RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 MAGI1Q96QZ7 1491 aaPredicted RBP10.45□□□□□ -0.74
CASC18-202ENST00000548557 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
CASC18-202ENST00000548557 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
CASC18-202ENST00000548557 KIF21BO75037 1637 aa10.44□□□□□ -0.74
CASC18-202ENST00000548557 PIAS4Q8N2W9 510 aaPredicted RBP10.43□□□□□ -0.74
CASC18-202ENST00000548557 RAPGEF2Q9Y4G8 1499 aa10.43□□□□□ -0.74
CASC18-202ENST00000548557 SNAPC4Q5SXM2 1469 aa10.43□□□□□ -0.74
CASC18-202ENST00000548557 GOLGA3Q08378 1498 aa10.41□□□□□ -0.74
CASC18-202ENST00000548557 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
CASC18-202ENST00000548557 ADAMTS12P58397 1594 aa10.41□□□□□ -0.74
CASC18-202ENST00000548557 SYNJ2O15056 1496 aa10.4□□□□□ -0.74
CASC18-202ENST00000548557 CHMP7Q8WUX9 453 aaPredicted RBP10.39□□□□□ -0.75
CASC18-202ENST00000548557 LOC105371045A0A1W2PR82 267 aa10.38□□□□□ -0.75
CASC18-202ENST00000548557 ARXQ96QS3 562 aa10.38□□□□□ -0.75
CASC18-202ENST00000548557 UBTFP17480 764 aaKnown RBP10.37□□□□□ -0.75
CASC18-202ENST00000548557 HRCP23327 699 aa10.37□□□□□ -0.75
CASC18-202ENST00000548557 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
CASC18-202ENST00000548557 TNIKQ9UKE5 1360 aa10.36□□□□□ -0.75
CASC18-202ENST00000548557 FBLN2P98095 1184 aa10.35□□□□□ -0.75
CASC18-202ENST00000548557 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
CASC18-202ENST00000548557 NUP160Q12769 1436 aa10.31□□□□□ -0.76
CASC18-202ENST00000548557 KIAA0586Q9BVV6 1533 aa10.3□□□□□ -0.76
CASC18-202ENST00000548557 CHD1O14646 1710 aa10.29□□□□□ -0.76
CASC18-202ENST00000548557 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
CASC18-202ENST00000548557 CEP170Q5SW79 1584 aa10.27□□□□□ -0.76
CASC18-202ENST00000548557 CTTNBP2Q8WZ74 1663 aa10.27□□□□□ -0.77
CASC18-202ENST00000548557 OSCARQ8IYS5 282 aa10.26□□□□□ -0.77
CASC18-202ENST00000548557 IQGAP2Q13576 1575 aa10.26□□□□□ -0.77
CASC18-202ENST00000548557 CEP162Q5TB80 1403 aa10.25□□□□□ -0.77
CASC18-202ENST00000548557 CLIP1P30622 1438 aa10.23□□□□□ -0.77
CASC18-202ENST00000548557 JPH4Q96JJ6 628 aa10.23□□□□□ -0.77
CASC18-202ENST00000548557 UGGT2Q9NYU1 1516 aa10.22□□□□□ -0.77
CASC18-202ENST00000548557 KCNA4P22459 653 aa10.22□□□□□ -0.77
CASC18-202ENST00000548557 RANGAP1P46060 587 aaPredicted RBP10.22□□□□□ -0.77
CASC18-202ENST00000548557 CLASP1Q7Z460 1538 aa10.22□□□□□ -0.77
CASC18-202ENST00000548557 MSH5O43196 834 aa10.21□□□□□ -0.77
CASC18-202ENST00000548557 EFCAB5A4FU69 1503 aa10.21□□□□□ -0.78
CASC18-202ENST00000548557 EIF5BO60841 1220 aaKnown RBP10.2□□□□□ -0.78
CASC18-202ENST00000548557 ARHGAP35Q9NRY4 1499 aa10.19□□□□□ -0.78
CASC18-202ENST00000548557 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
CASC18-202ENST00000548557 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
CASC18-202ENST00000548557 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
CASC18-202ENST00000548557 SAMD9Q5K651 1589 aa10.17□□□□□ -0.78
CASC18-202ENST00000548557 DISP1Q96F81 1524 aa10.17□□□□□ -0.78
CASC18-202ENST00000548557 PRG4Q92954 1404 aaPredicted RBP10.16□□□□□ -0.78
CASC18-202ENST00000548557 ARAP1Q96P48 1450 aa10.15□□□□□ -0.78
CASC18-202ENST00000548557 KIAA0556O60303 1618 aa10.15□□□□□ -0.79
CASC18-202ENST00000548557 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
CASC18-202ENST00000548557 FMN1Q68DA7 1419 aa10.13□□□□□ -0.79
CASC18-202ENST00000548557 FHOD3Q2V2M9 1422 aa10.13□□□□□ -0.79
CASC18-202ENST00000548557 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
CASC18-202ENST00000548557 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
CASC18-202ENST00000548557 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
CASC18-202ENST00000548557 PTPRGP23470 1445 aa10.09□□□□□ -0.79
CASC18-202ENST00000548557 ERCC6L2Q5T890 1561 aa10.07□□□□□ -0.8
CASC18-202ENST00000548557 CASKIN1Q8WXD9 1431 aa10.07□□□□□ -0.8
CASC18-202ENST00000548557 FYCO1Q9BQS8 1478 aa10.06□□□□□ -0.8
CASC18-202ENST00000548557 ARHGEF11O15085 1522 aa10.05□□□□□ -0.8
CASC18-202ENST00000548557 HOMEZQ8IX15 550 aa10.05□□□□□ -0.8
CASC18-202ENST00000548557 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
CASC18-202ENST00000548557 UACAQ9BZF9 1416 aa10.03□□□□□ -0.8
CASC18-202ENST00000548557 PLB1Q6P1J6 1458 aa10.03□□□□□ -0.8
CASC18-202ENST00000548557 ABCA8O94911 1581 aa10.02□□□□□ -0.8
CASC18-202ENST00000548557 PCF11O94913 1555 aaKnown RBP10.02□□□□□ -0.8
CASC18-202ENST00000548557 RAPGEF6Q8TEU7 1601 aa10.02□□□□□ -0.81
CASC18-202ENST00000548557 MAP3K1Q13233 1512 aa10.01□□□□□ -0.81
CASC18-202ENST00000548557 TAOK2Q9UL54 1235 aa10.01□□□□□ -0.81
CASC18-202ENST00000548557 ATP1B4Q9UN42 357 aaPredicted RBP10.01□□□□□ -0.81
CASC18-202ENST00000548557 HECW1Q76N89 1606 aa10.01□□□□□ -0.81
CASC18-202ENST00000548557 UHRF1BP1LA0JNW5 1464 aa10.01□□□□□ -0.81
CASC18-202ENST00000548557 CCDC18Q5T9S5 1454 aa10□□□□□ -0.81
CASC18-202ENST00000548557 RIMBP3CA6NJZ7 1639 aa10□□□□□ -0.81
CASC18-202ENST00000548557 RIMBP3BA6NNM3 1639 aa10□□□□□ -0.81
CASC18-202ENST00000548557 RIMBP3Q9UFD9 1639 aa10□□□□□ -0.81
CASC18-202ENST00000548557 NUP153P49790 1475 aaKnown RBP10□□□□□ -0.81
CASC18-202ENST00000548557 PPP4R3CPQ6ZMV5 832 aa9.99□□□□□ -0.81
CASC18-202ENST00000548557 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
CASC18-202ENST00000548557 EPRSP07814 1512 aaKnown RBP9.98□□□□□ -0.81
CASC18-202ENST00000548557 ZEB1P37275 1124 aaPredicted RBP9.97□□□□□ -0.81
CASC18-202ENST00000548557 DNAJC5Q9H3Z4 198 aa9.97□□□□□ -0.81
CASC18-202ENST00000548557 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
CASC18-202ENST00000548557 TIAM1Q13009 1591 aa9.96□□□□□ -0.81
CASC18-202ENST00000548557 CYB5RLQ6IPT4 315 aa9.96□□□□□ -0.82
CASC18-202ENST00000548557 ATP10BO94823 1461 aa9.96□□□□□ -0.82
CASC18-202ENST00000548557 KDM5BQ9UGL1 1544 aa9.95□□□□□ -0.82
CASC18-202ENST00000548557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.94□□□□□ -0.82
CASC18-202ENST00000548557 HNRNPUL2Q1KMD3 747 aaKnown RBP9.94□□□□□ -0.82
CASC18-202ENST00000548557 ADCY10Q96PN6 1610 aa9.94□□□□□ -0.82
CASC18-202ENST00000548557 CFAP43Q8NDM7 1665 aa9.94□□□□□ -0.82
CASC18-202ENST00000548557 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
CASC18-202ENST00000548557 CDK13Q14004 1512 aaKnown RBP9.93□□□□□ -0.82
CASC18-202ENST00000548557 LRRC9Q6ZRR7 1453 aa9.93□□□□□ -0.82
CASC18-202ENST00000548557 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
CASC18-202ENST00000548557 PLEKHD1A6NEE1 506 aa9.93□□□□□ -0.82
CASC18-202ENST00000548557 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
CASC18-202ENST00000548557 MTUS2Q5JR59 1369 aa9.93□□□□□ -0.82
CASC18-202ENST00000548557 ARID3CA6NKF2 412 aa9.92□□□□□ -0.82
CASC18-202ENST00000548557 KANK4Q5T7N3 995 aaPredicted RBP9.92□□□□□ -0.82
CASC18-202ENST00000548557 EHBP1L1Q8N3D4 1523 aa9.9□□□□□ -0.82
CASC18-202ENST00000548557 TROQ12816 1431 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms