RNA–Protein interactions for RNA: ENST00000546455.5

PCED1B-202, Transcript of PC-esterase domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCED1B, Length 2,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-202ENST00000546455 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
PCED1B-202ENST00000546455 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
PCED1B-202ENST00000546455 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
PCED1B-202ENST00000546455 LRRC9Q6ZRR7 1453 aa22.78■■□□□ 1.24
PCED1B-202ENST00000546455 PHLDB1Q86UU1 1377 aa22.77■■□□□ 1.23
PCED1B-202ENST00000546455 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
PCED1B-202ENST00000546455 FHOD3Q2V2M9 1422 aa22.75■■□□□ 1.23
PCED1B-202ENST00000546455 MAP3K1Q13233 1512 aa22.74■■□□□ 1.23
PCED1B-202ENST00000546455 ABCA10Q8WWZ4 1543 aa22.74■■□□□ 1.23
PCED1B-202ENST00000546455 PCF11O94913 1555 aaKnown RBP22.73■■□□□ 1.23
PCED1B-202ENST00000546455 FAM50AQ14320 339 aaKnown RBP22.73■■□□□ 1.23
PCED1B-202ENST00000546455 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
PCED1B-202ENST00000546455 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
PCED1B-202ENST00000546455 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
PCED1B-202ENST00000546455 MAPKBP1O60336 1514 aa22.63■■□□□ 1.21
PCED1B-202ENST00000546455 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
PCED1B-202ENST00000546455 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
PCED1B-202ENST00000546455 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
PCED1B-202ENST00000546455 CUL7Q14999 1698 aa22.58■■□□□ 1.21
PCED1B-202ENST00000546455 FYCO1Q9BQS8 1478 aa22.57■■□□□ 1.2
PCED1B-202ENST00000546455 EFCAB5A4FU69 1503 aa22.56■■□□□ 1.2
PCED1B-202ENST00000546455 CASKIN1Q8WXD9 1431 aa22.56■■□□□ 1.2
PCED1B-202ENST00000546455 SIN3AQ96ST3 1273 aa22.56■■□□□ 1.2
PCED1B-202ENST00000546455 CTTNBP2Q8WZ74 1663 aa22.53■■□□□ 1.2
PCED1B-202ENST00000546455 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
PCED1B-202ENST00000546455 WDR97A6NE52 1622 aa22.5■■□□□ 1.19
PCED1B-202ENST00000546455 AQRO60306 1485 aaKnown RBP eCLIP22.49■■□□□ 1.19
PCED1B-202ENST00000546455 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
PCED1B-202ENST00000546455 FMN1Q68DA7 1419 aa22.47■■□□□ 1.19
PCED1B-202ENST00000546455 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
PCED1B-202ENST00000546455 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
PCED1B-202ENST00000546455 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
PCED1B-202ENST00000546455 MTUS2Q5JR59 1369 aa22.43■■□□□ 1.18
PCED1B-202ENST00000546455 FGD6Q6ZV73 1430 aa22.41■■□□□ 1.18
PCED1B-202ENST00000546455 SAMD9Q5K651 1589 aa22.37■■□□□ 1.17
PCED1B-202ENST00000546455 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
PCED1B-202ENST00000546455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCED1B-202ENST00000546455 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
PCED1B-202ENST00000546455 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
PCED1B-202ENST00000546455 LRRIQ1Q96JM4 1722 aa22.35■■□□□ 1.17
PCED1B-202ENST00000546455 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
PCED1B-202ENST00000546455 GRIN2BQ13224 1484 aa22.33■■□□□ 1.17
PCED1B-202ENST00000546455 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
PCED1B-202ENST00000546455 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
PCED1B-202ENST00000546455 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
PCED1B-202ENST00000546455 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
PCED1B-202ENST00000546455 PPP1R15AO75807 674 aaPredicted RBP22.26■■□□□ 1.15
PCED1B-202ENST00000546455 MYOM3Q5VTT5 1437 aa22.26■■□□□ 1.15
PCED1B-202ENST00000546455 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
PCED1B-202ENST00000546455 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
PCED1B-202ENST00000546455 MAGI3Q5TCQ9 1506 aa22.23■■□□□ 1.15
PCED1B-202ENST00000546455 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
PCED1B-202ENST00000546455 PTPN23Q9H3S7 1636 aa22.22■■□□□ 1.15
PCED1B-202ENST00000546455 NAIPQ13075 1403 aa22.2■■□□□ 1.14
PCED1B-202ENST00000546455 EHBP1L1Q8N3D4 1523 aa22.2■■□□□ 1.14
PCED1B-202ENST00000546455 SUPT6HQ7KZ85 1726 aaKnown RBP22.2■■□□□ 1.14
PCED1B-202ENST00000546455 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
PCED1B-202ENST00000546455 CHIC2Q9UKJ5 165 aa22.19■■□□□ 1.14
PCED1B-202ENST00000546455 TONSLQ96HA7 1378 aa22.19■■□□□ 1.14
PCED1B-202ENST00000546455 UACAQ9BZF9 1416 aa22.18■■□□□ 1.14
PCED1B-202ENST00000546455 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
PCED1B-202ENST00000546455 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
PCED1B-202ENST00000546455 UGGT2Q9NYU1 1516 aa22.16■■□□□ 1.14
PCED1B-202ENST00000546455 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
PCED1B-202ENST00000546455 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
PCED1B-202ENST00000546455 ARHGEF11O15085 1522 aa22.12■■□□□ 1.13
PCED1B-202ENST00000546455 CDK13Q14004 1512 aaKnown RBP22.12■■□□□ 1.13
PCED1B-202ENST00000546455 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
PCED1B-202ENST00000546455 MRC2Q9UBG0 1479 aa22.1■■□□□ 1.13
PCED1B-202ENST00000546455 EPRSP07814 1512 aaKnown RBP22.1■■□□□ 1.13
PCED1B-202ENST00000546455 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
PCED1B-202ENST00000546455 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
PCED1B-202ENST00000546455 TRIM52Q96A61 297 aa22.06■■□□□ 1.12
PCED1B-202ENST00000546455 TCOF1Q13428 1488 aaKnown RBP22.04■■□□□ 1.12
PCED1B-202ENST00000546455 WDR62O43379 1518 aa22.02■■□□□ 1.12
PCED1B-202ENST00000546455 KDM6BO15054 1643 aa22.01■■□□□ 1.11
PCED1B-202ENST00000546455 ANP32CO43423 234 aa22■■□□□ 1.11
PCED1B-202ENST00000546455 ERCC6Q03468 1493 aa22■■□□□ 1.11
PCED1B-202ENST00000546455 DENND4BO75064 1496 aaPredicted RBP21.99■■□□□ 1.11
PCED1B-202ENST00000546455 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
PCED1B-202ENST00000546455 FOXD1Q16676 465 aa21.97■■□□□ 1.11
PCED1B-202ENST00000546455 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
PCED1B-202ENST00000546455 GCC2Q8IWJ2 1684 aa21.94■■□□□ 1.1
PCED1B-202ENST00000546455 MIA2Q96PC5 1412 aa21.94■■□□□ 1.1
PCED1B-202ENST00000546455 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
PCED1B-202ENST00000546455 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
PCED1B-202ENST00000546455 MPHOSPH9Q99550 1183 aa21.92■■□□□ 1.1
PCED1B-202ENST00000546455 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
PCED1B-202ENST00000546455 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
PCED1B-202ENST00000546455 BCANQ96GW7 911 aa21.9■■□□□ 1.1
PCED1B-202ENST00000546455 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
PCED1B-202ENST00000546455 AKNAQ7Z591 1439 aa21.89■■□□□ 1.09
PCED1B-202ENST00000546455 NUP153P49790 1475 aaKnown RBP21.89■■□□□ 1.09
PCED1B-202ENST00000546455 HSPA5P11021 654 aaKnown RBP21.88■■□□□ 1.09
PCED1B-202ENST00000546455 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
PCED1B-202ENST00000546455 DAPK1P53355 1430 aa21.86■■□□□ 1.09
PCED1B-202ENST00000546455 FKBP8Q14318 412 aa21.85■■□□□ 1.09
PCED1B-202ENST00000546455 L3MBTL2Q969R5 705 aa21.84■■□□□ 1.09
PCED1B-202ENST00000546455 EIF4G3O43432 1585 aaKnown RBP21.84■■□□□ 1.09
PCED1B-202ENST00000546455 ABCC5O15440 1437 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms