RNA–Protein interactions for RNA: ENST00000546822.1

TFCP2-202, Transcript of transcription factor CP2, humanhuman

TSL 3

Gene TFCP2, Length 794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2-202ENST00000546822 FANCD2Q9BXW9 1451 aa13.73□□□□□ -0.21
TFCP2-202ENST00000546822 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
TFCP2-202ENST00000546822 HRCP23327 699 aa13.72□□□□□ -0.21
TFCP2-202ENST00000546822 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
TFCP2-202ENST00000546822 PEG3Q9GZU2 1588 aa13.7□□□□□ -0.22
TFCP2-202ENST00000546822 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
TFCP2-202ENST00000546822 NBR1Q14596 966 aa13.64□□□□□ -0.23
TFCP2-202ENST00000546822 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.64□□□□□ -0.23
TFCP2-202ENST00000546822 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
TFCP2-202ENST00000546822 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
TFCP2-202ENST00000546822 FBXO41Q8TF61 875 aa13.58□□□□□ -0.24
TFCP2-202ENST00000546822 IFT140Q96RY7 1462 aa13.58□□□□□ -0.24
TFCP2-202ENST00000546822 CHD1O14646 1710 aa13.57□□□□□ -0.24
TFCP2-202ENST00000546822 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
TFCP2-202ENST00000546822 LOC105371045A0A1W2PR82 267 aa13.53□□□□□ -0.24
TFCP2-202ENST00000546822 LMTK3Q96Q04 1460 aa13.52□□□□□ -0.25
TFCP2-202ENST00000546822 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
TFCP2-202ENST00000546822 CFTRP13569 1480 aa13.5□□□□□ -0.25
TFCP2-202ENST00000546822 SOCS7O14512 581 aa13.5□□□□□ -0.25
TFCP2-202ENST00000546822 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
TFCP2-202ENST00000546822 MSH5O43196 834 aa13.49□□□□□ -0.25
TFCP2-202ENST00000546822 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
TFCP2-202ENST00000546822 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
TFCP2-202ENST00000546822 ILDR2Q71H61 639 aa13.46□□□□□ -0.25
TFCP2-202ENST00000546822 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
TFCP2-202ENST00000546822 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
TFCP2-202ENST00000546822 GAPVD1Q14C86 1478 aa13.43□□□□□ -0.26
TFCP2-202ENST00000546822 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
TFCP2-202ENST00000546822 HECW2Q9P2P5 1572 aa13.39□□□□□ -0.27
TFCP2-202ENST00000546822 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
TFCP2-202ENST00000546822 PKD2Q13563 968 aa13.35□□□□□ -0.27
TFCP2-202ENST00000546822 CCDC9Q9Y3X0 531 aaKnown RBP13.35□□□□□ -0.27
TFCP2-202ENST00000546822 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
TFCP2-202ENST00000546822 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
TFCP2-202ENST00000546822 KIF13AQ9H1H9 1805 aa13.33□□□□□ -0.28
TFCP2-202ENST00000546822 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
TFCP2-202ENST00000546822 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
TFCP2-202ENST00000546822 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
TFCP2-202ENST00000546822 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
TFCP2-202ENST00000546822 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
TFCP2-202ENST00000546822 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
TFCP2-202ENST00000546822 FAM69CQ0P6D2 419 aa13.28□□□□□ -0.28
TFCP2-202ENST00000546822 ADGRL1O94910 1474 aa13.25□□□□□ -0.29
TFCP2-202ENST00000546822 SNAPC4Q5SXM2 1469 aa13.25□□□□□ -0.29
TFCP2-202ENST00000546822 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
TFCP2-202ENST00000546822 DISP3Q9P2K9 1392 aa13.24□□□□□ -0.29
TFCP2-202ENST00000546822 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
TFCP2-202ENST00000546822 WIZO95785 1651 aa13.24□□□□□ -0.29
TFCP2-202ENST00000546822 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
TFCP2-202ENST00000546822 KDM6BO15054 1643 aa13.21□□□□□ -0.29
TFCP2-202ENST00000546822 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
TFCP2-202ENST00000546822 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
TFCP2-202ENST00000546822 ABCC10Q5T3U5 1492 aa13.18□□□□□ -0.3
TFCP2-202ENST00000546822 ZBTB7CA1YPR0 619 aa13.17□□□□□ -0.3
TFCP2-202ENST00000546822 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
TFCP2-202ENST00000546822 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
TFCP2-202ENST00000546822 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
TFCP2-202ENST00000546822 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
TFCP2-202ENST00000546822 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
TFCP2-202ENST00000546822 HSP90B1P14625 803 aaKnown RBP13.12□□□□□ -0.31
TFCP2-202ENST00000546822 SOGA1O94964 1423 aa13.09□□□□□ -0.31
TFCP2-202ENST00000546822 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
TFCP2-202ENST00000546822 IGSF3O75054 1194 aa13.07□□□□□ -0.32
TFCP2-202ENST00000546822 IFNLR1Q8IU57 520 aaPredicted RBP13.07□□□□□ -0.32
TFCP2-202ENST00000546822 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
TFCP2-202ENST00000546822 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
TFCP2-202ENST00000546822 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
TFCP2-202ENST00000546822 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
TFCP2-202ENST00000546822 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
TFCP2-202ENST00000546822 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
TFCP2-202ENST00000546822 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
TFCP2-202ENST00000546822 TSPOAP1O95153 1857 aa13.02□□□□□ -0.33
TFCP2-202ENST00000546822 PDIA4P13667 645 aaKnown RBP13.01□□□□□ -0.33
TFCP2-202ENST00000546822 PUS7Q96PZ0 661 aaKnown RBP13.01□□□□□ -0.33
TFCP2-202ENST00000546822 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
TFCP2-202ENST00000546822 MAPKBP1O60336 1514 aa12.99□□□□□ -0.33
TFCP2-202ENST00000546822 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
TFCP2-202ENST00000546822 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
TFCP2-202ENST00000546822 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
TFCP2-202ENST00000546822 COL17A1Q9UMD9 1497 aaPredicted RBP12.94□□□□□ -0.34
TFCP2-202ENST00000546822 CERKQ8TCT0 537 aa12.93□□□□□ -0.34
TFCP2-202ENST00000546822 NECTIN2Q92692 538 aa12.93□□□□□ -0.34
TFCP2-202ENST00000546822 CCDC88BA6NC98 1476 aa12.92□□□□□ -0.34
TFCP2-202ENST00000546822 SPATA31D1Q6ZQQ2 1576 aa12.91□□□□□ -0.34
TFCP2-202ENST00000546822 ARID3AQ99856 593 aa12.91□□□□□ -0.34
TFCP2-202ENST00000546822 SHROOM2Q13796 1616 aa12.91□□□□□ -0.34
TFCP2-202ENST00000546822 NUP160Q12769 1436 aa12.9□□□□□ -0.34
TFCP2-202ENST00000546822 FGD5Q6ZNL6 1462 aa12.9□□□□□ -0.34
TFCP2-202ENST00000546822 PRG4Q92954 1404 aaPredicted RBP12.89□□□□□ -0.35
TFCP2-202ENST00000546822 GRIN2AQ12879 1464 aa12.89□□□□□ -0.35
TFCP2-202ENST00000546822 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
TFCP2-202ENST00000546822 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
TFCP2-202ENST00000546822 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
TFCP2-202ENST00000546822 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
TFCP2-202ENST00000546822 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
TFCP2-202ENST00000546822 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
TFCP2-202ENST00000546822 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
TFCP2-202ENST00000546822 PBRM1Q86U86 1689 aa12.83□□□□□ -0.35
TFCP2-202ENST00000546822 PPRC1Q5VV67 1664 aaKnown RBP12.82□□□□□ -0.36
TFCP2-202ENST00000546822 C1orf115Q9H7X2 142 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms