RNA–Protein interactions for RNA: ENST00000545399.5

ATP1A3-208, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATP1A3, Length 3,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-208ENST00000545399 CFTRP13569 1480 aa17.17■□□□□ 0.34
ATP1A3-208ENST00000545399 CCNB3Q8WWL7 1395 aa17.17■□□□□ 0.34
ATP1A3-208ENST00000545399 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
ATP1A3-208ENST00000545399 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
ATP1A3-208ENST00000545399 BCANQ96GW7 911 aa17.13■□□□□ 0.33
ATP1A3-208ENST00000545399 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
ATP1A3-208ENST00000545399 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
ATP1A3-208ENST00000545399 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
ATP1A3-208ENST00000545399 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
ATP1A3-208ENST00000545399 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
ATP1A3-208ENST00000545399 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
ATP1A3-208ENST00000545399 FOXD1Q16676 465 aa17.04■□□□□ 0.32
ATP1A3-208ENST00000545399 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
ATP1A3-208ENST00000545399 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.32
ATP1A3-208ENST00000545399 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
ATP1A3-208ENST00000545399 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
ATP1A3-208ENST00000545399 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
ATP1A3-208ENST00000545399 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
ATP1A3-208ENST00000545399 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
ATP1A3-208ENST00000545399 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATP1A3-208ENST00000545399 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
ATP1A3-208ENST00000545399 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
ATP1A3-208ENST00000545399 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
ATP1A3-208ENST00000545399 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
ATP1A3-208ENST00000545399 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
ATP1A3-208ENST00000545399 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
ATP1A3-208ENST00000545399 ERICH3Q5RHP9 1530 aa16.88■□□□□ 0.29
ATP1A3-208ENST00000545399 BIVM-ERCC5R4GMW8 1640 aa16.86■□□□□ 0.29
ATP1A3-208ENST00000545399 ANP32CO43423 234 aa16.85■□□□□ 0.29
ATP1A3-208ENST00000545399 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
ATP1A3-208ENST00000545399 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
ATP1A3-208ENST00000545399 ZNF644Q9H582 1327 aaPredicted RBP16.82■□□□□ 0.28
ATP1A3-208ENST00000545399 LRRC9Q6ZRR7 1453 aa16.81■□□□□ 0.28
ATP1A3-208ENST00000545399 KDM2AQ9Y2K7 1162 aa16.79■□□□□ 0.28
ATP1A3-208ENST00000545399 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
ATP1A3-208ENST00000545399 IRX6P78412 446 aaPredicted RBP16.78■□□□□ 0.28
ATP1A3-208ENST00000545399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
ATP1A3-208ENST00000545399 NEFLP07196 543 aa16.77■□□□□ 0.27
ATP1A3-208ENST00000545399 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
ATP1A3-208ENST00000545399 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
ATP1A3-208ENST00000545399 CFDP1Q9UEE9 299 aaPredicted RBP16.75■□□□□ 0.27
ATP1A3-208ENST00000545399 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
ATP1A3-208ENST00000545399 FKBP8Q14318 412 aa16.74■□□□□ 0.27
ATP1A3-208ENST00000545399 FMN1Q68DA7 1419 aa16.74■□□□□ 0.27
ATP1A3-208ENST00000545399 CLSPNQ9HAW4 1339 aa16.73■□□□□ 0.27
ATP1A3-208ENST00000545399 FAM9BQ8IZU0 186 aa16.73■□□□□ 0.27
ATP1A3-208ENST00000545399 PPP1R15AO75807 674 aaPredicted RBP16.71■□□□□ 0.27
ATP1A3-208ENST00000545399 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
ATP1A3-208ENST00000545399 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATP1A3-208ENST00000545399 PCF11O94913 1555 aaKnown RBP16.69■□□□□ 0.26
ATP1A3-208ENST00000545399 TIAM1Q13009 1591 aa16.69■□□□□ 0.26
ATP1A3-208ENST00000545399 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
ATP1A3-208ENST00000545399 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
ATP1A3-208ENST00000545399 SALL2Q9Y467 1007 aaPredicted RBP16.65■□□□□ 0.26
ATP1A3-208ENST00000545399 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
ATP1A3-208ENST00000545399 FGD6Q6ZV73 1430 aa16.65■□□□□ 0.26
ATP1A3-208ENST00000545399 PLEKHD1A6NEE1 506 aa16.64■□□□□ 0.25
ATP1A3-208ENST00000545399 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
ATP1A3-208ENST00000545399 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
ATP1A3-208ENST00000545399 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
ATP1A3-208ENST00000545399 L3MBTL2Q969R5 705 aa16.63■□□□□ 0.25
ATP1A3-208ENST00000545399 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
ATP1A3-208ENST00000545399 CASKIN1Q8WXD9 1431 aa16.61■□□□□ 0.25
ATP1A3-208ENST00000545399 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
ATP1A3-208ENST00000545399 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATP1A3-208ENST00000545399 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
ATP1A3-208ENST00000545399 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
ATP1A3-208ENST00000545399 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
ATP1A3-208ENST00000545399 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATP1A3-208ENST00000545399 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.25
ATP1A3-208ENST00000545399 CDK13Q14004 1512 aaKnown RBP16.58■□□□□ 0.25
ATP1A3-208ENST00000545399 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
ATP1A3-208ENST00000545399 PTPRKQ15262 1439 aa16.56■□□□□ 0.24
ATP1A3-208ENST00000545399 PKD2Q13563 968 aa16.55■□□□□ 0.24
ATP1A3-208ENST00000545399 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
ATP1A3-208ENST00000545399 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
ATP1A3-208ENST00000545399 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.24
ATP1A3-208ENST00000545399 PRDM2Q13029 1718 aa16.52■□□□□ 0.23
ATP1A3-208ENST00000545399 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
ATP1A3-208ENST00000545399 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
ATP1A3-208ENST00000545399 MAPKBP1O60336 1514 aa16.47■□□□□ 0.23
ATP1A3-208ENST00000545399 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
ATP1A3-208ENST00000545399 DCAF11Q8TEB1 546 aa16.46■□□□□ 0.23
ATP1A3-208ENST00000545399 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
ATP1A3-208ENST00000545399 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
ATP1A3-208ENST00000545399 MRC2Q9UBG0 1479 aa16.44■□□□□ 0.22
ATP1A3-208ENST00000545399 NAIPQ13075 1403 aa16.43■□□□□ 0.22
ATP1A3-208ENST00000545399 CCDC184Q52MB2 194 aa16.43■□□□□ 0.22
ATP1A3-208ENST00000545399 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
ATP1A3-208ENST00000545399 NBPF8Q3BBV2 869 aa16.42■□□□□ 0.22
ATP1A3-208ENST00000545399 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
ATP1A3-208ENST00000545399 NUP155O75694 1391 aa16.41■□□□□ 0.22
ATP1A3-208ENST00000545399 PLB1Q6P1J6 1458 aa16.41■□□□□ 0.22
ATP1A3-208ENST00000545399 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
ATP1A3-208ENST00000545399 UACAQ9BZF9 1416 aa16.39■□□□□ 0.21
ATP1A3-208ENST00000545399 C11orf95C9JLR9 678 aaPredicted RBP16.39■□□□□ 0.21
ATP1A3-208ENST00000545399 EPRSP07814 1512 aaKnown RBP16.39■□□□□ 0.21
ATP1A3-208ENST00000545399 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
ATP1A3-208ENST00000545399 TIMELESSQ9UNS1 1208 aa16.37■□□□□ 0.21
ATP1A3-208ENST00000545399 CUL7Q14999 1698 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms