RNA–Protein interactions for RNA: ENST00000548123.1

RDH5-205, Transcript of retinol dehydrogenase 5, humanhuman

TSL 3

Gene RDH5, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5-205ENST00000548123 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
RDH5-205ENST00000548123 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
RDH5-205ENST00000548123 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
RDH5-205ENST00000548123 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
RDH5-205ENST00000548123 KIF21BO75037 1637 aa24.89■■□□□ 1.57
RDH5-205ENST00000548123 JPH4Q96JJ6 628 aa24.88■■□□□ 1.57
RDH5-205ENST00000548123 CTTNBP2Q8WZ74 1663 aa24.87■■□□□ 1.57
RDH5-205ENST00000548123 IQGAP2Q13576 1575 aa24.86■■□□□ 1.57
RDH5-205ENST00000548123 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
RDH5-205ENST00000548123 PRG4Q92954 1404 aaPredicted RBP24.81■■□□□ 1.56
RDH5-205ENST00000548123 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
RDH5-205ENST00000548123 UGGT2Q9NYU1 1516 aa24.75■■□□□ 1.55
RDH5-205ENST00000548123 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
RDH5-205ENST00000548123 CYB5RLQ6IPT4 315 aa24.71■■□□□ 1.55
RDH5-205ENST00000548123 CARMIL2Q6F5E8 1435 aa24.68■■□□□ 1.54
RDH5-205ENST00000548123 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
RDH5-205ENST00000548123 KIAA0556O60303 1618 aa24.62■■□□□ 1.53
RDH5-205ENST00000548123 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
RDH5-205ENST00000548123 EHMT2Q96KQ7 1210 aa24.6■■□□□ 1.53
RDH5-205ENST00000548123 TNIKQ9UKE5 1360 aa24.59■■□□□ 1.53
RDH5-205ENST00000548123 SAMD9Q5K651 1589 aa24.54■■□□□ 1.52
RDH5-205ENST00000548123 PTPRGP23470 1445 aa24.54■■□□□ 1.52
RDH5-205ENST00000548123 EFCAB5A4FU69 1503 aa24.47■■□□□ 1.51
RDH5-205ENST00000548123 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
RDH5-205ENST00000548123 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
RDH5-205ENST00000548123 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
RDH5-205ENST00000548123 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
RDH5-205ENST00000548123 UACAQ9BZF9 1416 aa24.39■■□□□ 1.5
RDH5-205ENST00000548123 UHRF1BP1LA0JNW5 1464 aa24.38■■□□□ 1.49
RDH5-205ENST00000548123 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
RDH5-205ENST00000548123 FHOD3Q2V2M9 1422 aa24.36■■□□□ 1.49
RDH5-205ENST00000548123 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
RDH5-205ENST00000548123 ABCA8O94911 1581 aa24.35■■□□□ 1.49
RDH5-205ENST00000548123 LOC105371045A0A1W2PR82 267 aa24.34■■□□□ 1.49
RDH5-205ENST00000548123 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.49
RDH5-205ENST00000548123 NPM1P06748 294 aaKnown RBP eCLIP24.29■■□□□ 1.48
RDH5-205ENST00000548123 CLIP1P30622 1438 aa24.27■■□□□ 1.48
RDH5-205ENST00000548123 KDM5BQ9UGL1 1544 aa24.26■■□□□ 1.47
RDH5-205ENST00000548123 RAPGEF6Q8TEU7 1601 aa24.26■■□□□ 1.47
RDH5-205ENST00000548123 MAPKBP1O60336 1514 aa24.24■■□□□ 1.47
RDH5-205ENST00000548123 FMN1Q68DA7 1419 aa24.23■■□□□ 1.47
RDH5-205ENST00000548123 CEP162Q5TB80 1403 aa24.22■■□□□ 1.47
RDH5-205ENST00000548123 ZCCHC11Q5TAX3 1644 aaKnown RBP24.21■■□□□ 1.47
RDH5-205ENST00000548123 NUP153P49790 1475 aaKnown RBP24.16■■□□□ 1.46
RDH5-205ENST00000548123 ATP10BO94823 1461 aa24.13■■□□□ 1.45
RDH5-205ENST00000548123 ASXL2Q76L83 1435 aa24.12■■□□□ 1.45
RDH5-205ENST00000548123 TRHP20396 242 aaPredicted RBP24.11■■□□□ 1.45
RDH5-205ENST00000548123 KIF13AQ9H1H9 1805 aa24.1■■□□□ 1.45
RDH5-205ENST00000548123 HECW1Q76N89 1606 aa24.1■■□□□ 1.45
RDH5-205ENST00000548123 ABCC10Q5T3U5 1492 aa24.09■■□□□ 1.45
RDH5-205ENST00000548123 DIP2BQ9P265 1576 aa24.07■■□□□ 1.44
RDH5-205ENST00000548123 ARID3CA6NKF2 412 aa24.06■■□□□ 1.44
RDH5-205ENST00000548123 CASKIN1Q8WXD9 1431 aa24.06■■□□□ 1.44
RDH5-205ENST00000548123 PCF11O94913 1555 aaKnown RBP24.06■■□□□ 1.44
RDH5-205ENST00000548123 WDR7Q9Y4E6 1490 aa24.05■■□□□ 1.44
RDH5-205ENST00000548123 FYCO1Q9BQS8 1478 aa24.02■■□□□ 1.44
RDH5-205ENST00000548123 EPRSP07814 1512 aaKnown RBP24.02■■□□□ 1.44
RDH5-205ENST00000548123 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
RDH5-205ENST00000548123 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
RDH5-205ENST00000548123 ATP1B4Q9UN42 357 aaPredicted RBP24■■□□□ 1.43
RDH5-205ENST00000548123 CDK13Q14004 1512 aaKnown RBP24■■□□□ 1.43
RDH5-205ENST00000548123 GLI2P10070 1586 aa23.99■■□□□ 1.43
RDH5-205ENST00000548123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.99■■□□□ 1.43
RDH5-205ENST00000548123 HNRNPUL2Q1KMD3 747 aaKnown RBP23.99■■□□□ 1.43
RDH5-205ENST00000548123 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
RDH5-205ENST00000548123 PLEKHD1A6NEE1 506 aa23.93■■□□□ 1.42
RDH5-205ENST00000548123 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
RDH5-205ENST00000548123 KCNH8Q96L42 1107 aa23.91■■□□□ 1.42
RDH5-205ENST00000548123 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
RDH5-205ENST00000548123 CDK11AQ9UQ88 783 aaPredicted RBP23.89■■□□□ 1.41
RDH5-205ENST00000548123 TSPOAP1O95153 1857 aa23.88■■□□□ 1.41
RDH5-205ENST00000548123 CFAP43Q8NDM7 1665 aa23.87■■□□□ 1.41
RDH5-205ENST00000548123 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
RDH5-205ENST00000548123 TROQ12816 1431 aaPredicted RBP23.83■■□□□ 1.4
RDH5-205ENST00000548123 PPRC1Q5VV67 1664 aaKnown RBP23.83■■□□□ 1.4
RDH5-205ENST00000548123 CD109Q6YHK3 1445 aa23.79■■□□□ 1.4
RDH5-205ENST00000548123 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
RDH5-205ENST00000548123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.77■■□□□ 1.4
RDH5-205ENST00000548123 KIF14Q15058 1648 aa23.76■■□□□ 1.39
RDH5-205ENST00000548123 TEX14Q8IWB6 1497 aa23.74■■□□□ 1.39
RDH5-205ENST00000548123 TIAM1Q13009 1591 aa23.74■■□□□ 1.39
RDH5-205ENST00000548123 TTC37Q6PGP7 1564 aa23.74■■□□□ 1.39
RDH5-205ENST00000548123 MAP3K1Q13233 1512 aa23.73■■□□□ 1.39
RDH5-205ENST00000548123 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.38
RDH5-205ENST00000548123 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
RDH5-205ENST00000548123 MYO5CQ9NQX4 1742 aa23.67■■□□□ 1.38
RDH5-205ENST00000548123 PLCH2O75038 1416 aa23.64■■□□□ 1.37
RDH5-205ENST00000548123 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
RDH5-205ENST00000548123 LRRC9Q6ZRR7 1453 aa23.62■■□□□ 1.37
RDH5-205ENST00000548123 NEO1Q92859 1461 aa23.62■■□□□ 1.37
RDH5-205ENST00000548123 APLP2Q06481 763 aa23.61■■□□□ 1.37
RDH5-205ENST00000548123 KDM6BO15054 1643 aa23.61■■□□□ 1.37
RDH5-205ENST00000548123 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
RDH5-205ENST00000548123 CFAP74Q9C0B2 1584 aa23.6■■□□□ 1.37
RDH5-205ENST00000548123 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
RDH5-205ENST00000548123 CDC42BPBQ9Y5S2 1711 aa23.59■■□□□ 1.37
RDH5-205ENST00000548123 SUPT6HQ7KZ85 1726 aaKnown RBP23.59■■□□□ 1.37
RDH5-205ENST00000548123 FANCAO15360 1455 aa23.58■■□□□ 1.37
RDH5-205ENST00000548123 PREX2Q70Z35 1606 aa23.58■■□□□ 1.36
RDH5-205ENST00000548123 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms