□□ -0.3
ERBB3-213ENST00000549832 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
ERBB3-213ENST00000549832 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-213ENST00000549832 TPRNQ4KMQ1 711 aa13.16□□□□□ -0.3
ERBB3-213ENST00000549832 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
ERBB3-213ENST00000549832 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
ERBB3-213ENST00000549832 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
ERBB3-213ENST00000549832 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
ERBB3-213ENST00000549832 TOPBP1Q92547 1522 aa13.08□□□□□ -0.31
ERBB3-213ENST00000549832 ABCA5Q8WWZ7 1642 aa13.05□□□□□ -0.32
ERBB3-213ENST00000549832 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
ERBB3-213ENST00000549832 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
ERBB3-213ENST00000549832 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
ERBB3-213ENST00000549832 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
ERBB3-213ENST00000549832 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
ERBB3-213ENST00000549832 FBLN2P98095 1184 aa13□□□□□ -0.33
ERBB3-213ENST00000549832 PBRM1Q86U86 1689 aa13□□□□□ -0.33
ERBB3-213ENST00000549832 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
ERBB3-213ENST00000549832 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
ERBB3-213ENST00000549832 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
ERBB3-213ENST00000549832 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.34
ERBB3-213ENST00000549832 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
ERBB3-213ENST00000549832 ARXQ96QS3 562 aa12.94□□□□□ -0.34
ERBB3-213ENST00000549832 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
ERBB3-213ENST00000549832 CLASP1Q7Z460 1538 aa12.93□□□□□ -0.34
ERBB3-213ENST00000549832 CUX1P39880 1505 aa12.92□□□□□ -0.34
ERBB3-213ENST00000549832 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
ERBB3-213ENST00000549832 SHROOM2Q13796 1616 aa12.91□□□□□ -0.34
ERBB3-213ENST00000549832 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.35
ERBB3-213ENST00000549832 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
ERBB3-213ENST00000549832 CHD1O14646 1710 aa12.87□□□□□ -0.35
ERBB3-213ENST00000549832 CUL7Q14999 1698 aa12.86□□□□□ -0.35
ERBB3-213ENST00000549832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.352e-11■■□□□ 11.9
ERBB3-213ENST00000549832 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
ERBB3-213ENST00000549832 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
ERBB3-213ENST00000549832 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
ERBB3-213ENST00000549832 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
ERBB3-213ENST00000549832 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
ERBB3-213ENST00000549832 FGD5Q6ZNL6 1462 aa12.79□□□□□ -0.36
ERBB3-213ENST00000549832 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
ERBB3-213ENST00000549832 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
ERBB3-213ENST00000549832 SPRYD3Q8NCJ5 442 aa12.75□□□□□ -0.37
ERBB3-213ENST00000549832 TSHZ2Q9NRE2 1034 aa12.75□□□□□ -0.37
ERBB3-213ENST00000549832 GTF3C3Q9Y5Q9 886 aa12.75□□□□□ -0.37
ERBB3-213ENST00000549832 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
ERBB3-213ENST00000549832 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
ERBB3-213ENST00000549832 NUP160Q12769 1436 aa12.72□□□□□ -0.37
ERBB3-213ENST00000549832 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
ERBB3-213ENST00000549832 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.37
ERBB3-213ENST00000549832 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.37
ERBB3-213ENST00000549832 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.37
ERBB3-213ENST00000549832 EIF5BO60841 1220 aaKnown RBP12.7□□□□□ -0.38
ERBB3-213ENST00000549832 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
ERBB3-213ENST00000549832 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
ERBB3-213ENST00000549832 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.38
ERBB3-213ENST00000549832 SOGA1O94964 1423 aa12.69□□□□□ -0.38
ERBB3-213ENST00000549832 ZNF608Q9ULD9 1512 aaPredicted RBP12.67□□□□□ -0.38
ERBB3-213ENST00000549832 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
ERBB3-213ENST00000549832 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
ERBB3-213ENST00000549832 RGL2O15211 777 aa12.65□□□□□ -0.38
ERBB3-213ENST00000549832 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
ERBB3-213ENST00000549832 TMEM132AQ24JP5 1023 aa12.63□□□□□ -0.39
ERBB3-213ENST00000549832 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
ERBB3-213ENST00000549832 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
ERBB3-213ENST00000549832 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
ERBB3-213ENST00000549832 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
ERBB3-213ENST00000549832 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
ERBB3-213ENST00000549832 NBR1Q14596 966 aa12.57□□□□□ -0.4
ERBB3-213ENST00000549832 ACIN1Q9UKV3 1341 aaKnown RBP12.56□□□□□ -0.4
ERBB3-213ENST00000549832 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
ERBB3-213ENST00000549832 CTTNBP2Q8WZ74 1663 aa12.55□□□□□ -0.4
ERBB3-213ENST00000549832 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
ERBB3-213ENST00000549832 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
ERBB3-213ENST00000549832 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
ERBB3-213ENST00000549832 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
ERBB3-213ENST00000549832 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
ERBB3-213ENST00000549832 EEA1Q15075 1411 aa12.5□□□□□ -0.41
ERBB3-213ENST00000549832 HS6ST3Q8IZP7 471 aa12.5□□□□□ -0.41
ERBB3-213ENST00000549832 UHRF1BP1LA0JNW5 1464 aa12.5□□□□□ -0.41
ERBB3-213ENST00000549832 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
ERBB3-213ENST00000549832 HOMEZQ8IX15 550 aa12.49□□□□□ -0.41
ERBB3-213ENST00000549832 CEP162Q5TB80 1403 aa12.49□□□□□ -0.41
ERBB3-213ENST00000549832 KIAA0586Q9BVV6 1533 aa12.48□□□□□ -0.41
ERBB3-213ENST00000549832 AQRO60306 1485 aaKnown RBP eCLIP12.48□□□□□ -0.419e-10■■■■□ 26.2
ERBB3-213ENST00000549832 ARAP1Q96P48 1450 aa12.46□□□□□ -0.41
ERBB3-213ENST00000549832 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
ERBB3-213ENST00000549832 GLI2P10070 1586 aa12.46□□□□□ -0.42
ERBB3-213ENST00000549832 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.42
ERBB3-213ENST00000549832 TNIKQ9UKE5 1360 aa12.45□□□□□ -0.42
ERBB3-213ENST00000549832 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
ERBB3-213ENST00000549832 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
ERBB3-213ENST00000549832 KIF21BO75037 1637 aa12.42□□□□□ -0.42
ERBB3-213ENST00000549832 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms