RNA–Protein interactions for RNA: ENST00000545827.6

LMF1-203, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 2,731 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-203ENST00000545827 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
LMF1-203ENST00000545827 ARHGAP35Q9NRY4 1499 aa22.7■■□□□ 1.22
LMF1-203ENST00000545827 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
LMF1-203ENST00000545827 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
LMF1-203ENST00000545827 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
LMF1-203ENST00000545827 SETD5Q9C0A6 1442 aa22.67■■□□□ 1.22
LMF1-203ENST00000545827 ANP32CO43423 234 aa22.66■■□□□ 1.22
LMF1-203ENST00000545827 PPP1R15AO75807 674 aaPredicted RBP22.65■■□□□ 1.22
LMF1-203ENST00000545827 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
LMF1-203ENST00000545827 CCER2I3L3R5 266 aa22.58■■□□□ 1.21
LMF1-203ENST00000545827 DAXXQ9UER7 740 aaPredicted RBP22.58■■□□□ 1.21
LMF1-203ENST00000545827 HMGXB3Q12766 1538 aa22.58■■□□□ 1.2
LMF1-203ENST00000545827 CUX1P39880 1505 aa22.57■■□□□ 1.2
LMF1-203ENST00000545827 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
LMF1-203ENST00000545827 TIAM1Q13009 1591 aa22.54■■□□□ 1.2
LMF1-203ENST00000545827 PHLDB1Q86UU1 1377 aa22.53■■□□□ 1.2
LMF1-203ENST00000545827 MSH5O43196 834 aa22.5■■□□□ 1.19
LMF1-203ENST00000545827 IRX6P78412 446 aaPredicted RBP22.48■■□□□ 1.19
LMF1-203ENST00000545827 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
LMF1-203ENST00000545827 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
LMF1-203ENST00000545827 ERICH6Q7L0X2 663 aa22.46■■□□□ 1.19
LMF1-203ENST00000545827 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
LMF1-203ENST00000545827 HNRNPUQ00839 825 aaKnown RBP eCLIP22.44■■□□□ 1.18
LMF1-203ENST00000545827 CFTRP13569 1480 aa22.42■■□□□ 1.18
LMF1-203ENST00000545827 TONSLQ96HA7 1378 aa22.42■■□□□ 1.18
LMF1-203ENST00000545827 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
LMF1-203ENST00000545827 MAP3K1Q13233 1512 aa22.4■■□□□ 1.18
LMF1-203ENST00000545827 IGF1RP08069 1367 aa22.36■■□□□ 1.17
LMF1-203ENST00000545827 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
LMF1-203ENST00000545827 FANCIQ9NVI1 1328 aa22.33■■□□□ 1.16
LMF1-203ENST00000545827 CARMIL1Q5VZK9 1371 aa22.32■■□□□ 1.16
LMF1-203ENST00000545827 FHAD1B1AJZ9 1412 aa22.32■■□□□ 1.16
LMF1-203ENST00000545827 PCF11O94913 1555 aaKnown RBP22.28■■□□□ 1.16
LMF1-203ENST00000545827 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
LMF1-203ENST00000545827 CFAP43Q8NDM7 1665 aa22.25■■□□□ 1.15
LMF1-203ENST00000545827 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
LMF1-203ENST00000545827 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
LMF1-203ENST00000545827 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
LMF1-203ENST00000545827 PPP4R2Q9NY27 417 aa22.16■■□□□ 1.14
LMF1-203ENST00000545827 NCBP3Q53F19 620 aaKnown RBP22.15■■□□□ 1.14
LMF1-203ENST00000545827 NESP48681 1621 aa22.14■■□□□ 1.13
LMF1-203ENST00000545827 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
LMF1-203ENST00000545827 FGD6Q6ZV73 1430 aa22.13■■□□□ 1.13
LMF1-203ENST00000545827 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
LMF1-203ENST00000545827 WASHC2AQ641Q2 1341 aa22.13■■□□□ 1.13
LMF1-203ENST00000545827 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
LMF1-203ENST00000545827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
LMF1-203ENST00000545827 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
LMF1-203ENST00000545827 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
LMF1-203ENST00000545827 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
LMF1-203ENST00000545827 CCDC184Q52MB2 194 aa22.1■■□□□ 1.13
LMF1-203ENST00000545827 PRDM2Q13029 1718 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 ERICH6BQ5W0A0 696 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 HFM1A2PYH4 1435 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 PTPRKQ15262 1439 aa22.08■■□□□ 1.13
LMF1-203ENST00000545827 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
LMF1-203ENST00000545827 CASKIN1Q8WXD9 1431 aa22.07■■□□□ 1.12
LMF1-203ENST00000545827 PTPN23Q9H3S7 1636 aa22.05■■□□□ 1.12
LMF1-203ENST00000545827 DEKP35659 375 aaKnown RBP22.05■■□□□ 1.12
LMF1-203ENST00000545827 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
LMF1-203ENST00000545827 MRS2Q9HD23 443 aa22.03■■□□□ 1.12
LMF1-203ENST00000545827 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
LMF1-203ENST00000545827 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
LMF1-203ENST00000545827 NAIPQ13075 1403 aa22.02■■□□□ 1.11
LMF1-203ENST00000545827 NBR1Q14596 966 aa22.01■■□□□ 1.11
LMF1-203ENST00000545827 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
LMF1-203ENST00000545827 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
LMF1-203ENST00000545827 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
LMF1-203ENST00000545827 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
LMF1-203ENST00000545827 CNTLNQ9NXG0 1405 aa21.98■■□□□ 1.11
LMF1-203ENST00000545827 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
LMF1-203ENST00000545827 EFCAB5A4FU69 1503 aa21.97■■□□□ 1.11
LMF1-203ENST00000545827 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
LMF1-203ENST00000545827 NOP58Q9Y2X3 529 aaKnown RBP21.96■■□□□ 1.11
LMF1-203ENST00000545827 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
LMF1-203ENST00000545827 CNGB1Q14028 1251 aaPredicted RBP21.93■■□□□ 1.1
LMF1-203ENST00000545827 C11orf95C9JLR9 678 aaPredicted RBP21.92■■□□□ 1.1
LMF1-203ENST00000545827 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
LMF1-203ENST00000545827 MYOM3Q5VTT5 1437 aa21.91■■□□□ 1.1
LMF1-203ENST00000545827 PAK3O75914 559 aaPredicted RBP21.9■■□□□ 1.1
LMF1-203ENST00000545827 PRKCSHP14314 528 aaPredicted RBP21.88■■□□□ 1.09
LMF1-203ENST00000545827 TOPBP1Q92547 1522 aa21.88■■□□□ 1.09
LMF1-203ENST00000545827 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
LMF1-203ENST00000545827 CCDC7Q96M83 1385 aa21.88■■□□□ 1.09
LMF1-203ENST00000545827 FOXD1Q16676 465 aa21.87■■□□□ 1.09
LMF1-203ENST00000545827 SNAPC4Q5SXM2 1469 aa21.87■■□□□ 1.09
LMF1-203ENST00000545827 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
LMF1-203ENST00000545827 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
LMF1-203ENST00000545827 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 NCOA1Q15788 1441 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 SENP3-EIF4A1A0A087X0R7 540 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 CCDC136Q96JN2 1154 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 AKNAQ7Z591 1439 aa21.82■■□□□ 1.08
LMF1-203ENST00000545827 ANP32AP39687 249 aaKnown RBP21.81■■□□□ 1.08
LMF1-203ENST00000545827 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
LMF1-203ENST00000545827 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
LMF1-203ENST00000545827 URB2Q14146 1524 aaKnown RBP21.79■■□□□ 1.08
LMF1-203ENST00000545827 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
LMF1-203ENST00000545827 DENND4BO75064 1496 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms