RNA–Protein interactions for RNA: ENST00000546822.1

TFCP2-202, Transcript of transcription factor CP2, humanhuman

TSL 3

Gene TFCP2, Length 794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2-202ENST00000546822 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
TFCP2-202ENST00000546822 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.52
TFCP2-202ENST00000546822 SLC24A1O60721 1099 aa18■□□□□ 0.47
TFCP2-202ENST00000546822 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
TFCP2-202ENST00000546822 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
TFCP2-202ENST00000546822 ABCC9O60706 1549 aa17.26■□□□□ 0.35
TFCP2-202ENST00000546822 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
TFCP2-202ENST00000546822 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
TFCP2-202ENST00000546822 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
TFCP2-202ENST00000546822 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
TFCP2-202ENST00000546822 RTN4Q9NQC3 1192 aaKnown RBP16.31■□□□□ 0.2
TFCP2-202ENST00000546822 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
TFCP2-202ENST00000546822 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
TFCP2-202ENST00000546822 DAXXQ9UER7 740 aaPredicted RBP16.23■□□□□ 0.19
TFCP2-202ENST00000546822 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
TFCP2-202ENST00000546822 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
TFCP2-202ENST00000546822 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
TFCP2-202ENST00000546822 KCNA4P22459 653 aa15.91■□□□□ 0.14
TFCP2-202ENST00000546822 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
TFCP2-202ENST00000546822 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
TFCP2-202ENST00000546822 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
TFCP2-202ENST00000546822 ARXQ96QS3 562 aa15.53■□□□□ 0.08
TFCP2-202ENST00000546822 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
TFCP2-202ENST00000546822 NACADO15069 1562 aa15.49■□□□□ 0.07
TFCP2-202ENST00000546822 CC2D2AQ9P2K1 1620 aa15.48■□□□□ 0.07
TFCP2-202ENST00000546822 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
TFCP2-202ENST00000546822 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
TFCP2-202ENST00000546822 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
TFCP2-202ENST00000546822 DCAF8L2P0C7V8 631 aa15.35■□□□□ 0.05
TFCP2-202ENST00000546822 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
TFCP2-202ENST00000546822 TTBK1Q5TCY1 1321 aaPredicted RBP15.28■□□□□ 0.04
TFCP2-202ENST00000546822 CUX2O14529 1486 aa15.24■□□□□ 0.03
TFCP2-202ENST00000546822 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
TFCP2-202ENST00000546822 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
TFCP2-202ENST00000546822 BCANQ96GW7 911 aa15.14■□□□□ 0.01
TFCP2-202ENST00000546822 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
TFCP2-202ENST00000546822 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
TFCP2-202ENST00000546822 APLP2Q06481 763 aa15.07■□□□□ 0
TFCP2-202ENST00000546822 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
TFCP2-202ENST00000546822 HOMEZQ8IX15 550 aa14.98□□□□□ -0.01
TFCP2-202ENST00000546822 MYT1Q01538 1121 aa14.97□□□□□ -0.01
TFCP2-202ENST00000546822 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
TFCP2-202ENST00000546822 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
TFCP2-202ENST00000546822 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
TFCP2-202ENST00000546822 RANGAP1P46060 587 aaPredicted RBP14.9□□□□□ -0.02
TFCP2-202ENST00000546822 PLCB2Q00722 1185 aa14.87□□□□□ -0.03
TFCP2-202ENST00000546822 TPRNQ4KMQ1 711 aa14.84□□□□□ -0.03
TFCP2-202ENST00000546822 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
TFCP2-202ENST00000546822 GTF3C3Q9Y5Q9 886 aa14.7□□□□□ -0.06
TFCP2-202ENST00000546822 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
TFCP2-202ENST00000546822 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
TFCP2-202ENST00000546822 ADRA2BP18089 450 aa14.58□□□□□ -0.08
TFCP2-202ENST00000546822 ZBTB22O15209 634 aa14.56□□□□□ -0.08
TFCP2-202ENST00000546822 VSIG10Q8N0Z9 540 aa14.56□□□□□ -0.08
TFCP2-202ENST00000546822 NESP48681 1621 aa14.53□□□□□ -0.08
TFCP2-202ENST00000546822 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
TFCP2-202ENST00000546822 FOXD1Q16676 465 aa14.47□□□□□ -0.09
TFCP2-202ENST00000546822 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
TFCP2-202ENST00000546822 PODXL2Q9NZ53 605 aa14.44□□□□□ -0.1
TFCP2-202ENST00000546822 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
TFCP2-202ENST00000546822 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
TFCP2-202ENST00000546822 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
TFCP2-202ENST00000546822 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
TFCP2-202ENST00000546822 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
TFCP2-202ENST00000546822 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.12
TFCP2-202ENST00000546822 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
TFCP2-202ENST00000546822 BAZ1AQ9NRL2 1556 aaPredicted RBP14.32□□□□□ -0.12
TFCP2-202ENST00000546822 RIMBP3CA6NJZ7 1639 aa14.3□□□□□ -0.12
TFCP2-202ENST00000546822 RIMBP3BA6NNM3 1639 aa14.3□□□□□ -0.12
TFCP2-202ENST00000546822 RIMBP3Q9UFD9 1639 aa14.3□□□□□ -0.12
TFCP2-202ENST00000546822 FKBP8Q14318 412 aa14.29□□□□□ -0.12
TFCP2-202ENST00000546822 CYB5RLQ6IPT4 315 aa14.24□□□□□ -0.13
TFCP2-202ENST00000546822 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
TFCP2-202ENST00000546822 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
TFCP2-202ENST00000546822 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
TFCP2-202ENST00000546822 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
TFCP2-202ENST00000546822 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
TFCP2-202ENST00000546822 C14orf37Q86TY3 774 aa14.18□□□□□ -0.14
TFCP2-202ENST00000546822 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
TFCP2-202ENST00000546822 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
TFCP2-202ENST00000546822 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
TFCP2-202ENST00000546822 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
TFCP2-202ENST00000546822 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
TFCP2-202ENST00000546822 HMGXB3Q12766 1538 aa14.09□□□□□ -0.15
TFCP2-202ENST00000546822 MRC2Q9UBG0 1479 aa14.08□□□□□ -0.16
TFCP2-202ENST00000546822 WDR62O43379 1518 aa14.07□□□□□ -0.16
TFCP2-202ENST00000546822 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.17
TFCP2-202ENST00000546822 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
TFCP2-202ENST00000546822 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
TFCP2-202ENST00000546822 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
TFCP2-202ENST00000546822 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
TFCP2-202ENST00000546822 CADPSQ9ULU8 1353 aa13.91□□□□□ -0.18
TFCP2-202ENST00000546822 FBLN2P98095 1184 aa13.9□□□□□ -0.18
TFCP2-202ENST00000546822 TRIM26Q12899 539 aaPredicted RBP13.87□□□□□ -0.19
TFCP2-202ENST00000546822 SMARCA4P51532 1647 aa13.83□□□□□ -0.2
TFCP2-202ENST00000546822 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
TFCP2-202ENST00000546822 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
TFCP2-202ENST00000546822 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
TFCP2-202ENST00000546822 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
TFCP2-202ENST00000546822 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms