RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 GOLGA3Q08378 1498 aa26.7■■□□□ 1.87
PPP1CA-211ENST00000546202 CHMP7Q8WUX9 453 aaPredicted RBP26.69■■□□□ 1.86
PPP1CA-211ENST00000546202 FBLN2P98095 1184 aa26.63■■□□□ 1.85
PPP1CA-211ENST00000546202 ARAP1Q96P48 1450 aa26.62■■□□□ 1.85
PPP1CA-211ENST00000546202 NUP160Q12769 1436 aa26.59■■□□□ 1.85
PPP1CA-211ENST00000546202 CTTNBP2Q8WZ74 1663 aa26.59■■□□□ 1.85
PPP1CA-211ENST00000546202 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
PPP1CA-211ENST00000546202 LOC105371045A0A1W2PR82 267 aa26.54■■□□□ 1.84
PPP1CA-211ENST00000546202 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
PPP1CA-211ENST00000546202 UBTFP17480 764 aaKnown RBP26.5■■□□□ 1.83
PPP1CA-211ENST00000546202 KIAA0586Q9BVV6 1533 aa26.49■■□□□ 1.83
PPP1CA-211ENST00000546202 TNIKQ9UKE5 1360 aa26.47■■□□□ 1.83
PPP1CA-211ENST00000546202 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
PPP1CA-211ENST00000546202 IQGAP2Q13576 1575 aa26.46■■□□□ 1.83
PPP1CA-211ENST00000546202 SHROOM2Q13796 1616 aa26.36■■□□□ 1.81
PPP1CA-211ENST00000546202 UGGT2Q9NYU1 1516 aa26.34■■□□□ 1.81
PPP1CA-211ENST00000546202 AEBP2Q6ZN18 517 aaPredicted RBP26.33■■□□□ 1.81
PPP1CA-211ENST00000546202 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
PPP1CA-211ENST00000546202 SAMD9Q5K651 1589 aa26.26■■□□□ 1.79
PPP1CA-211ENST00000546202 CEP162Q5TB80 1403 aa26.26■■□□□ 1.79
PPP1CA-211ENST00000546202 EFCAB5A4FU69 1503 aa26.24■■□□□ 1.79
PPP1CA-211ENST00000546202 CLIP1P30622 1438 aa26.22■■□□□ 1.79
PPP1CA-211ENST00000546202 DISP1Q96F81 1524 aa26.21■■□□□ 1.79
PPP1CA-211ENST00000546202 KIAA0556O60303 1618 aa26.2■■□□□ 1.78
PPP1CA-211ENST00000546202 ARHGAP35Q9NRY4 1499 aa26.19■■□□□ 1.78
PPP1CA-211ENST00000546202 RANGAP1P46060 587 aaPredicted RBP26.18■■□□□ 1.78
PPP1CA-211ENST00000546202 PRG4Q92954 1404 aaPredicted RBP26.18■■□□□ 1.78
PPP1CA-211ENST00000546202 CARMIL2Q6F5E8 1435 aa26.15■■□□□ 1.78
PPP1CA-211ENST00000546202 ERCC6L2Q5T890 1561 aa26.14■■□□□ 1.78
PPP1CA-211ENST00000546202 FHOD3Q2V2M9 1422 aa26.05■■□□□ 1.76
PPP1CA-211ENST00000546202 P3H3Q8IVL6 736 aa26.04■■□□□ 1.76
PPP1CA-211ENST00000546202 PTPRGP23470 1445 aa25.95■■□□□ 1.74
PPP1CA-211ENST00000546202 FMN1Q68DA7 1419 aa25.95■■□□□ 1.74
PPP1CA-211ENST00000546202 VPS8Q8N3P4 1428 aa25.91■■□□□ 1.74
PPP1CA-211ENST00000546202 ABCA8O94911 1581 aa25.87■■□□□ 1.73
PPP1CA-211ENST00000546202 PCF11O94913 1555 aaKnown RBP25.86■■□□□ 1.73
PPP1CA-211ENST00000546202 RAPGEF6Q8TEU7 1601 aa25.86■■□□□ 1.73
PPP1CA-211ENST00000546202 TTBK1Q5TCY1 1321 aaPredicted RBP25.85■■□□□ 1.73
PPP1CA-211ENST00000546202 PLB1Q6P1J6 1458 aa25.84■■□□□ 1.73
PPP1CA-211ENST00000546202 CASKIN1Q8WXD9 1431 aa25.83■■□□□ 1.73
PPP1CA-211ENST00000546202 FYCO1Q9BQS8 1478 aa25.82■■□□□ 1.72
PPP1CA-211ENST00000546202 UACAQ9BZF9 1416 aa25.8■■□□□ 1.72
PPP1CA-211ENST00000546202 HECW1Q76N89 1606 aa25.79■■□□□ 1.72
PPP1CA-211ENST00000546202 UHRF1BP1LA0JNW5 1464 aa25.79■■□□□ 1.72
PPP1CA-211ENST00000546202 ABCC2Q92887 1545 aa25.78■■□□□ 1.72
PPP1CA-211ENST00000546202 ADCY10Q96PN6 1610 aa25.76■■□□□ 1.71
PPP1CA-211ENST00000546202 LRRIQ1Q96JM4 1722 aa25.76■■□□□ 1.71
PPP1CA-211ENST00000546202 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
PPP1CA-211ENST00000546202 EPRSP07814 1512 aaKnown RBP25.68■■□□□ 1.7
PPP1CA-211ENST00000546202 CCDC18Q5T9S5 1454 aa25.66■■□□□ 1.7
PPP1CA-211ENST00000546202 CFAP43Q8NDM7 1665 aa25.66■■□□□ 1.7
PPP1CA-211ENST00000546202 KDM5BQ9UGL1 1544 aa25.65■■□□□ 1.7
PPP1CA-211ENST00000546202 ATP1B4Q9UN42 357 aaPredicted RBP25.65■■□□□ 1.7
PPP1CA-211ENST00000546202 MAP3K1Q13233 1512 aa25.64■■□□□ 1.7
PPP1CA-211ENST00000546202 ZCCHC11Q5TAX3 1644 aaKnown RBP25.63■■□□□ 1.69
PPP1CA-211ENST00000546202 ATP10BO94823 1461 aa25.63■■□□□ 1.69
PPP1CA-211ENST00000546202 CDK13Q14004 1512 aaKnown RBP25.63■■□□□ 1.69
PPP1CA-211ENST00000546202 TIAM1Q13009 1591 aa25.62■■□□□ 1.69
PPP1CA-211ENST00000546202 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.68
PPP1CA-211ENST00000546202 FAM69CQ0P6D2 419 aa25.57■■□□□ 1.68
PPP1CA-211ENST00000546202 ARID3CA6NKF2 412 aa25.55■■□□□ 1.68
PPP1CA-211ENST00000546202 APLP2Q06481 763 aa25.53■■□□□ 1.68
PPP1CA-211ENST00000546202 MAGI3Q5TCQ9 1506 aa25.5■■□□□ 1.67
PPP1CA-211ENST00000546202 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
PPP1CA-211ENST00000546202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
PPP1CA-211ENST00000546202 HNRNPUL2Q1KMD3 747 aaKnown RBP25.48■■□□□ 1.67
PPP1CA-211ENST00000546202 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
PPP1CA-211ENST00000546202 LRRC9Q6ZRR7 1453 aa25.47■■□□□ 1.67
PPP1CA-211ENST00000546202 CDK11AQ9UQ88 783 aaPredicted RBP25.46■■□□□ 1.67
PPP1CA-211ENST00000546202 MAPKBP1O60336 1514 aa25.46■■□□□ 1.67
PPP1CA-211ENST00000546202 KDM4FA0A1W2PPD8 638 aa25.45■■□□□ 1.66
PPP1CA-211ENST00000546202 EHBP1L1Q8N3D4 1523 aa25.45■■□□□ 1.66
PPP1CA-211ENST00000546202 KANK4Q5T7N3 995 aaPredicted RBP25.43■■□□□ 1.66
PPP1CA-211ENST00000546202 TROQ12816 1431 aaPredicted RBP25.43■■□□□ 1.66
PPP1CA-211ENST00000546202 PLEKHD1A6NEE1 506 aa25.42■■□□□ 1.66
PPP1CA-211ENST00000546202 ASXL2Q76L83 1435 aa25.42■■□□□ 1.66
PPP1CA-211ENST00000546202 MTUS2Q5JR59 1369 aa25.42■■□□□ 1.66
PPP1CA-211ENST00000546202 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
PPP1CA-211ENST00000546202 SUPT6HQ7KZ85 1726 aaKnown RBP25.37■■□□□ 1.65
PPP1CA-211ENST00000546202 KIF14Q15058 1648 aa25.35■■□□□ 1.65
PPP1CA-211ENST00000546202 DIP2BQ9P265 1576 aa25.33■■□□□ 1.65
PPP1CA-211ENST00000546202 PPARGC1BQ86YN6 1023 aaKnown RBP25.3■■□□□ 1.64
PPP1CA-211ENST00000546202 NCOA2Q15596 1464 aa25.28■■□□□ 1.64
PPP1CA-211ENST00000546202 ILDR1Q86SU0 546 aaPredicted RBP25.27■■□□□ 1.64
PPP1CA-211ENST00000546202 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.27■■□□□ 1.64
PPP1CA-211ENST00000546202 ABCA9Q8IUA7 1624 aa25.26■■□□□ 1.63
PPP1CA-211ENST00000546202 KCNH8Q96L42 1107 aa25.25■■□□□ 1.63
PPP1CA-211ENST00000546202 KDM6BO15054 1643 aa25.25■■□□□ 1.63
PPP1CA-211ENST00000546202 GLI2P10070 1586 aa25.24■■□□□ 1.63
PPP1CA-211ENST00000546202 TTC37Q6PGP7 1564 aa25.24■■□□□ 1.63
PPP1CA-211ENST00000546202 CDC42BPAQ5VT25 1732 aa25.21■■□□□ 1.63
PPP1CA-211ENST00000546202 MYO5CQ9NQX4 1742 aa25.19■■□□□ 1.62
PPP1CA-211ENST00000546202 ITSN2Q9NZM3 1697 aa25.19■■□□□ 1.62
PPP1CA-211ENST00000546202 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
PPP1CA-211ENST00000546202 TSPOAP1O95153 1857 aa25.17■■□□□ 1.62
PPP1CA-211ENST00000546202 PREX2Q70Z35 1606 aa25.16■■□□□ 1.62
PPP1CA-211ENST00000546202 MAP3K4Q9Y6R4 1608 aa25.16■■□□□ 1.62
PPP1CA-211ENST00000546202 GPATCH8Q9UKJ3 1502 aaKnown RBP25.16■■□□□ 1.62
PPP1CA-211ENST00000546202 CCNB3Q8WWL7 1395 aa25.15■■□□□ 1.62
PPP1CA-211ENST00000546202 CDC42BPBQ9Y5S2 1711 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms